We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
CPLX1
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • CPLX1
BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:209.5 nTPM
HPA Brain:291.2 nTPM
GTEx:209.5 nTPM
FANTOM5:299.3 Scaled Tags Per Million
Pig:159.1 nTPM
Mouse:639.8 nTPM
Allen mouse:21.9 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA071191Antibody HPA074390
Glial cells LowLow
Neuronal cells MediumMedium





BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

291.2
Sample id Sample description nTPM
Caudate nucleus
nTPM: 249.1
2290 Female, age 72, unknown 302.3
2288 Male, age 75, left hemisphere 302.2
1781 Male, age 74, unknown 266.8
2846 Female, age 79, unknown 256.1
2289 Male, age 61, right hemisphere 236.6
1857 Female, age 85, left hemisphere 231.9
1854 Male, age 80, left hemisphere 230.1
2481 Female, age 94, left hemisphere 166.9
Globus pallidus, externus
nTPM: 171.8
2772 Female, age 79, unknown 257.1
2567 Female, age 72, unknown 245.4
2646 Male, age 61, right hemisphere 153.0
1996 Male, age 80, right hemisphere 139.8
2395 Male, age 75, both hemispheres 63.7
Globus pallidus, internus
nTPM: 124.4
1818 Male, age 74, unknown 243.4
2037 Male, age 80, right hemisphere 171.2
2566 Female, age 72, unknown 155.8
2483 Female, age 94, right hemisphere 130.6
2111 Female, age 85, right hemisphere 88.2
2778 Female, age 91, both hemispheres 42.5
2287 Male, age 75, right hemisphere 38.9
Nucleus accumbens
nTPM: 181.5
1783 Male, age 74, unknown 250.4
2286 Male, age 75, left hemisphere 250.1
1856 Female, age 91, right hemisphere 231.4
1806 Female, age 85, left hemisphere 194.7
2698 Female, age 72, unknown 178.8
2824 Male, age 61, right hemisphere 173.9
2391 Female, age 94, left hemisphere 114.9
2732 Male, age 80, right hemisphere 57.5
Nucleus basalis of Meynert
nTPM: 216.9
2484 Female, age 94, left hemisphere 253.7
2393 Male, age 80, right hemisphere 243.5
2821 Male, age 75, both hemispheres 238.9
2569 Male, age 61, both hemispheres 131.7
Nucleus of the diagonal band
nTPM: 134.4
2029 Male, age 61, right hemisphere 170.9
2775 Male, age 80, right hemisphere 158.7
2195 Female, age 85, both hemispheres 133.9
1812 Female, age 91, both hemispheres 132.1
1979 Male, age 74, unknown 76.3
Putamen
nTPM: 291.2
2647 Male, age 75, left hemisphere 421.0
1829 Male, age 74, unknown 363.8
1838 Male, age 80, right hemisphere 305.7
2489 Female, age 72, unknown 294.2
1937 Female, age 91, right hemisphere 244.9
2466 Female, age 79, unknown 210.3
2482 Female, age 94, left hemisphere 198.3
Septal nuclei
nTPM: 124.6
1960 Male, age 74, unknown 183.3
2394 Male, age 61, left hemisphere 146.3
2629 Female, age 94, right hemisphere 139.3
2031 Female, age 72, unknown 123.5
2059 Female, age 85, both hemispheres 108.4
2009 Female, age 91, both hemispheres 100.0
2199 Male, age 80, right hemisphere 71.3
Stria terminalis, bed nucleus
nTPM: 134.7
1974 Female, age 91, both hemispheres 176.1
2486 Female, age 94, both hemispheres 155.8
2201 Male, age 74, unknown 72.3

