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BRAIN CEREBELLUM Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Cerebellum
CEREBELLUM - Expression summary
Protein expression
Cerebellumi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Cells in granular layer: Not detected
Cells in molecular layer: Not detected
Purkinje cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:1171.0 nTPM
HPA Brain:752.0 nTPM
GTEx:1171.0 nTPM
FANTOM5:184.5 Scaled Tags Per Million
Pig:198.5 nTPM
Mouse:981.1 nTPM
Allen mouse:3.7 Expression energy

CEREBELLUM - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA049719
Purkinje cells Not detected
Cells in granular layer Not detected
Cells in molecular layer Not detected



CEREBELLUM - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

752.0
Sample id Sample description nTPM
Cerebellar cortex
nTPM: 693.8
1768 Female, age 72, unknown 931.8
2006 Male, age 61, right hemisphere 737.0
1769 Male, age 76, right hemisphere 720.9
2003 Female, age 85, right hemisphere 694.3
1788 Male, age 55, unknown 686.4
1774 Male, age 80, left hemisphere 611.4
2055 Female, age 91, right hemisphere 607.1
2101 Male, age 74, right hemisphere 561.6
Cerebellar nuclei
nTPM: 752.0
2783 Female, age 72, unknown 947.3
2175 Male, age 61, right hemisphere 919.2
2005 Male, age 80, left hemisphere 768.5
2882 Male, age 76, left hemisphere 768.1
1871 Male, age 74, unknown 748.5
1879 Male, age 55, unknown 722.9
1966 Female, age 91, left hemisphere 704.0
2177 Female, age 85, both hemispheres 612.0
2318 Male, age 74, left hemisphere 577.6
Flocculonodular lobe
nTPM: 639.2
1765 Male, age 55, unknown 806.4
1792 Male, age 74, unknown 679.0
1767 Male, age 76, left hemisphere 663.0
2004 Male, age 61, right hemisphere 630.1
1771 Male, age 80, left hemisphere 620.9
2176 Female, age 91, right hemisphere 591.4
1835 Female, age 85, right hemisphere 483.5
Vermis
nTPM: 584.8
1928 Female, age 72, unknown 681.2
1770 Male, age 76, left hemisphere 673.6
1825 Male, age 74, unknown 669.7
1766 Male, age 55, unknown 662.7
1778 Female, age 91, left hemisphere 615.4
2834 Male, age 80, left hemisphere 570.9
1751 Male, age 74, right hemisphere 485.8
1988 Female, age 85, left hemisphere 480.4
2460 Male, age 61, both hemispheres 423.9

CEREBELLUM - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1171.0
GTEx sample id Sample description nTPM
Brain - Cerebellar Hemisphere
Average nTPM: 1171.0
Samples: 215

