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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: High
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:1602.9 nTPM
HPA Brain:980.2 nTPM
GTEx:1602.9 nTPM
FANTOM5:494.5 Scaled Tags Per Million
Pig:1883.7 nTPM
Mouse:2634.7 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA041344Antibody HPA049132Antibody CAB013048
Glial cells Not detectedHighMedium
Neuronal cells LowMediumNot detected






BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

980.2
Sample id Sample description nTPM
Caudate nucleus
nTPM: 873.4
2481 Female, age 94, left hemisphere 1306.7
2288 Male, age 75, left hemisphere 1130.3
2290 Female, age 72, unknown 818.6
1781 Male, age 74, unknown 785.4
2846 Female, age 79, unknown 765.6
1854 Male, age 80, left hemisphere 753.3
1857 Female, age 85, left hemisphere 749.9
2289 Male, age 61, right hemisphere 677.0
Globus pallidus, externus
nTPM: 856.1
2772 Female, age 79, unknown 1180.5
1996 Male, age 80, right hemisphere 979.5
2646 Male, age 61, right hemisphere 861.2
2395 Male, age 75, both hemispheres 849.2
2567 Female, age 72, unknown 410.1
Globus pallidus, internus
nTPM: 915.5
2287 Male, age 75, right hemisphere 1284.5
2483 Female, age 94, right hemisphere 997.9
2778 Female, age 91, both hemispheres 961.6
1818 Male, age 74, unknown 955.9
2037 Male, age 80, right hemisphere 809.4
2111 Female, age 85, right hemisphere 787.6
2566 Female, age 72, unknown 611.4
Nucleus accumbens
nTPM: 980.2
2391 Female, age 94, left hemisphere 1406.3
2286 Male, age 75, left hemisphere 1365.7
2698 Female, age 72, unknown 1026.4
1856 Female, age 91, right hemisphere 974.0
1806 Female, age 85, left hemisphere 866.0
1783 Male, age 74, unknown 797.3
2824 Male, age 61, right hemisphere 718.7
2732 Male, age 80, right hemisphere 687.6
Nucleus basalis of Meynert
nTPM: 806.5
2821 Male, age 75, both hemispheres 1072.3
2484 Female, age 94, left hemisphere 793.6
2569 Male, age 61, both hemispheres 765.0
2393 Male, age 80, right hemisphere 595.0
Nucleus of the diagonal band
nTPM: 927.8
1812 Female, age 91, both hemispheres 1151.4
2775 Male, age 80, right hemisphere 1007.9
2195 Female, age 85, both hemispheres 940.3
1979 Male, age 74, unknown 877.2
2029 Male, age 61, right hemisphere 662.4
Putamen
nTPM: 771.7
2482 Female, age 94, left hemisphere 1291.3
1937 Female, age 91, right hemisphere 852.3
2647 Male, age 75, left hemisphere 743.0
2466 Female, age 79, unknown 695.5
1838 Male, age 80, right hemisphere 670.2
1829 Male, age 74, unknown 622.5
2489 Female, age 72, unknown 526.9
Septal nuclei
nTPM: 899.2
1960 Male, age 74, unknown 1094.4
2031 Female, age 72, unknown 1007.1
2629 Female, age 94, right hemisphere 1005.5
2009 Female, age 91, both hemispheres 944.7
2199 Male, age 80, right hemisphere 850.6
2059 Female, age 85, both hemispheres 823.8
2394 Male, age 61, left hemisphere 568.5
Stria terminalis, bed nucleus
nTPM: 857.6
1974 Female, age 91, both hemispheres 1077.9
2201 Male, age 74, unknown 839.7
2486 Female, age 94, both hemispheres 655.3

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1602.9
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 1463.0
Samples: 246

