PONS AND MEDULLA - Expression summary
Mouse brain, Intensity
Medulla oblongatai 		70.504
Mouse brain, Intensity
Ponsi 		42.574
RNA expressioni
HPA Brain:1734.9 nTPM
FANTOM5:1559.4 Scaled Tags Per Million
Pig:2799.6 nTPM
Mouse:876.7 nTPM
Allen mouse:8.2 Expression energy

MEDULLA OBLONGATA - Mouse brain profilei , antibody CAB000073
Medulla oblongata mean intensity 70.504
intensityi
FRONT BACK
Nucleus of the solitary tract 4.981
Raphe magnus nucleus 6.071
Cochlear nucleus 4.928
Lateral paragigantocellular nucleus 47.702
Raphe pallidus nucleus 57.292
Facial nucleus 31.229
Hypoglossal nucleus 41.313
Ambiguus nucleus 26.573
External cuneate nucleus 10.401
Inferior olivary nucleus 2.374
Raphe obscures nucleus 4.762
Dorsal motor nucleus of vagus 70.504
Barrington's nucleus -
Koelliker-fuse nucleus -
Motor tregiminal nucleus 21.787
Parabrachial nucleus 34.599
Principle sensory trigeminal nucleus 6.632
Locus coeruleus 42.574
Pontine nucleus -
Vestibular nucleus 6.754
Pontine reticular nucleus, oral 2.068
Lateral lemniscus -
Superior paraolivary nucleus 30.791