Max nTPM: 3135.0
Min nTPM: 575.4
Std nTPM: 334.9
Median nTPM: 1127.4
GTEX-16Z82-0011-R11a-SM-79OKJ 60-69 years, male 3135.0
GTEX-1R9K4-0011-R11a-SM-EZ6N9 60-69 years, male 2331.8
GTEX-NL4W-0011-R11A-SM-2I3DW 50-59 years, male 2291.3
GTEX-1F75W-0011-R11b-SM-AHZ34 60-69 years, male 2262.1
GTEX-132Q8-0011-R11b-SM-5DUW9 60-69 years, male 2171.1
GTEX-1B933-0011-R11a-SM-7P8PM 50-59 years, female 2152.5
GTEX-1LKK1-0011-R11a-SM-EXOIG 50-59 years, female 1990.6
GTEX-13FLV-0011-R11a-SM-5LZZ7 50-59 years, male 1973.4
GTEX-13JUV-0011-R11a-SM-5LZYH 40-49 years, female 1857.7
GTEX-N7MS-0011-R11A-SM-2HMJS 60-69 years, male 1756.4
GTEX-17EVP-0011-R11a-SM-7EWDL 40-49 years, male 1720.5
GTEX-13X6J-0011-R11a-SM-5P9HE 50-59 years, male 1701.4
GTEX-1JJ6O-0011-R11b-SM-EXUS2 60-69 years, male 1701.4
GTEX-1IGQW-0011-R11a-SM-C1YRV 60-69 years, male 1687.6
GTEX-1H3VE-0011-R11b-SM-C1YRP 40-49 years, male 1677.1
GTEX-1CAV2-0011-R11a-SM-ARU8D 40-49 years, female 1623.6
GTEX-1IOXB-0011-R11a-SM-A9G1X 50-59 years, male 1619.2
GTEX-1I19N-0011-R11b-SM-ARU6Y 70-79 years, male 1618.4
GTEX-16NPV-0011-R11a-SM-7IGMK 50-59 years, female 1613.0
GTEX-1313W-0011-R11a-SM-5DUXN 50-59 years, female 1574.4
GTEX-145MI-0011-R11a-SM-5P9JZ 60-69 years, female 1562.5
GTEX-ZF28-0011-R11a-SM-4WWEI 60-69 years, male 1557.8
GTEX-139UW-0011-R11a-SM-5IJGN 60-69 years, male 1534.1
GTEX-1H4P4-0011-R11b-SM-CE6S8 50-59 years, male 1530.0
GTEX-17JCI-0011-R11a-SM-7189Y 60-69 years, female 1527.8
GTEX-11EI6-0011-R11a-SM-DO11V 60-69 years, male 1527.1
GTEX-WL46-0011-R11A-SM-3MJFT 50-59 years, male 1516.9
GTEX-1B8SG-0011-R11a-SM-7P8PF 50-59 years, male 1500.0
GTEX-17EVQ-0011-R11a-SM-7LT9C 70-79 years, male 1489.8
GTEX-13NYS-0011-R11b-SM-5MR4P 60-69 years, male 1451.5
GTEX-1F6I4-0011-R11b-SM-9OSWS 60-69 years, male 1446.7
GTEX-11DZ1-0011-R11b-SM-DO11W 50-59 years, male 1436.4
GTEX-12WSI-0011-R11b-SM-5P9EZ 50-59 years, male 1433.8
GTEX-XMD1-0011-R11A-SM-4AT5J 60-69 years, male 1423.0
GTEX-ZVT3-0011-R11b-SM-57WBI 60-69 years, female 1401.1
GTEX-11ZTS-0011-R11a-SM-DO113 60-69 years, female 1392.3
GTEX-12WSD-0011-R11a-SM-9OSVC 60-69 years, female 1389.1
GTEX-13X6I-0011-R11a-SM-5P9HN 60-69 years, male 1379.0
GTEX-16XZZ-0011-R11a-SM-7EPI3 60-69 years, male 1376.9
GTEX-11ZUS-0011-R11b-SM-5BC7B 30-39 years, male 1370.8
GTEX-16YQH-0011-R11b-SM-7LT98 30-39 years, male 1370.3
GTEX-131XW-0011-R11a-SM-5DUV9 50-59 years, female 1364.6
GTEX-YJ89-0011-R11a-SM-4SOKA 60-69 years, male 1363.9
GTEX-WWYW-0011-R11A-SM-3NB38 50-59 years, female 1358.8
GTEX-1GF9W-0011-R11b-SM-9OSXG 60-69 years, male 1353.8
GTEX-14C39-0011-R11b-SM-5YYAF 40-49 years, male 1341.1
GTEX-1GZHY-0011-R11a-SM-C1YRQ 50-59 years, female 1337.6
GTEX-16GPK-0011-R11b-SM-7MKFF 60-69 years, male 1337.1
GTEX-11EMC-0011-R11b-SM-DNZZK 60-69 years, female 1316.1
GTEX-1J8Q2-0011-R11a-SM-A9SKI 60-69 years, male 1309.1
GTEX-NPJ8-0011-R11A-SM-2YUMS 40-49 years, male 1306.5
GTEX-17F97-0011-R11b-SM-7KFRQ 50-59 years, male 1306.4
GTEX-1HBPI-0011-R11b-SM-CE6SH 50-59 years, male 1300.4
GTEX-1F52S-0011-R11a-SM-CJI23 60-69 years, female 1299.8
GTEX-18A6Q-0011-R11a-SM-72D6H 60-69 years, male 1297.1
GTEX-1GMR8-0011-R11b-SM-9OSX2 50-59 years, female 1296.4
GTEX-13OVJ-0011-R11a-SM-5P9H8 50-59 years, female 1289.8
GTEX-NL3H-0011-R11A-SM-2I3E6 60-69 years, male 1286.9
GTEX-1HGF4-0011-R11a-SM-C1YRR 60-69 years, male 1286.8
GTEX-11WQC-0011-R11b-SM-57WD6 60-69 years, male 1286.1
GTEX-13G51-0011-R11b-SM-5J2NE 60-69 years, male 1284.7
GTEX-11DYG-0011-R11a-SM-DNZZP 60-69 years, male 1282.3
GTEX-11TTK-0011-R11b-SM-DO112 60-69 years, female 1274.2
GTEX-ZE9C-0011-R11a-SM-4WKGG 60-69 years, male 1267.4
GTEX-RU72-0011-R11A-SM-CM2U1 50-59 years, female 1257.7
GTEX-1I1GS-0011-R11a-SM-C1YRU 60-69 years, male 1257.1
GTEX-ZE7O-0011-R11a-SM-57WBC 50-59 years, female 1256.8
GTEX-1CB4G-0011-R11a-SM-9OSWG 60-69 years, male 1256.8
GTEX-13PLJ-0011-R11b-SM-5O9BS 60-69 years, female 1254.0
GTEX-1JMOU-0011-R11b-SM-EXUTA 60-69 years, female 1247.9
GTEX-139TT-0011-R11b-SM-5LZV1 60-69 years, male 1245.1
