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S100B
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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
PRIMARY MOUSE DATA
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:887.6 nTPM
HPA Brain:826.7 nTPM
GTEx:887.6 nTPM
FANTOM5:877.8 Scaled Tags Per Million
Pig:1612.5 nTPM
Mouse:186.7 nTPM
Allen mouse:1.5 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA015768Antibody CAB000073Antibody CAB078196
Glial cells HighHighHigh
Neuronal cells Not detectedMediumNot detected







BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

826.7
Sample id Sample description nTPM
Caudate nucleus
nTPM: 259.3
2288 Male, age 75, left hemisphere 302.9
2481 Female, age 94, left hemisphere 300.5
1857 Female, age 85, left hemisphere 279.7
2846 Female, age 79, unknown 247.9
1781 Male, age 74, unknown 246.2
1854 Male, age 80, left hemisphere 240.7
2289 Male, age 61, right hemisphere 234.4
2290 Female, age 72, unknown 222.3
Globus pallidus, externus
nTPM: 738.8
1996 Male, age 80, right hemisphere 1070.7
2772 Female, age 79, unknown 833.5
2646 Male, age 61, right hemisphere 738.4
2395 Male, age 75, both hemispheres 537.0
2567 Female, age 72, unknown 514.4
Globus pallidus, internus
nTPM: 826.7
2111 Female, age 85, right hemisphere 1101.6
2037 Male, age 80, right hemisphere 1046.9
2778 Female, age 91, both hemispheres 938.9
1818 Male, age 74, unknown 827.5
2287 Male, age 75, right hemisphere 710.7
2566 Female, age 72, unknown 673.2
2483 Female, age 94, right hemisphere 487.9
Nucleus accumbens
nTPM: 328.1
2391 Female, age 94, left hemisphere 520.0
2698 Female, age 72, unknown 417.9
2732 Male, age 80, right hemisphere 384.2
1806 Female, age 85, left hemisphere 316.0
2286 Male, age 75, left hemisphere 304.6
2824 Male, age 61, right hemisphere 247.4
1856 Female, age 91, right hemisphere 218.2
1783 Male, age 74, unknown 216.3
Nucleus basalis of Meynert
nTPM: 415.2
2569 Male, age 61, both hemispheres 734.3
2821 Male, age 75, both hemispheres 354.4
2393 Male, age 80, right hemisphere 310.8
2484 Female, age 94, left hemisphere 261.4
Nucleus of the diagonal band
nTPM: 228.3
1812 Female, age 91, both hemispheres 422.3
1979 Male, age 74, unknown 210.9
2195 Female, age 85, both hemispheres 181.1
2775 Male, age 80, right hemisphere 177.2
2029 Male, age 61, right hemisphere 150.0
Putamen
nTPM: 257.4
2482 Female, age 94, left hemisphere 368.8
2489 Female, age 72, unknown 292.5
1829 Male, age 74, unknown 281.8
2647 Male, age 75, left hemisphere 277.8
1937 Female, age 91, right hemisphere 251.8
2466 Female, age 79, unknown 194.0
1838 Male, age 80, right hemisphere 135.3
Septal nuclei
nTPM: 285.6
2199 Male, age 80, right hemisphere 421.9
2394 Male, age 61, left hemisphere 387.9
2059 Female, age 85, both hemispheres 328.3
2629 Female, age 94, right hemisphere 309.7
2009 Female, age 91, both hemispheres 230.5
2031 Female, age 72, unknown 165.7
1960 Male, age 74, unknown 155.0
Stria terminalis, bed nucleus
nTPM: 197.9
2201 Male, age 74, unknown 246.3
1974 Female, age 91, both hemispheres 196.7
2486 Female, age 94, both hemispheres 150.7