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 1734.9
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 1070.3
2301 Female, age 85, both hemispheres 1541.5
2090 Male, age 80, both hemispheres 1075.2
2188 Female, age 91, both hemispheres 937.3
1984 Male, age 76, both hemispheres 727.1
Area postrema
nTPM: 930.6
2799 Male, age 61, both hemispheres 1125.8
2306 Male, age 80, both hemispheres 1055.3
2054 Male, age 76, both hemispheres 610.7
Dorsal cochlear nucleus
nTPM: 745.8
2187 Female, age 91, both hemispheres 903.7
2378 Male, age 80, both hemispheres 813.8
2802 Male, age 74, right hemisphere 705.1
2370 Male, age 61, both hemispheres 682.1
2058 Male, age 76, both hemispheres 624.3
Dorsal medullary reticular nucleus
nTPM: 743.0
2373 Male, age 61, both hemispheres 832.1
2040 Female, age 85, both hemispheres 714.2
2088 Male, age 76, both hemispheres 682.7
Dorsal motor vagal complex
nTPM: 644.2
2797 Male, age 61, both hemispheres 958.1
2185 Male, age 76, both hemispheres 756.7
2643 Male, age 74, both hemispheres 627.4
2807 Female, age 85, both hemispheres 623.5
2813 Female, age 72, unknown 620.5
2000 Male, age 74, unknown 575.6
2844 Male, age 55, unknown 503.9
2133 Female, age 91, both hemispheres 487.9
Dorsal tegmental nucleus
nTPM: 723.3
2083 Male, age 80, both hemispheres 858.9
2326 Male, age 74, both hemispheres 774.5
1936 Male, age 76, left hemisphere 683.7
2358 Male, age 61, both hemispheres 576.1
Dorsolateral tegmental area
nTPM: 814.8
2751 Female, age 85, both hemispheres 1218.9
2337 Male, age 61, both hemispheres 971.8
2654 Male, age 80, both hemispheres 899.9
2360 Male, age 74, both hemispheres 533.5
2141 Male, age 76, both hemispheres 450.1
Gigantocellular reticular nuclei, medullary
nTPM: 810.6
2314 Male, age 61, both hemispheres 1653.1
1876 Female, age 85, both hemispheres 866.2
2387 Female, age 91, both hemispheres 754.5
2310 Male, age 80, both hemispheres 632.2
2022 Male, age 76, right hemisphere 501.4
2462 Male, age 74, both hemispheres 456.1
Gigantocellular reticular nuclei, pars
nTPM: 648.7
2336 Male, age 61, both hemispheres 805.0
2084 Female, age 85, both hemispheres 689.1
2706 Male, age 80, both hemispheres 637.2
2330 Male, age 80, both hemispheres 618.1
2168 Male, age 76, both hemispheres 494.4
Inferior olive
nTPM: 1042.4
2178 Male, age 61, both hemispheres 1267.1
2085 Female, age 85, both hemispheres 1107.3
2379 Male, age 80, both hemispheres 1003.5
2563 Male, age 74, both hemispheres 950.9
2628 Female, age 91, both hemispheres 883.4
Kolliker-Fuse nucleus
nTPM: 1085.8
2315 Male, age 76, right hemisphere 1630.7
2793 Female, age 91, left hemisphere 837.5
2163 Male, age 80, both hemispheres 789.1
Lateral lemniscal nuclei
nTPM: 551.2
2320 Female, age 91, left hemisphere 603.2
2746 Female, age 85, left hemisphere 602.7
2169 Male, age 76, both hemispheres 593.6
2453 Male, age 74, right hemisphere 481.8
2036 Male, age 80, both hemispheres 474.8
Lateral medullary reticular nucleus
nTPM: 1182.5
2852 Male, age 80, both hemispheres 1530.6
2305 Male, age 74, both hemispheres 1351.1
2374 Male, age 61, both hemispheres 1327.8
2190 Female, age 85, both hemispheres 1197.0
2804 Female, age 91, both hemispheres 948.8
2044 Male, age 76, both hemispheres 739.7
Lateral parabrachial nucleus
nTPM: 954.6
2792 Male, age 76, both hemispheres 1675.1
2013 Male, age 80, both hemispheres 871.7
2139 Female, age 85, right hemisphere 689.3
2790 Male, age 61, both hemispheres 582.2
Lateral vestibular nucleus
nTPM: 997.2
2311 Male, age 80, both hemispheres 1279.9
2184 Male, age 76, both hemispheres 714.5
Locus coeruleus
nTPM: 445.5
2720 Male, age 74, both hemispheres 585.7
2788 Male, age 74, unknown 479.8
2162 Male, age 80, both hemispheres 469.4
2123 Female, age 91, both hemispheres 449.4
2317 Female, age 72, unknown 412.5
2014 Male, age 55, unknown 385.9
1980 Male, age 76, both hemispheres 336.1
Medial olivary nucleus
nTPM: 1446.5
1962 Male, age 76, both hemispheres 1918.7
1943 Male, age 61, both hemispheres 1678.5
2851 Male, age 80, both hemispheres 1151.7
2138 Female, age 91, both hemispheres 1036.8
Medial parabrachial nucleus
nTPM: 920.8
2170 Female, age 91, both hemispheres 1252.4
2854 Male, age 80, both hemispheres 1044.7