Max nTPM: 3977.0
Min nTPM: 914.3
Std nTPM: 359.8
Median nTPM: 1391.3
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 3977.0
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 3435.1
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 2822.9
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 2627.2
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 2599.3
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 2541.8
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 2518.7
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 2397.9
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 2353.2
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 2332.7
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 2189.7
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 2020.7
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 2017.9
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 2009.5
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 1942.3
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 1940.8
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 1920.9
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 1919.1
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 1904.5
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 1889.5
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 1882.1
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 1853.4
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 1834.6
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 1815.2
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 1810.5
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 1797.4
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 1794.0
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 1789.3
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 1769.0
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 1725.8
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 1712.2
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 1709.6
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 1701.2
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 1698.7
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 1686.1
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 1676.9
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 1667.3
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 1664.3
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 1662.4
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 1660.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 1656.4
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 1650.2
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 1626.2
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 1625.7
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 1625.3
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 1623.1
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 1620.0
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 1616.9
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 1615.4
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 1614.7
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 1612.7
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 1608.3
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 1608.0
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 1607.6
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 1605.0
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 1600.9
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 1598.7
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 1597.3
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 1592.2
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 1578.6
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 1577.2
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 1554.1
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 1548.9
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 1548.2
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 1543.3
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 1543.0
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 1535.8
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 1529.9
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 1529.8
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 1526.5
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 1526.0
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 1520.5
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 1520.4
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 1515.6
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 1509.2
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 1502.6
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 1500.8
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 1499.3
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 1499.3
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 1498.9
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 1497.6
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 1497.1
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 1496.5
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 1495.3
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 1490.0
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 1486.0
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 1484.8
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 1484.4
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 1481.1
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 1472.6
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 1470.2
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 1469.1
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 1465.7
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 1465.5
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 1465.1
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 1462.6
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 1462.1
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 1461.4
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 1460.9
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 1459.1
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 1452.7
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 1448.7
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 1446.3
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 1446.1
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 1445.3
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 1443.5
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 1438.0
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 1437.8
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 1427.6
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 1426.1
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 1425.9
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 1425.2
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 1421.4
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 1417.6
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 1415.2
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 1414.7
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 1412.9
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 1405.2
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 1400.4
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 1398.9
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 1398.6
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 1396.6
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 1394.4
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 1388.2
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 1387.1
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 1385.8
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 1374.1
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 1373.6
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 1370.1
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 1368.9
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 1365.7
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 1365.3
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 1364.1
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 1359.0
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 1355.8
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 1355.2
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 1353.9
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 1351.2
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 1350.2
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 1349.4
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 1347.6
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 1344.3
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 1344.2
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 1343.4
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 1340.3
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 1339.7
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 1337.9
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 1337.4
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 1336.8
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 1335.0
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 1329.3
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 1327.9
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 1324.5
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 1324.2
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 1322.2
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 1321.1
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 1320.5
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 1318.5
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 1316.4
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 1315.0
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 1311.8
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 1311.0
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 1309.7
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 1308.7
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 1303.3
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 1301.0
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 1299.6
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 1298.4
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 1296.1
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 1289.8
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 1286.7
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 1286.6
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 1286.4
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 1285.2
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 1284.9
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 1279.9
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 1278.3
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 1277.1
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 1273.8
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 1264.3
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 1263.2
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 1259.7
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 1259.4
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 1259.1
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 1257.9
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 1257.5
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 1254.6
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 1253.0
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 1251.6
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 1251.2
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 1247.4
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 1246.8
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 1244.8
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 1239.0
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 1238.6
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 1236.4
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 1236.1
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 1235.2
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 1235.0
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 1219.6
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 1216.9
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 1216.5
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 1211.9
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 1207.3
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 1207.0
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 1206.3
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 1204.4
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 1203.6
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 1199.6
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 1196.3
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 1192.0
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 1191.7
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 1188.9
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 1186.7
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 1185.2
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 1181.8
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 1178.2
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 1177.5
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 1175.7
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 1170.2
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 1165.5
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 1164.3
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 1154.0
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 1152.2
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 1146.8
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 1145.7
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 1145.0
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 1139.4
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 1138.4
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 1126.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 1105.4
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 1103.4
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 1093.8
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 1088.5
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 1066.6
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 1054.7
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 1048.4
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 1037.1
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 1034.3
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 1021.4
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 1020.5
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 1008.0
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 1000.1
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 985.1
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 960.5
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 914.3
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 1602.9
Samples: 246