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

887.6
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 705.9
Samples: 246

Max nTPM: 1980.4
Min nTPM: 183.8
Std nTPM: 316.3
Median nTPM: 645.6
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 1980.4
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 1666.6
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 1661.4
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 1613.6
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 1598.7
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 1591.2
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 1429.7
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 1424.5
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 1424.2
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 1422.0
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 1373.9
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 1372.4
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 1323.6
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 1308.5
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 1265.8
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 1254.0
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 1220.4
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 1218.5
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 1214.4
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 1211.6
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 1210.1
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 1196.8
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 1191.0
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 1189.5
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 1186.8
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 1183.3
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 1164.0
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 1139.8
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 1110.8
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 1088.3
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 1079.6
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 1059.1
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 1055.1
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 1050.3
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 1043.1
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 1040.0
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 1034.3
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 1032.8
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 997.0
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 993.3
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 989.4
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 987.1
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 983.5
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 977.0
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 959.0
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 952.9
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 949.3
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 948.1
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 943.5
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 943.1
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 925.6
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 922.2
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 911.8
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 895.3
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 892.9
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 877.3
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 875.2
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 868.5
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 867.3
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 865.1
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 862.0
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 853.0
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 852.3
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 846.4
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 844.8
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 843.4
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 843.0
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 839.6
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 838.1
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 837.4
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 832.2
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 831.2
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 831.1
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 830.5
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 823.9
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 816.3
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 813.3
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 808.0
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 807.6
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 807.3
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 807.2
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 798.3
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 797.3
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 779.2
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 763.8
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 754.5
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 753.5
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 752.7
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 749.2
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 749.1
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 744.5
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 739.2
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 737.4
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 736.9
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 735.7
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 730.2
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 725.7
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 725.2
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 714.6
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 709.6
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 704.7
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 701.7
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 701.2
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 700.4
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 696.9
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 695.6
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 692.3
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 691.2
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 691.1
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 689.8
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 687.0
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 683.8
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 680.8
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 677.0
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 669.1
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 667.1
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 662.8
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 661.0
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 658.2
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 655.7
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 651.4
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 647.3
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 646.0
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 645.1
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 637.7
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 635.6
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 634.5
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 627.6
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 625.0
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 624.8
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 621.7
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 620.3
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 619.6
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 619.3
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 618.3
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 618.2
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 616.0
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 615.9
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 614.4
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 605.1
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 604.3
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 602.6
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 601.0
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 600.2
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 598.5
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 596.4
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 594.4
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 592.8
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 589.8
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 585.6
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 585.4
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 582.7
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 581.4
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 578.0
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 576.0
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 572.4
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 564.6
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 561.3
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 560.1
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 557.4
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 551.5
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 547.0
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 539.1
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 535.3
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 528.4
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 523.4
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 523.1
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 517.1
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 514.4
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 510.9
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 510.4
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 510.4
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 510.0
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 506.3
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 504.5
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 503.0
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 494.4
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 486.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 482.5
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 481.2
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 478.5
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 463.9
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 456.0
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 449.7
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 446.7
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 445.6
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 445.1
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 443.4
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 441.8
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 440.2
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 439.5
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 438.8
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 427.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 427.7
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 426.9
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 424.6
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 423.7
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 423.0
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 420.4
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 419.1
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 415.3
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 413.9
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 413.2
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 412.3
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 411.4
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 408.8
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 405.9
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 404.8
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 397.3
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 396.5
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 394.7
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 392.0
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 389.5
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 388.0
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 387.0
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 386.7
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 384.1
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 383.2
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 381.5
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 366.6
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 364.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 363.8
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 363.0
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 362.3
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 352.1
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 342.2
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 339.8
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 337.8
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 337.1
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 333.2
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 329.0
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 327.6
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 325.6
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 325.5
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 312.9
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 303.3
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 302.0
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 301.0
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 297.0
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 273.3
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 271.9
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 254.5
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 236.5
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 225.0
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 187.9
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 183.8
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 854.4
Samples: 246