2463 Female, age 85, right hemisphere 949.0
2156 Male, age 61, both hemispheres 697.8
2786 Male, age 76, both hemispheres 660.0
Medial periolivary nuclei
nTPM: 652.7
2791 Male, age 74, right hemisphere 785.5
2081 Male, age 80, both hemispheres 739.6
2458 Female, age 91, both hemispheres 650.6
2063 Male, age 76, both hemispheres 648.8
2171 Female, age 85, both hemispheres 438.8
Medial vestibular nucleus
nTPM: 899.1
2801 Male, age 74, both hemispheres 1371.9
2624 Male, age 61, both hemispheres 1113.7
2803 Female, age 91, both hemispheres 817.7
2093 Male, age 80, both hemispheres 802.6
2743 Female, age 85, both hemispheres 772.8
2134 Male, age 76, both hemispheres 515.7
Motor facial nucleus
nTPM: 671.9
2126 Male, age 61, both hemispheres 898.5
2697 Female, age 85, both hemispheres 793.0
2365 Male, age 74, right hemisphere 729.9
2795 Female, age 91, both hemispheres 621.5
2062 Male, age 76, both hemispheres 556.2
2327 Male, age 80, both hemispheres 432.5
Motor hypoglossal nucleus
nTPM: 783.5
2182 Male, age 80, both hemispheres 1218.4
2125 Female, age 91, both hemispheres 826.4
2132 Female, age 85, both hemispheres 779.5
2461 Male, age 61, both hemispheres 674.0
2277 Male, age 76, both hemispheres 419.4
Motor trigeminal nucleus
nTPM: 630.8
2335 Male, age 61, both hemispheres 676.8
2321 Female, age 91, both hemispheres 664.9
2560 Male, age 74, both hemispheres 650.9
2309 Male, age 76, both hemispheres 625.3
2079 Male, age 80, both hemispheres 536.4
Nuclei of the trapezoid body
nTPM: 594.9
2166 Male, age 80, both hemispheres 778.5
1983 Male, age 76, both hemispheres 640.5
2159 Male, age 61, both hemispheres 629.9
2368 Female, age 91, both hemispheres 549.0
2735 Female, age 85, both hemispheres 376.6
Nucleus ambiguus
nTPM: 955.6
2071 Male, age 76, both hemispheres 1537.1
2096 Female, age 85, both hemispheres 374.2
Nucleus cuneatus
nTPM: 946.5
2380 Male, age 80, both hemispheres 1494.2
2808 Female, age 85, both hemispheres 1328.0
2381 Male, age 80, both hemispheres 1148.9
2376 Male, age 61, both hemispheres 1004.3
2564 Male, age 74, both hemispheres 908.5
2100 Male, age 76, both hemispheres 776.8
2805 Female, age 91, both hemispheres 677.8
2562 Male, age 61, both hemispheres 620.3
2131 Male, age 76, both hemispheres 559.4
Nucleus gracilis
nTPM: 1034.6
2382 Male, age 80, both hemispheres 1267.6
2627 Male, age 74, both hemispheres 1172.0
2299 Female, age 85, both hemispheres 664.2
Nucleus raphe magnus
nTPM: 515.9
2051 Male, age 76, both hemispheres 713.7
2455 Male, age 74, both hemispheres 607.0
2328 Male, age 80, both hemispheres 567.4
2459 Female, age 91, both hemispheres 507.8
2160 Male, age 61, both hemispheres 441.3
2172 Female, age 85, both hemispheres 258.5
Nucleus raphe obscurus
nTPM: 1734.9
2142 Male, age 76, midline 2095.8
2845 Female, age 85, midline 1722.0
2800 Male, age 61, midline 1386.9
Nucleus raphe pallidus
nTPM: 1422.1
2145 Male, age 76, midline 1832.9
1924 Male, age 61, midline 1429.6
2183 Male, age 80, midline 1003.6
Nucleus tractus solitarii
nTPM: 459.1
2144 Female, age 91, right hemisphere 552.2
2191 Female, age 85, both hemispheres 542.0
2656 Male, age 76, both hemispheres 418.6
2307 Male, age 80, both hemispheres 323.6
Paramedian reticular nucleus
nTPM: 837.9
2052 Male, age 76, both hemispheres 1268.9
2057 Male, age 80, both hemispheres 792.5
2050 Female, age 85, both hemispheres 685.4
2313 Male, age 61, both hemispheres 604.7
Parvicellular reticular nuclei
nTPM: 821.2
2095 Male, age 76, both hemispheres 1041.6
2119 Male, age 80, both hemispheres 986.0
2558 Male, age 74, both hemispheres 436.0
Parvicellular reticular nuclei, medullary
nTPM: 589.0
2189 Female, age 91, both hemispheres 644.2
2091 Female, age 85, both hemispheres 592.3
2181 Male, age 80, left hemisphere 530.6
Pedunculopontine tegmental nucleus
nTPM: 689.9
2338 Male, age 61, both hemispheres 832.6
2334 Male, age 80, both hemispheres 720.7
1921 Female, age 85, both hemispheres 516.3
Peritrigeminal nucleus
nTPM: 1107.3
2067 Female, age 85, both hemispheres 1173.2
2136 Male, age 76, both hemispheres 1166.0
2179 Male, age 61, both hemispheres 982.6
Pontine nuclei
nTPM: 637.4
2454 Male, age 74, left hemisphere 825.1
2109 Female, age 72, unknown 794.4