GTEX-12WSH-0011-R11a-SM-5LZVM 50-59 years, male 1244.9
GTEX-Z93S-0011-R11a-SM-4RGNN 50-59 years, male 1243.2
GTEX-1JJEA-0011-R11a-SM-EXUTE 60-69 years, male 1232.7
GTEX-1F75A-0011-R11a-SM-AHZ35 50-59 years, male 1219.1
GTEX-1GMRU-0011-R11b-SM-C1YQ4 50-59 years, male 1217.3
GTEX-13QIC-0011-R11b-SM-5O9BU 60-69 years, female 1216.1
GTEX-X261-0011-R11A-SM-4E3JY 50-59 years, male 1214.8
GTEX-15DCD-0011-R11a-SM-D4P1R 70-79 years, female 1214.0
GTEX-OHPN-0011-R11A-SM-2I5FM 60-69 years, female 1210.2
GTEX-1KD4Q-0011-R11b-SM-EXOIE 40-49 years, male 1209.3
GTEX-14E7W-0011-R11a-SM-5ZZVA 70-79 years, male 1199.7
GTEX-13FTY-0011-R11a-SM-5IJEA 40-49 years, female 1198.9
GTEX-UTHO-0011-R11A-SM-3GIJE 60-69 years, male 1192.5
GTEX-14ASI-0011-R11b-SM-6AJBJ 60-69 years, male 1191.6
GTEX-X4EP-0011-R11B-SM-4QASK 60-69 years, female 1188.0
GTEX-1HSKV-0011-R11b-SM-AHZ2E 60-69 years, male 1177.3
GTEX-1I1GQ-0011-R11b-SM-CKZPA 50-59 years, male 1175.8
GTEX-N7MT-0011-R11A-SM-2I3DZ 60-69 years, female 1175.4
GTEX-1F7RK-0011-R11b-SM-9QEI2 20-29 years, female 1174.7
GTEX-145MH-0011-R11a-SM-5P9HQ 50-59 years, male 1170.4
GTEX-1F48J-0011-R11b-SM-9OSWV 50-59 years, female 1170.4
GTEX-1ICLZ-0011-R11a-SM-CJI3N 60-69 years, male 1165.4
GTEX-1R9PO-0011-R11b-SM-EZ6NB 60-69 years, female 1159.5
GTEX-1M4P7-0011-R11b-SM-EXOIK 60-69 years, male 1157.6
GTEX-T5JC-0011-R11A-SM-32PMB 20-29 years, male 1156.7
GTEX-17HII-0011-R11b-SM-7KFSX 50-59 years, male 1153.8
GTEX-1LSVX-0011-R11b-SM-EXOIA 60-69 years, male 1151.6
GTEX-1GZ4I-0011-R11b-SM-9OSWR 50-59 years, male 1147.6
GTEX-14PN4-0011-R11a-SM-686ZW 50-59 years, male 1144.6
GTEX-P44H-0011-R11A-SM-2XCER 40-49 years, male 1143.9
GTEX-1LG7Y-0011-R11a-SM-EXOIH 50-59 years, male 1142.8
GTEX-1J1OQ-0011-R11a-SM-A96S3 40-49 years, female 1141.1
GTEX-13CZV-0011-R11b-SM-5N9FN 60-69 years, male 1139.5
GTEX-1H1DG-0011-R11a-SM-C1YQK 70-79 years, male 1137.6
GTEX-1IDJH-0011-R11b-SM-C1YRT 70-79 years, male 1134.6
GTEX-1H3O1-0011-R11a-SM-A96RV 60-69 years, male 1128.1
GTEX-1I1GR-0011-R11a-SM-CM2T5 60-69 years, male 1127.4
GTEX-1C64N-0011-R11b-SM-7P8Q6 50-59 years, male 1124.3
GTEX-15CHQ-0011-R11b-SM-686ZZ 60-69 years, male 1124.2
GTEX-144GL-0011-R11b-SM-5P9F6 50-59 years, male 1115.6
GTEX-1LVAO-0011-R11b-SM-EXOI8 60-69 years, male 1114.8
GTEX-12WSC-0011-R11a-SM-5GU5J 50-59 years, male 1113.0
GTEX-13NZA-0011-R11b-SM-5KM4W 60-69 years, male 1104.7
GTEX-1N2DW-0011-R11b-SM-EXOIL 50-59 years, male 1099.1
GTEX-1IL2U-0011-R11a-SM-CE6SO 60-69 years, male 1094.4
GTEX-12WSF-0011-R11a-SM-5LZVT 70-79 years, male 1092.6
GTEX-13RTJ-0011-R11a-SM-5O9CK 60-69 years, male 1091.2
GTEX-WHSE-0011-R11A-SM-3P5YY 20-29 years, male 1090.7
GTEX-1IY9M-0011-R11b-SM-A96TI 60-69 years, male 1088.6
GTEX-13PVQ-0011-R11a-SM-5O9DU 50-59 years, male 1086.2
GTEX-14E6D-0011-R11b-SM-664NP 50-59 years, male 1084.9
GTEX-1E1VI-0011-R11a-SM-9OSWI 50-59 years, male 1084.3
GTEX-11DXY-0011-R11a-SM-DNZZN 60-69 years, male 1083.9
GTEX-ZVZQ-0011-R11a-SM-51MS6 60-69 years, female 1081.6
GTEX-T2IS-0011-R11A-SM-32QPC 20-29 years, female 1079.2
GTEX-14BIM-0011-R11b-SM-5S2RN 60-69 years, female 1076.2
GTEX-NPJ7-0011-R11A-SM-2I3E8 60-69 years, female 1073.5
GTEX-13FHO-0011-R11b-SM-5LZYQ 60-69 years, male 1072.4
GTEX-1HB9E-0011-R11b-SM-ARU79 50-59 years, male 1069.2
GTEX-1I1HK-0011-R11a-SM-B2LVN 60-69 years, male 1066.6
GTEX-13OVH-0011-R11b-SM-5KM4X 70-79 years, male 1062.6
GTEX-1H1ZS-0011-R11a-SM-C1YQM 70-79 years, male 1053.4
GTEX-13JVG-0011-R11a-SM-5KM53 60-69 years, male 1052.6
GTEX-ZDXO-0011-R11a-SM-4WWD9 60-69 years, male 1051.7
GTEX-ZUA1-0011-R11b-SM-51MTI 40-49 years, male 1047.0
GTEX-11OF3-0011-R11a-SM-57WCR 60-69 years, male 1046.8
GTEX-1H1CY-0011-R11a-SM-C1YQR 60-69 years, female 1042.9
GTEX-13O3Q-0011-R11b-SM-5KM2W 50-59 years, male 1040.2
GTEX-1BAJH-0011-R11b-SM-7IGLM 70-79 years, male 1039.5
GTEX-11H98-0011-R11b-SM-5NQ6U 50-59 years, male 1031.6
GTEX-12ZZZ-0011-R11a-SM-5EGLC 60-69 years, male 1028.9
GTEX-13SLW-0011-R11a-SM-5SI8Q 70-79 years, male 1021.3