Max nTPM: 4068.3
Min nTPM: 52.0
Std nTPM: 524.7
Median nTPM: 698.2
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 4068.3
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 3285.5
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 2906.8
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 2486.9
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 2381.8
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 2244.6
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 2050.1
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 1906.5
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 1895.3
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 1864.9
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 1837.8
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 1814.2
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 1771.1
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 1739.1
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 1714.4
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 1662.8
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 1661.5
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 1650.8
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 1605.5
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 1594.7
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 1568.4
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 1538.0
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 1537.2
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 1513.2
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 1501.4
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 1499.3
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 1497.0
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 1476.4
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 1467.2
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 1452.7
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 1445.0
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 1432.2
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 1398.0
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 1397.6
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 1378.7
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 1360.3
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 1331.8
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 1316.8
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 1312.0
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 1311.4
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 1289.3
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 1280.6
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 1274.9
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 1265.5
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 1264.9
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 1259.6
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 1247.3
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 1239.9
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 1217.0
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 1207.9
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 1207.8
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 1206.3
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 1171.2
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 1142.9
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 1124.7
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 1119.5
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 1113.5
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 1107.3
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 1095.9
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 1093.1
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 1092.4
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 1091.9
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 1075.1
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 1073.1
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 1066.1
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 1059.8
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 1047.7
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 1034.3
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 1027.2
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 1022.3
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 1020.1
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 1013.5
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 1006.2
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 1006.2
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 991.0
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 969.1
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 957.0
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 944.2
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 924.7
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 920.4
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 917.4
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 907.7
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 903.8
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 900.7
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 895.4
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 891.7
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 885.0
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 876.3
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 874.6
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 854.8
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 853.6
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 852.7
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 847.0
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 843.8
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 832.7
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 830.6
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 820.0
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 818.2
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 816.5
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 807.0
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 801.9
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 796.8
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 790.0
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 769.8
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 763.8
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 762.3
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 759.5
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 756.1
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 753.6
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 752.1
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 752.0
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 743.7
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 740.5
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 738.1
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 724.0
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 723.7
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 716.2
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 705.4
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 704.7
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 703.7
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 703.1
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 700.1
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 698.7
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 697.8
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 697.2
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 693.1
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 690.7
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 687.0
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 685.8
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 679.2
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 676.4
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 673.5
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 671.5
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 670.5
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 669.4
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 668.9
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 661.8
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 659.8
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 658.6
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 654.0
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 640.9
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 640.2
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 637.8
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 635.1
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 635.0
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 631.9
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 616.0
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 612.9
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 605.5
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 597.2
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 594.4
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 594.3
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 591.2
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 590.5
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 590.2
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 590.2
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 589.3
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 588.7
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 581.8
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 578.4
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 577.7
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 575.8
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 572.3
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 572.0
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 568.8
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 560.2
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 559.1
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 558.9
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 558.7
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 554.2
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 554.2
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 553.4
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 552.9
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 550.3
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 536.4
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 532.9
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 531.5
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 526.3
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 521.5
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 519.6
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 519.3
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 516.2
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 514.7
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 513.1
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 505.3
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 501.7
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 499.1
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 497.3
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 495.4
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 487.6
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 482.5
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 473.1
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 471.8
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 465.4
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 465.4
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 465.3
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 464.0
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 460.1
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 459.9
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 458.8
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 458.2
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 458.0
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 457.7
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 456.5
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 451.6
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 447.4
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 446.6
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 446.3
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 442.1
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 435.9
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 432.4
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 429.2
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 425.1
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 413.3
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 410.3
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 407.0
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 399.1
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 397.0
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 388.0
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 387.9
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 387.9
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 374.9
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 374.9
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 372.9
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 372.4
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 369.0
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 365.9
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 364.5
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 361.8
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 350.4
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 338.8
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 334.5
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 333.6
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 324.5
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 295.2
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 287.6
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 284.9
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 284.0
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 279.1
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 268.1
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 268.0
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 251.3
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 179.7
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 164.4
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 135.4
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 52.0
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Brain - Putamen (basal ganglia)
Average nTPM: 887.6
Samples: 205