2319 Female, age 91, both hemispheres 790.5
2115 Male, age 80, left hemisphere 639.7
1968 Male, age 76, left hemisphere 624.1
1863 Male, age 55, unknown 612.1
2727 Male, age 61, right hemisphere 465.4
2787 Female, age 85, both hemispheres 347.5
Pontine raphe nucleus
nTPM: 485.6
2853 Male, age 76, midline 505.9
2122 Female, age 85, midline 465.2
Posteroventral cochlear nucleus
nTPM: 910.5
2341 Male, age 80, both hemispheres 1549.8
2135 Female, age 91, both hemispheres 952.9
2371 Male, age 61, both hemispheres 840.4
2070 Male, age 76, both hemispheres 698.3
2752 Female, age 85, both hemispheres 511.0
Prepositus hypoglossal nucleus
nTPM: 1026.0
2855 Female, age 85, right hemisphere 1479.2
2086 Male, age 80, both hemispheres 572.7
Principal sensory trigeminal nucleus
nTPM: 639.8
2367 Female, age 91, left hemisphere 766.7
2324 Male, age 76, both hemispheres 740.1
2158 Male, age 61, both hemispheres 560.3
2008 Male, age 80, left hemisphere 492.2
Reticular pontine nucleus, caudal
nTPM: 672.4
2092 Male, age 76, both hemispheres 844.5
2559 Male, age 74, both hemispheres 803.6
2457 Female, age 91, both hemispheres 663.5
2332 Male, age 80, right hemisphere 378.2
Reticular pontine nucleus, oral
nTPM: 776.7
2361 Male, age 74, both hemispheres 884.9
1939 Male, age 80, both hemispheres 832.5
2366 Female, age 91, both hemispheres 728.6
2012 Female, age 85, both hemispheres 725.1
2167 Male, age 76, both hemispheres 712.1
Reticulotegmental nucleus
nTPM: 622.0
2322 Female, age 91, both hemispheres 734.3
2333 Male, age 80, both hemispheres 643.4
2452 Male, age 74, both hemispheres 584.6
2325 Male, age 76, both hemispheres 525.8
Spinal trigeminal nucleus, caudal
nTPM: 809.2
2312 Male, age 61, both hemispheres 1080.1
2308 Male, age 80, both hemispheres 964.2
2447 Male, age 76, both hemispheres 708.9
2642 Male, age 74, both hemispheres 679.7
2390 Female, age 91, both hemispheres 612.9
Spinal trigeminal nucleus, interpolar
nTPM: 619.5
2625 Male, age 61, both hemispheres 731.9
2033 Male, age 80, both hemispheres 679.8
2386 Female, age 85, both hemispheres 578.0
2066 Male, age 76, right hemisphere 560.1
2389 Female, age 91, both hemispheres 547.8
Spinal trigeminal nucleus, oral
nTPM: 597.3
2164 Male, age 80, both hemispheres 720.2
2737 Female, age 85, both hemispheres 553.6
1978 Male, age 76, both hemispheres 517.9
Spinal vestibular nucleus
nTPM: 765.2
2806 Female, age 85, both hemispheres 1032.4
2384 Male, age 74, both hemispheres 809.9
2748 Male, age 76, both hemispheres 799.2
2780 Male, age 80, both hemispheres 691.3
2796 Male, age 61, both hemispheres 646.5
2186 Female, age 91, both hemispheres 612.0
Subcoeruleus area
nTPM: 720.0
2369 Female, age 85, left hemisphere 1313.3
1958 Male, age 80, both hemispheres 776.4
2089 Male, age 76, left hemisphere 575.7
2451 Male, age 74, both hemispheres 523.8
2323 Female, age 91, left hemisphere 411.0
Superior olive
nTPM: 705.7
2020 Male, age 76, both hemispheres 917.6
2364 Male, age 74, right hemisphere 831.0
2329 Male, age 80, right hemisphere 687.6
2561 Female, age 91, both hemispheres 559.7
1875 Female, age 85, both hemispheres 532.4
Superior vestibular nucleus
nTPM: 928.9
2015 Male, age 80, both hemispheres 1011.6
2383 Male, age 74, both hemispheres 908.2
2061 Male, age 76, both hemispheres 867.0
Ventral medullary reticular nucleus
nTPM: 917.9
2372 Male, age 61, both hemispheres 1115.3
2060 Male, age 76, both hemispheres 720.5
Ventral periolivary nuclei
nTPM: 654.6
2023 Male, age 76, both hemispheres 1025.2
2165 Male, age 80, both hemispheres 594.8
2130 Female, age 85, both hemispheres 538.9
2794 Female, age 91, left hemisphere 459.4
Ventrolateral medulla, A1-C1 cell groups
nTPM: 932.7
2118 Male, age 80, both hemispheres 1113.6
2180 Male, age 61, both hemispheres 1045.4
1986 Male, age 76, both hemispheres 1002.7
2741 Female, age 85, both hemispheres 784.5
2302 Female, age 91, both hemispheres 717.2
Ventrolateral tegmental area, A5 NE cell group
nTPM: 687.1
1959 Male, age 76, both hemispheres 826.2
2359 Male, age 61, both hemispheres 800.4
2840 Female, age 85, both hemispheres 703.8
2161 Male, age 80, both hemispheres 632.5
2456 Female, age 91, both hemispheres 621.5
2449 Male, age 74, both hemispheres 538.4