GTEX-13SLX-0011-R11b-SM-5O9C8 50-59 years, female 1016.8
GTEX-1HUB1-0011-R11b-SM-CE6SC 60-69 years, male 1013.3
GTEX-15G19-0011-R11b-SM-6LPIH 60-69 years, male 996.2
GTEX-1I1GV-0011-R11a-SM-CJI3Z 60-69 years, male 986.5
GTEX-1B8L1-0011-R11b-SM-793DJ 60-69 years, male 984.5
GTEX-1EKGG-0011-R11a-SM-9QEHZ 60-69 years, male 983.3
GTEX-1H3NZ-0011-R11b-SM-CE6SF 60-69 years, male 982.8
GTEX-18464-0011-R11a-SM-72D76 50-59 years, male 982.2
GTEX-1GTWX-0011-R11b-SM-C1YQJ 60-69 years, male 981.6
GTEX-17HG3-0011-R11b-SM-7KFT4 30-39 years, female 978.5
GTEX-11PRG-0011-R11b-SM-DNZZY 50-59 years, male 975.6
GTEX-1JMQJ-0011-R11a-SM-EXOJY 50-59 years, male 974.4
GTEX-13S7M-0011-R11b-SM-5P9HU 60-69 years, female 973.5
GTEX-1IKOH-0011-R11a-SM-AHZ38 60-69 years, female 965.5
GTEX-14BIN-0011-R11a-SM-5SI79 50-59 years, female 964.6
GTEX-ZAB4-0011-R11a-SM-4SOKI 40-49 years, male 957.4
GTEX-S7SE-0011-R11A-SM-2XCDD 50-59 years, male 941.8
GTEX-183WM-0011-R11a-SM-718A5 70-79 years, female 940.7
GTEX-12WSM-0011-R11a-SM-5DUX8 60-69 years, male 940.6
GTEX-X585-0011-R11B-SM-46MUZ 50-59 years, male 935.8
GTEX-1HCU6-0011-R11b-SM-AHZ2F 60-69 years, female 934.6
GTEX-13OW7-0011-R11a-SM-5O9DY 50-59 years, male 931.8
GTEX-P44G-0011-R11A-SM-2I3FD 30-39 years, male 928.7
GTEX-1N2EE-0011-R11b-SM-EXOIJ 60-69 years, male 920.0
GTEX-13OVL-0011-R11b-SM-5L3G7 50-59 years, male 914.9
GTEX-1EMGI-0011-R11b-SM-9OSWX 60-69 years, male 914.1
GTEX-RVPV-0011-R11A-SM-2TF6F 60-69 years, male 912.6
GTEX-14ABY-0011-R11a-SM-5SI7C 50-59 years, male 904.0
GTEX-14C5O-0011-R11b-SM-6872H 60-69 years, male 902.6
GTEX-1399T-0011-R11a-SM-5J2O1 60-69 years, male 900.1
GTEX-13N2G-0011-R11a-SM-5MR3F 60-69 years, male 899.6
GTEX-1B8SF-0011-R11a-SM-79OOP 60-69 years, male 898.6
GTEX-131XH-0011-R11a-SM-5EGLN 50-59 years, male 896.3
GTEX-13X6K-0011-R11a-SM-5P9F5 60-69 years, female 895.1
GTEX-13O3O-0011-R11b-SM-5KM4G 60-69 years, female 892.2
GTEX-11GSP-0011-R11b-SM-5NQ7V 60-69 years, female 890.8
GTEX-13OW6-0011-R11a-SM-5L3H2 50-59 years, male 886.5
GTEX-13VXU-0011-R11b-SM-5O9DJ 50-59 years, male 884.3
GTEX-YFC4-0011-R11a-SM-4SOK6 40-49 years, female 884.0
GTEX-1A3MX-0011-R11b-SM-7DUGP 60-69 years, male 883.9
GTEX-18465-0011-R11a-SM-72D78 50-59 years, male 882.9
GTEX-13OW8-0011-R11a-SM-5L3GT 60-69 years, male 880.0
GTEX-1GN73-0011-R11b-SM-9OSX4 60-69 years, male 879.2
GTEX-Y8DK-0011-R11A-SM-4SOK2 60-69 years, male 876.2
GTEX-1AX9I-0011-R11b-SM-7DHN4 60-69 years, male 872.9
GTEX-12126-0011-R11a-SM-5BC6X 20-29 years, male 872.1
GTEX-15ER7-0011-R11a-SM-6LPIL 20-29 years, female 871.2
GTEX-15EO6-0011-R11b-SM-6M47M 50-59 years, male 863.0
GTEX-1IKK5-0011-R11a-SM-C1YRX 60-69 years, male 845.9
GTEX-1J8EW-0011-R11a-SM-AHZ37 60-69 years, female 843.8
GTEX-WZTO-0011-R11A-SM-4E3K9 40-49 years, male 842.1
GTEX-15DYW-0011-R11a-SM-6LPIT 60-69 years, female 836.3
GTEX-1HFI6-0011-R11b-SM-A96RU 40-49 years, male 822.8
GTEX-13FHP-0011-R11b-SM-5LZXP 50-59 years, male 821.4
GTEX-TSE9-0011-R11A-SM-3DB7N 60-69 years, female 818.9
GTEX-QMR6-0011-R11A-SM-32PKK 50-59 years, male 814.8
GTEX-131YS-0011-R11b-SM-5EGLM 60-69 years, female 798.3
GTEX-13OW5-0011-R11b-SM-5L3GG 60-69 years, male 774.1
GTEX-13NYB-0011-R11a-SM-5KM3Q 40-49 years, male 772.9
GTEX-13FXS-0011-R11a-SM-5L3DM 50-59 years, male 767.6
GTEX-12ZZX-0011-R11a-SM-5DUVJ 40-49 years, female 749.8
GTEX-13CF2-0011-R11b-SM-5LZXO 60-69 years, male 747.9
GTEX-WVLH-0011-R11A-SM-3MJFO 50-59 years, male 741.4
GTEX-12WSE-0011-R11b-SM-5P9JW 20-29 years, male 735.5
GTEX-1IL2V-0011-R11a-SM-ARU6T 70-79 years, male 704.1
GTEX-14DAQ-0011-R11a-SM-664NO 60-69 years, female 700.6
GTEX-QDT8-0011-R11A-SM-32PKD 30-39 years, female 692.7
GTEX-X4XX-0011-R11A-SM-46MWQ 60-69 years, male 684.8
GTEX-T6MN-0011-R11A-SM-32QOX 50-59 years, male 654.6
GTEX-145LU-0011-R11b-SM-5P9JX 50-59 years, male 635.4
GTEX-Q2AG-0011-R11A-SM-2HMKZ 40-49 years, female 630.7
GTEX-R55E-0011-R11A-SM-2TC6I 20-29 years, male 575.4
Show allShow less
Brain - Cerebellum
Average nTPM: 1021.7
Samples: 241