Max nTPM: 2604.4
Min nTPM: 172.4
Std nTPM: 442.8
Median nTPM: 765.6
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 2604.4
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 2471.1
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 2318.6
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 2301.2
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 2248.7
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 2124.7
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 2110.9
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 2054.3
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 2053.5
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 1977.2
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 1825.7
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 1716.9
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 1518.1
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 1517.2
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 1486.7
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 1484.4
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 1484.2
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 1472.7
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 1471.1
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 1465.6
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 1465.4
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 1432.0
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 1422.2
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 1393.1
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 1377.6
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 1374.3
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 1322.1
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 1316.2
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 1299.0
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 1299.0
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 1271.2
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 1257.4
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 1233.7
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 1227.0
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 1212.0
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 1209.4
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 1203.0
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 1193.9
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 1178.6
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 1175.7
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 1170.0
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 1169.4
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 1164.1
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 1160.2
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 1156.1
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 1151.1
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 1150.2
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 1146.5
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 1144.3
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 1144.3
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 1126.7
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 1112.3
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 1075.0
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 1070.2
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 1067.3
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 1056.4
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 1053.8
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 1052.1
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 1047.7
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 1020.1
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 1019.4
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 1014.3
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 1003.2
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 1002.0
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 1001.1
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 994.4
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 993.6
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 983.0
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 982.2
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 981.1
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 980.5
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 974.7
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 961.4
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 956.5
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 955.4
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 946.9
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 934.7
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 934.7
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 927.4
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 922.2
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 911.8
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 903.2
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 886.3
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 882.5
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 879.1
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 877.8
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 870.1
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 864.9
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 863.3
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 857.9
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 848.8
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 846.6
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 845.9
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 841.8
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 833.9
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 833.6
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 807.1
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 806.2
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 806.2
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 803.2
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 780.8
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 770.1
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 765.6
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 761.4
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 757.8
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 757.3
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 748.0
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 744.7
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 743.5
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 732.2
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 729.0
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 721.6
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 718.2
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 716.9
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 710.9
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 707.8
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 707.1
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 705.8
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 704.0
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 703.7
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 702.8
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 692.4
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 692.4
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 688.3
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 683.1
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 681.9
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 670.1
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 668.7
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 664.4
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 663.3
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 658.0
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 655.5
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 655.3
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 655.3
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 646.3
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 644.7
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 644.7
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 638.0
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 635.3
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 633.0
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 630.7
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 619.6
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 615.8
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 614.9
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 608.5
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 607.3
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 607.1
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 606.6
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 605.3
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 605.0
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 604.2
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 595.3
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 592.4
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 589.7
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 584.7
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 579.2
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 573.7
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 571.4
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 567.6
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 564.5
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 563.4
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 561.4
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 560.1
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 559.9
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 548.8
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 543.3
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 537.5
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 536.1
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 530.6
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 522.5
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 521.3
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 513.1
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 511.4
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 510.5
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 509.9
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 501.3
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 501.1
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 497.7
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 493.5
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 493.0
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 490.1
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 467.3
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 463.2
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 457.3
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 451.4
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 442.2
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 432.7
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 426.4
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 411.8
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 411.1
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 401.8
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 394.1
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 386.3
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 378.7
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 363.5
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 351.1
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 350.9
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 349.0
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 328.8
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 291.8
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 287.0
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 271.9
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 243.3
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 173.8
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 172.4
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

877.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 270.8
FF:10164-103B2 76 years, female 270.8
Nucleus accumbens
Scaled Tags Per Million: 483.5
FF:10037-101F1 23-56 years, mixed 483.5
Putamen
Scaled Tags Per Million: 380.7
FF:10176-103C5 60 years, female 380.7
Globus pallidus
Scaled Tags Per Million: 877.8
FF:10175-103C4 60 years, female 978.6
FF:10161-103A8 76 years, female 777.1

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1612.5
Pig sample Sample description nTPM
Caudate
nTPM: 1339.7
Samples: 4

Max nTPM: 1487.3
Min nTPM: 1134.1
Sample A Female 1321.1
Sample B Female 1416.3
Sample C Male 1487.3
Sample D Male 1134.1
Putamen
nTPM: 1612.5
Samples: 4

Max nTPM: 1930.4
Min nTPM: 1156.6
Sample A Female 1930.4
Sample B Female 1156.6
Sample C Male 1927.1
Sample D Male 1435.9
Septum
nTPM: 1412.9
Samples: 4

Max nTPM: 1569.7
Min nTPM: 1316.0
Sample A Female 1569.7
Sample B Female 1316.0
Sample C Male 1399.6
Sample D Male 1366.1
Ventral pallidum
nTPM: 1308.1
Samples: 4

Max nTPM: 1440.9
Min nTPM: 1191.4
Sample A Female 1254.5
Sample B Female 1440.9
Sample C Male 1345.4
Sample D Male 1191.4

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

186.7
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 186.8
Samples: 4

Max nTPM: 196.7
Min nTPM: 180.3
Sample A Male 180.3
Sample B Male 189.6
Sample C Female 196.7
Sample D Female 180.4
Septum
nTPM: 159.6
Samples: 4

Max nTPM: 192.9
Min nTPM: 142.1
Sample A Male 142.1
Sample B Male 158.3
Sample C Female 144.9
Sample D Female 192.9
Ventral forebrain
nTPM: 172.9
Samples: 4

Max nTPM: 175.5
Min nTPM: 169.7
Sample A Male 175.5
Sample B Male 173.8
Sample C Female 169.7
Sample D Female 172.6

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

1.5
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 1.4
79591593 Antisense, RP_071204_04_D04, Mouse strain C57BL/6J (56 days, male) 1.4
79762548 Antisense, RP_071204_04_D04, Mouse strain C57BL/6J (56 days, male) 0.5
Pallidum
Expression energy: 1.5
79591593 Antisense, RP_071204_04_D04, Mouse strain C57BL/6J (56 days, male) 1.5
79762548 Antisense, RP_071204_04_D04, Mouse strain C57BL/6J (56 days, male) 0.5

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