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 1559.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 1559.4
FF:10182-103D2 60 years, female 2033.7
FF:10165-103B3 76 years, female 1085.2
Medulla oblongata
Scaled Tags Per Million: 1541.5
FF:10038-101F2 18-64 years, mixed 2036.2
FF:10174-103C3 60 years, female 1571.9
FF:10155-103A2 76 years, female 1016.3
Pons
Scaled Tags Per Million: 1217.2
FF:10033-101E6 18-54 years, mixed 1217.2

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 2799.6
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 2799.6
Samples: 4

Max nTPM: 3559.7
Min nTPM: 2154.3
Sample A Female 2284.6
Sample B Female 2154.3
Sample C Male 3199.9
Sample D Male 3559.7
Pons
nTPM: 2147.5
Samples: 4

Max nTPM: 2848.5
Min nTPM: 1522.2
Sample A Female 1665.7
Sample B Female 1522.2
Sample C Male 2553.5
Sample D Male 2848.5

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 876.7
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 876.7
Samples: 4

Max nTPM: 959.6
Min nTPM: 822.0
Sample A Male 873.1
Sample B Male 822.0
Sample C Female 852.0
Sample D Female 959.6

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 8.2
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 8.2
79591593 Antisense, RP_071204_04_D04, Mouse strain C57BL/6J (56 days, male) 8.2
79762548 Antisense, RP_071204_04_D04, Mouse strain C57BL/6J (56 days, male) 4.7
Pons
Expression energy: 6.6
79591593 Antisense, RP_071204_04_D04, Mouse strain C57BL/6J (56 days, male) 6.6
79762548 Antisense, RP_071204_04_D04, Mouse strain C57BL/6J (56 days, male) 3.1

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