Max nTPM: 1822.1
Min nTPM: 672.7
Std nTPM: 172.0
Median nTPM: 1012.5
GTEX-Y111-2826-SM-4TT3O 50-59 years, male 1822.1
GTEX-13OVJ-2726-SM-5IJG6 50-59 years, female 1584.6
GTEX-1H3VE-2826-SM-9WPOL 40-49 years, male 1533.8
GTEX-NPJ8-2626-SM-2D7W2 40-49 years, male 1474.1
GTEX-XMD1-2826-SM-4AT5F 60-69 years, male 1457.1
GTEX-1GF9W-2726-SM-9JGGW 60-69 years, male 1453.1
GTEX-1F48J-2726-SM-7P8PW 50-59 years, female 1452.5
GTEX-1EH9U-3126-SM-7MXU5 60-69 years, male 1394.8
GTEX-1F75W-3126-SM-7P8SJ 60-69 years, male 1388.6
GTEX-1RNSC-3126-SM-EVR4V 60-69 years, male 1385.4
GTEX-1BAJH-3126-SM-7MGXY 70-79 years, male 1383.8
GTEX-1HB9E-3126-SM-AHZ4M 50-59 years, male 1348.0
GTEX-1JMQJ-3126-SM-EV79G 50-59 years, male 1337.5
GTEX-1JN1M-3126-SM-AHZ4E 60-69 years, female 1332.5
GTEX-1F6I4-3026-SM-7P8SI 60-69 years, male 1330.0
GTEX-1B8SG-1926-SM-73KUB 50-59 years, male 1329.6
GTEX-13RTJ-3126-SM-5S2Q4 60-69 years, male 1327.4
GTEX-14E6D-2926-SM-664OP 50-59 years, male 1316.5
GTEX-PWO3-1026-SM-2I5F2 60-69 years, female 1291.0
GTEX-WWYW-3026-SM-3NB36 50-59 years, female 1282.9
GTEX-16Z82-2926-SM-6LPJJ 60-69 years, male 1282.4
GTEX-1RDX4-3226-SM-DPS14 50-59 years, female 1281.7
GTEX-1MJK2-3026-SM-EV7A5 50-59 years, male 1265.9
GTEX-1QEPI-3026-SM-EXOIW 60-69 years, female 1219.7
GTEX-X261-3126-SM-4PQZC 50-59 years, male 1218.6
GTEX-1C6WA-3326-SM-7MKGN 60-69 years, male 1214.6
GTEX-WL46-2826-SM-3LK81 50-59 years, male 1199.5
GTEX-T5JC-2326-SM-32PMR 20-29 years, male 1198.7
GTEX-13O3Q-3026-SM-5IJGD 50-59 years, male 1192.8
GTEX-11O72-2826-SM-5HL6W 40-49 years, male 1179.8
GTEX-ZF28-2926-SM-4WKG1 60-69 years, male 1172.1
GTEX-1CB4G-2926-SM-7MKFQ 60-69 years, male 1171.8
GTEX-16XZZ-2926-SM-6LPK4 60-69 years, male 1171.5
GTEX-1H1ZS-2926-SM-9WPP2 70-79 years, male 1170.7
GTEX-N7MT-1226-SM-DKPOK 60-69 years, female 1169.3
GTEX-13OW7-2926-SM-5MR3Z 50-59 years, male 1166.7
GTEX-1128S-2826-SM-5N9DI 60-69 years, female 1162.7
GTEX-1F75A-2926-SM-7MXVN 50-59 years, male 1161.1
GTEX-11DXY-3126-SM-5N9BT 60-69 years, male 1160.5
GTEX-1E1VI-2926-SM-7IGLT 50-59 years, male 1160.1
GTEX-11ZUS-2826-SM-5EQKW 30-39 years, male 1149.2
GTEX-13FHO-2926-SM-5L3ES 60-69 years, male 1145.0
GTEX-1313W-3026-SM-5LZUZ 50-59 years, female 1142.1
GTEX-14BIM-3126-SM-5Q5C7 60-69 years, female 1139.7
GTEX-1H3O1-1826-SM-A96TO 60-69 years, male 1136.6
GTEX-147GR-3126-SM-5S2PM 60-69 years, male 1135.3
GTEX-1GTWX-2926-SM-7MXV4 60-69 years, male 1135.0
GTEX-1I1CD-2926-SM-A96SJ 60-69 years, female 1133.2
GTEX-13G51-3126-SM-5IJG7 60-69 years, male 1129.5
GTEX-1E2YA-2926-SM-7MGWX 50-59 years, male 1128.9
GTEX-12WSM-2126-SM-5GCOC 60-69 years, male 1124.4
GTEX-145MG-3126-SM-5Q5D3 50-59 years, male 1124.4
GTEX-15DYW-3026-SM-7KFRM 60-69 years, female 1120.8
GTEX-1C6VR-3026-SM-7IGLW 60-69 years, male 1120.1
GTEX-1399T-3126-SM-5IJFS 60-69 years, male 1117.3
GTEX-1IKOH-2826-SM-CNNRC 60-69 years, female 1109.2
GTEX-R55E-2526-SM-2TC6H 20-29 years, male 1106.6
GTEX-ZYFD-2926-SM-5GID9 50-59 years, male 1106.5
GTEX-18A6Q-2826-SM-7LTAO 60-69 years, male 1105.9
GTEX-13112-2926-SM-5DUWT 50-59 years, male 1105.2
GTEX-131YS-3026-SM-5EGHY 60-69 years, female 1102.8
GTEX-12ZZZ-3126-SM-5LZU6 60-69 years, male 1099.9
GTEX-1LSVX-2826-SM-EVR58 60-69 years, male 1099.7
GTEX-11TTK-2826-SM-5GU5K 60-69 years, female 1097.4