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

209.5
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 187.2
Samples: 246

Max nTPM: 487.1
Min nTPM: 27.2
Std nTPM: 84.3
Median nTPM: 194.4
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 487.1
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 425.0
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 395.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 387.3
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 370.6
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 360.9
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 357.9
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 356.8
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 350.3
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 347.7
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 343.1
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 340.3
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 331.1
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 329.2
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 316.2
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 316.1
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 302.0
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 297.3
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 297.0
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 295.4
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 293.8
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 290.7
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 289.8
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 288.7
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 287.3
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 286.1
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 285.5
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 283.2
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 283.1
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 282.3
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 282.0
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 280.4
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 279.4
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 278.9
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 277.3
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 273.8
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 272.8
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 271.3
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 270.5
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 270.3
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 270.2
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 269.6
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 269.5
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 264.5
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 263.3
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 262.7
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 261.7
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 261.4
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 256.8
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 255.2
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 253.9
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 253.8
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 250.7
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 250.5
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 246.0
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 242.8
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 242.8
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 242.0
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 241.6
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 241.6
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 241.4
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 241.2
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 240.5
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 239.8
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 239.3
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 237.3
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 236.0
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 235.2
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 234.1
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 233.8
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 233.8
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 233.6
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 233.3
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 231.8
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 230.9
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 229.7
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 229.3
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 228.2
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 227.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 226.9
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 226.7
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 226.3
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 225.9
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 225.4
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 225.4
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 223.2
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 222.4
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 221.8
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 219.9
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 219.9
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 218.8
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 217.9
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 216.7
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 216.1
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 215.4
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 214.8
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 214.2
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 213.9
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 213.4
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 212.7
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 211.3
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 210.0
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 209.8
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 209.6
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 209.6
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 208.9
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 208.3
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 207.7
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 207.0
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 205.6
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 205.2
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 204.2
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 204.0
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 203.5
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 203.5
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 201.6
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 201.6
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 201.1
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 200.4
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 199.2
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 195.6
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 195.4
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 194.8
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 193.9
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 193.4
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 193.2
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 192.4
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 192.3
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 189.9
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 189.6
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 187.4
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 187.1
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 186.9
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 186.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 186.2
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 185.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 183.1
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 182.5
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 179.3
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 177.4
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 173.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 173.0
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 172.5
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 172.4
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 170.4
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 164.9
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 164.6
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 163.9
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 162.6
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 159.5
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 157.8
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 157.7
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 156.2
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 155.9
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 155.2
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 154.4
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 153.5
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 151.8
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 149.2
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 147.8
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 147.1
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 146.1
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 144.6
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 142.3
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 141.6
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 140.9
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 140.5
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 138.8
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 138.1
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 134.8
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 134.4
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 134.4
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 133.2
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 131.6
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 129.1
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 125.6
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 122.6
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 122.3
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 121.8
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 121.0
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 118.8
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 118.8
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 117.9
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 117.3
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 112.5
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 112.1
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 111.4
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 111.2
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 110.4
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 108.0
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 107.8
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 106.9
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 106.4
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 105.9
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 105.0
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 100.4
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 100.2
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 100.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 96.2
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 95.5
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 95.4
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 95.2
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 94.2
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 94.2
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 94.1
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 92.7
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 91.5
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 91.4
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 90.8
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 89.4
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 88.2
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 88.0
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 88.0
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 85.7
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 85.2
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 83.9
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 83.3
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 83.3
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 82.7
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 82.0
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 80.9
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 80.0
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 78.5
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 78.2
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 76.3
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 75.8
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 75.7
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 75.6
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 68.0
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 67.4
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 66.0
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 64.9
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 60.8
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 59.5
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 59.4
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 51.9
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 51.4
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 50.8
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 49.6
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 46.3
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 37.3
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 37.2
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 35.7
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 34.5
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 27.3
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 27.2
Show allShow less
Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 136.4
Samples: 246