GTEX-11DZ1-2926-SM-5A5KI 50-59 years, male 1096.8
GTEX-1192X-3226-SM-5987D 50-59 years, male 1095.9
GTEX-1R9PO-2826-SM-E6CPV 60-69 years, female 1095.0
GTEX-1PWST-3026-SM-EAZ3H 70-79 years, male 1094.2
GTEX-1HBPI-2726-SM-9WPPF 50-59 years, male 1093.4
GTEX-1B933-3026-SM-731DB 50-59 years, female 1093.2
GTEX-14JIY-2326-SM-6AJAJ 60-69 years, male 1092.7
GTEX-XLM4-2926-SM-4AT59 60-69 years, male 1092.1
GTEX-13SLX-3226-SM-5YYA6 50-59 years, female 1090.4
GTEX-1GF9V-3026-SM-7P8R8 60-69 years, male 1088.4
GTEX-UTHO-2926-SM-3P5Z9 60-69 years, male 1088.3
GTEX-16YQH-2926-SM-6LPJE 30-39 years, male 1087.5
GTEX-1KD4Q-3026-SM-EV7A7 40-49 years, male 1086.9
GTEX-15SHU-3026-SM-6LPIB 40-49 years, female 1083.0
GTEX-1H4P4-2726-SM-9JGGB 50-59 years, male 1078.8
GTEX-1B8L1-3226-SM-7P8OX 60-69 years, male 1078.5
GTEX-1F6IF-3026-SM-7P8QN 60-69 years, male 1074.9
GTEX-1JJ6O-3026-SM-C1YQH 60-69 years, male 1073.3
GTEX-1EWIQ-3026-SM-7IGOJ 70-79 years, female 1067.6
GTEX-QVUS-2926-SM-3GIJB 60-69 years, female 1062.4
GTEX-1GZHY-3026-SM-7MXVA 50-59 years, female 1060.6
GTEX-ZAK1-2926-SM-5HL9S 50-59 years, female 1059.6
GTEX-13PVQ-2926-SM-5L3HJ 50-59 years, male 1058.1
GTEX-1A8G7-3026-SM-73KTT 60-69 years, male 1057.8
GTEX-13QIC-3026-SM-5LU58 60-69 years, female 1057.1
GTEX-13X6I-2926-SM-5Q5C3 60-69 years, male 1055.4
GTEX-13JUV-3026-SM-5K7WX 40-49 years, female 1055.0
GTEX-17HG3-2826-SM-7EPGO 30-39 years, female 1050.6
GTEX-X4EP-3026-SM-3P5YP 60-69 years, female 1049.2
GTEX-QVJO-1325-SM-2S1QX 60-69 years, female 1048.8
GTEX-1NV8Z-3026-SM-DTX8Z 60-69 years, male 1048.0
GTEX-11EI6-2926-SM-5985U 60-69 years, male 1045.2
GTEX-17F97-2926-SM-7DUEQ 50-59 years, male 1044.7
GTEX-14BIN-3326-SM-5Q5E6 50-59 years, female 1044.6
GTEX-183WM-2726-SM-7KFRF 70-79 years, female 1044.5
GTEX-13N2G-3126-SM-5IJGL 60-69 years, male 1040.1
GTEX-YFC4-3026-SM-5IFJK 40-49 years, female 1039.4
GTEX-N7MS-2526-SM-2D7W3 60-69 years, male 1037.7
GTEX-1HBPH-3026-SM-9WPNY 40-49 years, female 1035.4
GTEX-1R46S-3126-SM-DPRZ9 60-69 years, female 1031.8
GTEX-12ZZY-2926-SM-5DUXO 60-69 years, male 1031.6
GTEX-NPJ7-2826-SM-2I3FU 60-69 years, female 1031.1
GTEX-T2IS-2926-SM-32QPO 20-29 years, female 1030.6
GTEX-13FHP-2926-SM-5IJG9 50-59 years, male 1029.2
GTEX-T6MN-2526-SM-32PMN 50-59 years, male 1026.3
GTEX-13OW5-3126-SM-5MR3Y 60-69 years, male 1024.5
GTEX-ZAB4-2926-SM-57WCV 40-49 years, male 1022.8
GTEX-11GSP-3126-SM-5A5LL 60-69 years, female 1022.2
GTEX-1RQEC-3026-SM-DPRXM 60-69 years, male 1022.2
GTEX-14A5I-2826-SM-5SIBF 50-59 years, female 1021.3
GTEX-Z93S-2826-SM-57WBL 50-59 years, male 1020.5
GTEX-12WSE-2926-SM-5RQJ9 20-29 years, male 1019.8
GTEX-ZDXO-2926-SM-4WKFM 60-69 years, male 1018.8
GTEX-1EX96-3126-SM-9JGGC 50-59 years, male 1018.3
GTEX-13OW6-2926-SM-5KM29 50-59 years, male 1014.5
GTEX-1HSKV-2926-SM-B2LWJ 60-69 years, male 1013.5
GTEX-1LG7Y-3126-SM-EV7AS 50-59 years, male 1012.5
GTEX-111FC-3326-SM-5GZYV 60-69 years, male 1011.2
GTEX-WVLH-2926-SM-3MJG5 50-59 years, male 1009.9
GTEX-1J1OQ-3126-SM-D4P2O 40-49 years, female 1006.5
GTEX-15ER7-3026-SM-6M47W 20-29 years, female 1001.9
GTEX-131XH-2926-SM-5LZU4 50-59 years, male 999.1
GTEX-13OVL-3026-SM-5IJF1 50-59 years, male 998.3
GTEX-13VXU-3026-SM-5LU3K 50-59 years, male 995.6
GTEX-ZZPT-2926-SM-5EQ5S 50-59 years, male 995.0
GTEX-132Q8-2926-SM-5IFFP 60-69 years, male 992.2