Max nTPM: 301.9
Min nTPM: 10.6
Std nTPM: 55.2
Median nTPM: 134.8
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 301.9
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 284.6
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 263.0
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 255.9
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 254.9
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 254.2
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 250.0
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 247.1
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 246.7
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 244.4
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 241.7
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 238.7
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 237.2
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 237.0
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 228.9
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 227.9
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 226.8
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 222.9
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 219.7
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 217.3
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 216.5
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 214.4
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 209.7
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 209.4
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 206.3
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 206.0
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 204.0
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 203.5
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 202.8
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 202.3
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 202.0
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 198.1
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 197.5
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 196.8
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 195.6
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 195.3
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 193.8
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 193.7
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 193.7
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 192.1
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 191.9
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 191.3
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 191.0
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 189.8
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 188.5
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 187.6
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 187.2
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 185.0
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 184.6
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 183.9
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 183.2
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 180.3
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 179.8
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 177.8
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 176.8
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 176.2
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 175.5
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 175.4
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 172.9
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 172.8
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 170.1
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 169.2
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 168.6
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 167.4
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 167.3
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 167.1
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 166.1
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 163.4
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 163.1
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 162.3
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 162.3
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 161.7
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 161.7
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 159.6
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 159.3
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 159.2
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 158.6
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 158.2
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 157.3
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 157.3
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 157.2
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 157.2
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 156.8
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 156.6
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 154.4
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 154.2
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 152.7
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 151.9
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 151.6
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 151.2
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 150.5
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 148.1
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 147.7
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 147.4
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 147.2
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 147.2
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 146.9
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 145.4
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 144.8
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 143.7
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 143.3
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 141.7
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 141.1
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 140.8
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 140.8
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 140.7
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 140.5
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 140.3
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 139.9
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 139.6
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 139.4
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 139.0
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 138.8
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 138.8
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 138.6
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 138.3
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 138.1
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 137.3
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 136.5
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 136.1
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 136.0
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 135.3
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 135.1
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 134.5
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 133.6
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 132.9
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 132.5
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 131.3
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 130.9
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 130.1
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 129.5
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 129.0
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 128.6
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 127.3
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 127.1
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 126.5
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 126.1
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 126.0
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 125.9
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 125.5
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 125.5
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 125.1
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 124.9
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 124.7
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 123.9
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 123.9
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 123.8
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 123.4
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 123.3
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 123.0
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 122.4
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 122.3
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 121.4
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 121.2
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 120.3
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 120.0
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 119.7
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 118.0
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 117.5
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 117.0
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 115.8
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 115.8
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 114.6
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 114.5
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 112.1
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 111.6
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 111.3
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 111.2
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 111.1
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 110.9
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 110.8
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 110.8
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 110.7
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 110.7
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 109.6
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 109.3
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 108.9
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 108.7
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 108.1
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 107.8
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 105.3
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 105.0
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 103.2
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 102.3
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 102.2
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 101.6
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 100.2
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 99.9
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 99.8
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 99.5
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 99.0
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 98.8
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 98.4
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 98.4
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 97.2
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 96.1
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 95.3
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 93.3
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 93.2
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 92.1
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 91.0
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 90.3
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 89.5
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 86.3
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 80.3
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 79.5
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 79.5
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 78.4
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 78.0
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 77.4
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 76.3
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 75.9
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 75.3
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 74.5
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 74.3
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 74.2
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 73.7
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 73.0
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 72.7
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 71.5
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 71.2
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 70.0
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 68.5
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 67.7
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 64.3
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 62.6
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 59.5
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 58.4
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 50.3
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 46.9
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 46.1
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 41.7
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 41.2
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 39.7
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 38.0
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 34.8
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 33.6
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 31.3
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 26.4
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 23.8
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 22.5
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 22.5
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 20.1
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 13.3
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 11.4
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 10.6
Show allShow less
Brain - Putamen (basal ganglia)
Average nTPM: 209.5
Samples: 205