GTEX-1QP6S-3026-SM-EAZ4N 40-49 years, male 990.7
GTEX-ZYY3-3026-SM-5GIEJ 60-69 years, female 989.4
GTEX-14PN4-3026-SM-664O4 50-59 years, male 988.9
GTEX-1269C-3126-SM-5EGI6 60-69 years, female 988.3
GTEX-ZVT3-2926-SM-5GU6M 60-69 years, female 986.8
GTEX-P44G-2526-SM-2I5EK 30-39 years, male 986.6
GTEX-OHPN-2626-SM-2I5H1 60-69 years, female 986.4
GTEX-1PIIG-2826-SM-DTX7O 30-39 years, male 986.1
GTEX-1HSMO-2926-SM-C1YR5 60-69 years, male 980.7
GTEX-15G19-2826-SM-6M48K 60-69 years, male 978.2
GTEX-1A3MX-2926-SM-718B7 60-69 years, male 977.1
GTEX-1KANB-3226-SM-D4P3G 50-59 years, male 977.1
GTEX-14C39-3026-SM-5S2QE 40-49 years, male 974.3
GTEX-13S7M-3026-SM-5S2QQ 60-69 years, female 974.1
GTEX-1H1CY-3026-SM-9OSW7 60-69 years, female 973.8
GTEX-14ABY-3026-SM-664NE 50-59 years, male 971.0
GTEX-13JVG-3226-SM-5IJGJ 60-69 years, male 970.9
GTEX-1IDJH-3126-SM-C1YQS 70-79 years, male 970.2
GTEX-11GSO-3026-SM-5Q5AL 60-69 years, male 968.7
GTEX-1JMQK-2926-SM-D4P2T 60-69 years, male 968.4
GTEX-11DYG-2926-SM-5H132 60-69 years, male 967.5
GTEX-17JCI-3026-SM-7EWDR 60-69 years, female 966.7
GTEX-YJ89-2926-SM-5P9IT 60-69 years, male 965.4
GTEX-18465-2926-SM-7KFSE 50-59 years, male 961.0
GTEX-15EO6-2926-SM-6M48D 50-59 years, male 959.2
GTEX-11ZTS-3226-SM-5EGID 60-69 years, female 958.5
GTEX-11EMC-3326-SM-5P9JH 60-69 years, female 957.6
GTEX-11ZVC-3026-SM-59HJM 50-59 years, female 957.4
GTEX-14E7W-2926-SM-5S2R8 70-79 years, male 957.4
GTEX-WHSE-2926-SM-3NMBG 20-29 years, male 956.1
GTEX-14DAQ-3026-SM-5S2QZ 60-69 years, female 951.3
GTEX-1F52S-3026-SM-7P8PV 60-69 years, female 950.6
GTEX-ZUA1-2926-SM-59HL3 40-49 years, male 943.7
GTEX-11ONC-3026-SM-5985W 60-69 years, male 942.7
GTEX-1JJE9-3026-SM-CNNPA 70-79 years, male 942.3
GTEX-145MH-2926-SM-5Q5D2 50-59 years, male 941.9
GTEX-11OC5-0626-SM-5HL6M 60-69 years, male 940.3
GTEX-RU72-2926-SM-2TF66 50-59 years, female 938.0
GTEX-14PJO-2926-SM-686ZI 60-69 years, male 935.5
GTEX-1GN73-3026-SM-7MXV8 60-69 years, male 931.3
GTEX-1I1HK-2726-SM-AHZ2M 60-69 years, male 924.1
GTEX-Y8DK-0726-SM-4TT3S 60-69 years, male 922.0
GTEX-12WSH-3126-SM-5LZW8 50-59 years, male 920.0
GTEX-13O3O-3026-SM-5KM42 60-69 years, female 915.4
GTEX-13CF2-3026-SM-5IFFX 60-69 years, male 914.9
GTEX-13NYB-3226-SM-5J2ND 40-49 years, male 914.6
GTEX-1GZ2Q-3026-SM-9JGG3 40-49 years, male 913.0
GTEX-145LU-2626-SM-5LU9Z 50-59 years, male 912.2
GTEX-13OVH-2926-SM-5IJFH 70-79 years, male 911.6
GTEX-1B996-2926-SM-7MXUH 60-69 years, male 910.5
GTEX-1EMGI-3126-SM-7MXUR 60-69 years, male 909.6
GTEX-1JMPZ-2826-SM-C1YRA 30-39 years, male 908.2
GTEX-139TT-2626-SM-5LZUB 60-69 years, male 904.1
GTEX-11DXW-1026-SM-5H11K 40-49 years, male 903.7
GTEX-145LS-3026-SM-5O99S 60-69 years, female 900.5
GTEX-1GZ4I-2926-SM-9JGGO 50-59 years, male 899.9
GTEX-12WSC-2926-SM-5BC5Z 50-59 years, male 895.8
GTEX-1B8SF-3026-SM-731DX 60-69 years, male 889.1
GTEX-145MF-2826-SM-7EPGU 50-59 years, male 887.4
GTEX-1H1DG-2826-SM-9JGHB 70-79 years, male 884.7
GTEX-1POEN-2726-SM-E9U6B 30-39 years, female 883.5
GTEX-Q2AG-2826-SM-2HMJQ 40-49 years, female 881.3
GTEX-147F4-3026-SM-5Q5BJ 50-59 years, male 881.1
GTEX-1CB4H-3026-SM-79OLX 60-69 years, female 877.8
GTEX-13X6K-2826-SM-5O9DS 60-69 years, female 875.0
GTEX-144GL-2926-SM-5O99F 50-59 years, male 874.8
GTEX-11NUK-3026-SM-5986K 50-59 years, male 869.2
GTEX-ZAJG-3026-SM-5HL92 50-59 years, female 866.2
GTEX-17EVP-2926-SM-793BU 40-49 years, male 865.1
GTEX-QDT8-3026-SM-32PKB 30-39 years, female 864.4
GTEX-14JFF-2826-SM-6871Q 60-69 years, male 861.3
GTEX-14JG1-2926-SM-686ZK 40-49 years, male 858.6
GTEX-1HCVE-2926-SM-9WPPJ 50-59 years, male 858.2
GTEX-1JMOU-2826-SM-EV79R 60-69 years, female 853.7
GTEX-13OW8-2926-SM-5L3FV 60-69 years, male 853.2
GTEX-139TS-3126-SM-5LZWX 60-69 years, male 849.8
GTEX-S7SE-2526-SM-2XCDL 50-59 years, male 846.5
GTEX-17HII-2926-SM-79OMK 50-59 years, male 841.2
GTEX-1EU9M-2926-SM-793DF 60-69 years, male 840.7
GTEX-14BMV-2926-SM-5TDEE 50-59 years, male 834.6
GTEX-1JMLX-3026-SM-EV79Q 50-59 years, male 833.8
GTEX-RNOR-2226-SM-2TF5O 50-59 years, female 833.3
GTEX-QMR6-1326-SM-32PLB 50-59 years, male 832.8
GTEX-12WSD-3026-SM-5LZU7 60-69 years, female 821.6
GTEX-P44H-2426-SM-2XCEJ 40-49 years, male 820.3
GTEX-WZTO-2826-SM-3NM8P 40-49 years, male 820.3
GTEX-14PJM-3026-SM-6LLHM 50-59 years, female 818.7
GTEX-14ASI-2926-SM-5Q5DG 60-69 years, male 816.1
GTEX-1KWVE-2226-SM-CXZKN 30-39 years, male 814.8
GTEX-1JJEA-2926-SM-C1YSK 60-69 years, male 812.5
GTEX-1C64N-3126-SM-79OO3 50-59 years, male 812.1
GTEX-1A8G6-3126-SM-731D8 60-69 years, male 800.0
GTEX-1I1GV-3026-SM-CNNR9 60-69 years, male 791.2
GTEX-117XS-3126-SM-5GIDP 60-69 years, male 784.8
GTEX-TSE9-2926-SM-3DB77 60-69 years, female 783.9
GTEX-14C5O-2926-SM-5RQI1 60-69 years, male 778.1
GTEX-PVOW-2626-SM-32PL8 40-49 years, male 772.2
GTEX-11PRG-2826-SM-5BC54 50-59 years, male 769.0
GTEX-1IL2V-3026-SM-CYPSA 70-79 years, male 767.0
GTEX-17EVQ-2726-SM-7EWDT 70-79 years, male 763.5
GTEX-1P4AB-3026-SM-EXOJS 50-59 years, male 762.4
GTEX-12126-0926-SM-5FQTW 20-29 years, male 760.3
GTEX-1EKGG-3126-SM-9WPO5 60-69 years, male 752.7
GTEX-1H3NZ-2926-SM-9WPQ8 60-69 years, male 750.7
GTEX-X4XX-2926-SM-3NMB1 60-69 years, male 744.4
GTEX-1IY9M-3126-SM-AHZ3A 60-69 years, male 735.0
GTEX-13X6J-2926-SM-7EPGP 50-59 years, male 728.7
GTEX-17HHY-2926-SM-79OJW 50-59 years, male 728.2
GTEX-13FXS-3026-SM-5LZYO 50-59 years, male 724.0
GTEX-12ZZX-2826-SM-5BC6K 40-49 years, female 716.7
GTEX-11NV4-2226-SM-5BC4T 60-69 years, male 672.7
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CEREBELLUM - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

184.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Cerebellum
Scaled Tags Per Million: 184.5
FF:10083-102B2 22-68 years, mixed 269.2
FF:10166-103B4 76 years, female 99.7

CEREBELLUM - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

198.5
Pig sample Sample description nTPM
Cerebellum
nTPM: 198.6
Samples: 4

Max nTPM: 293.3
Min nTPM: 152.4
Sample A Female 293.3
Sample B Female 178.3
Sample C Male 152.4
Sample D Male 170.2

CEREBELLUM - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

981.1
Mouse sample Sample description nTPM
Cerebellum
nTPM: 981.1
Samples: 4

Max nTPM: 1035.8
Min nTPM: 914.0
Sample A Male 914.0
Sample B Male 1031.1
Sample C Female 943.4
Sample D Female 1035.8

CEREBELLUM - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

3.7
Allen experiment id Experiment description Expression energy
Cerebellum
Expression energy: 3.7
100143572 Antisense, RP_110407_01_F09, Mouse strain C57BL/6J (56 days, male) 3.7

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