Max nTPM: 422.2
Min nTPM: 19.1
Std nTPM: 89.5
Median nTPM: 214.8
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 422.2
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 410.2
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 384.4
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 377.8
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 371.1
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 370.1
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 365.9
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 364.9
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 364.5
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 362.5
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 360.4
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 354.0
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 349.1
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 345.7
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 345.5
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 341.8
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 325.8
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 322.9
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 319.2
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 317.4
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 311.8
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 310.0
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 309.8
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 309.8
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 308.1
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 307.6
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 306.6
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 305.6
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 303.6
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 300.9
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 300.2
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 300.1
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 298.8
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 296.5
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 295.8
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 294.4
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 293.2
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 291.9
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 290.8
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 290.4
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 290.1
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 289.7
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 287.0
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 286.8
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 286.7
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 282.3
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 280.0
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 278.1
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 276.5
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 275.6
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 275.2
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 273.0
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 272.5
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 270.2
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 269.6
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 268.2
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 268.0
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 266.8
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 264.6
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 263.8
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 263.0
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 261.6
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 260.9
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 259.9
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 258.9
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 258.3
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 258.3
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 258.2
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 256.4
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 255.7
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 253.5
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 251.7
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 251.5
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 251.4
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 250.8
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 249.9
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 249.8
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 249.4
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 248.0
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 247.9
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 247.8
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 247.5
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 247.0
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 246.2
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 244.9
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 244.0
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 240.0
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 239.6
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 239.0
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 237.6
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 235.0
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 233.1
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 232.4
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 230.8
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 229.1
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 228.4
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 222.9
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 220.9
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 219.3
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 219.1
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 216.4
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 215.2
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 214.8
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 214.7
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 214.2
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 213.6
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 212.6
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 212.1
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 211.3
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 211.1
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 207.6
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 205.1
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 204.6
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 202.5
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 202.2
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 201.6
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 201.0
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 198.5
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 197.9
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 197.2
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 197.2
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 194.6
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 189.1
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 188.6
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 187.3
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 186.9
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 186.6
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 185.3
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 184.6
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 183.9
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 183.6
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 177.9
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 176.7
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 176.7
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 175.3
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 172.5
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 171.0
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 167.9
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 167.2
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 167.0
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 166.5
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 166.5
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 166.4
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 164.2
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 162.7
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 162.6
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 161.9
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 157.5
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 156.5
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 154.7
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 151.3
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 149.1
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 146.8
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 143.1
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 139.9
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 136.4
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 135.4
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 130.4
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 128.7
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 127.8
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 127.5
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 125.8
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 117.8
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 116.5
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 115.7
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 110.8
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 107.2
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 106.1
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 104.5
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 103.7
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 102.6
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 99.5
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 99.4
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 98.8
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 98.0
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 97.6
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 95.3
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 95.0
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 93.1
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 90.3
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 84.9
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 83.6
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 82.2
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 81.9
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 81.8
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 79.3
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 77.8
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 75.2
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 74.3
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 73.5
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 66.6
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 66.1
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 62.6
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 62.4
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 59.6
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 56.9
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 55.1
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 53.2
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 52.4
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 51.7
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 41.7
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 40.5
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 39.6
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 21.3
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 19.1
Show allShow less

BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

299.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 99.5
FF:10164-103B2 76 years, female 99.5
Nucleus accumbens
Scaled Tags Per Million: 299.3
FF:10037-101F1 23-56 years, mixed 299.3
Putamen
Scaled Tags Per Million: 174.2
FF:10176-103C5 60 years, female 174.2
Globus pallidus
Scaled Tags Per Million: 71.8
FF:10175-103C4 60 years, female 97.3
FF:10161-103A8 76 years, female 46.4

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

159.1
Pig sample Sample description nTPM
Caudate
nTPM: 100.8
Samples: 4

Max nTPM: 121.1
Min nTPM: 71.7
Sample A Female 71.7
Sample B Female 108.0
Sample C Male 121.1
Sample D Male 102.3
Putamen
nTPM: 159.1
Samples: 4

Max nTPM: 219.6
Min nTPM: 119.9
Sample A Female 146.6
Sample B Female 119.9
Sample C Male 219.6
Sample D Male 150.2
Septum
nTPM: 90.7
Samples: 4

Max nTPM: 111.1
Min nTPM: 79.1
Sample A Female 79.1
Sample B Female 85.7
Sample C Male 111.1
Sample D Male 87.0
Ventral pallidum
nTPM: 145.4
Samples: 4

Max nTPM: 325.0
Min nTPM: 65.7
Sample A Female 73.0
Sample B Female 117.9
Sample C Male 325.0
Sample D Male 65.7

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

639.8
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 503.1
Samples: 4

Max nTPM: 523.4
Min nTPM: 471.9
Sample A Male 523.4
Sample B Male 510.9
Sample C Female 506.2
Sample D Female 471.9
Septum
nTPM: 338.4
Samples: 4

Max nTPM: 396.1
Min nTPM: 299.5
Sample A Male 396.1
Sample B Male 299.5
Sample C Female 338.3
Sample D Female 319.7
Ventral forebrain
nTPM: 639.8
Samples: 4

Max nTPM: 651.9
Min nTPM: 628.8
Sample A Male 631.9
Sample B Male 628.8
Sample C Female 646.5
Sample D Female 651.9

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

21.9
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 21.9
68193003 Antisense, RP_040922_01_D06, Mouse strain C57BL/6J (56 days, male) 21.9
67752308 Antisense, RP_040922_01_D06, Mouse strain C57BL/6J (56 days, male) 14.8
Pallidum
Expression energy: 19.2
68193003 Antisense, RP_040922_01_D06, Mouse strain C57BL/6J (56 days, male) 19.2
67752308 Antisense, RP_040922_01_D06, Mouse strain C57BL/6J (56 days, male) 15.9

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org