Max nTPM: 3592.1
Min nTPM: 763.8
Std nTPM: 374.9
Median nTPM: 1556.5
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 3592.1
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 3417.9
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 3235.1
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 2852.0
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 2800.8
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 2720.4
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 2607.5
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 2492.6
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 2402.4
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 2384.2
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 2371.6
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 2315.1
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 2271.0
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 2256.8
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 2216.8
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 2121.6
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 2025.6
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 2025.4
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 2025.3
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 2023.6
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 2019.1
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 2007.9
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 2005.7
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 1993.2
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 1964.0
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 1948.9
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 1932.0
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 1930.2
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 1929.4
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 1925.0
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 1910.1
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 1904.5
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 1898.9
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 1898.2
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 1891.9
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 1891.2
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 1889.9
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 1876.9
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 1874.0
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 1862.5
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 1858.0
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 1857.9
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 1854.3
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 1849.7
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 1836.4
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 1821.2
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 1815.1
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 1811.1
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 1810.1
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 1807.8
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 1806.2
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 1792.4
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 1783.4
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 1781.8
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 1779.4
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 1777.4
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 1774.3
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 1772.4
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 1751.2
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 1749.9
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 1746.8
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 1742.7
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 1740.6
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 1740.5
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 1725.0
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 1719.3
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 1718.1
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 1711.5
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 1701.2
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 1701.0
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 1692.9
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 1692.0
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 1691.2
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 1690.2
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 1684.9
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 1679.5
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 1678.4
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 1673.2
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 1672.4
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 1671.3
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 1668.2
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 1666.6
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 1656.6
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 1652.8
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 1646.9
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 1646.0
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 1644.8
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 1643.6
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 1643.3
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 1639.9
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 1637.2
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 1633.8
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 1628.2
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 1627.4
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 1623.6
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 1623.0
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 1619.2
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 1616.3
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 1616.1
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 1615.5
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 1611.6
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 1610.6
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 1610.5
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 1604.4
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 1597.8
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 1597.2
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 1594.9
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 1587.8
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 1586.9
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 1585.1
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 1584.4
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 1580.2
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 1579.5
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 1576.9
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 1575.1
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 1570.3
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 1569.9
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 1567.8
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 1566.3
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 1564.3
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 1562.0
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 1558.6
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 1557.0
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 1556.0
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 1554.2
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 1553.9
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 1548.0
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 1542.6
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 1539.9
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 1529.7
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 1525.1
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 1523.7
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 1522.8
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 1518.2
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 1512.3
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 1510.0
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 1508.1
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 1505.7
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 1502.8
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 1500.7
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 1498.1
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 1495.6
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 1495.0
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 1492.8
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 1490.9
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 1489.9
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 1488.1
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 1486.4
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 1484.9
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 1483.3
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 1482.5
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 1482.0
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 1480.7
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 1480.0
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 1476.1
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 1473.7
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 1472.5
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 1470.2
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 1467.6
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 1459.6
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 1458.9
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 1458.5
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 1457.0
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 1455.6
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 1449.0
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 1448.5
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 1442.8
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 1442.1
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 1436.7
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 1434.9
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 1433.2
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 1433.2
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 1430.4
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 1426.6
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 1418.2
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 1415.2
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 1414.9
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 1412.0
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 1409.2
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 1409.0
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 1403.4
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 1402.9
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 1400.6
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 1395.0
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 1391.8
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 1390.9
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 1389.5
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 1388.0
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 1385.9
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 1375.3
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 1373.8
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 1366.6
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 1355.2
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 1346.2
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 1345.0
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 1342.6
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 1342.0
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 1340.1
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 1334.2
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 1333.4
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 1330.5
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 1325.8
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 1323.4
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 1322.3
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 1320.8
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 1315.6
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 1315.4
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 1312.0
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 1306.4
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 1302.8
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 1289.8
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 1285.2
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 1273.7
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 1256.5
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 1254.1
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 1252.7
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 1248.0
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 1247.3
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 1242.1
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 1239.5
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 1238.8
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 1227.6
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 1227.1
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 1222.4
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 1218.8
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 1204.9
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 1202.5
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 1183.8
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 1182.3
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 1169.9
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 1156.5
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 1153.8
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 1146.2
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 1123.2
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 1117.7
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 1111.6
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 1110.5
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 1106.7
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 1095.1
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 1084.9
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 1044.2
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 1009.5
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 965.7
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 890.7
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 864.8
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 763.8
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Brain - Putamen (basal ganglia)
Average nTPM: 1508.2
Samples: 205

Max nTPM: 3388.2
Min nTPM: 919.9
Std nTPM: 329.7
Median nTPM: 1454.5
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 3388.2
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 3214.2
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 2844.8
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 2457.3
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 2290.6
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 2243.1
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 2228.5
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 2145.8
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 2118.3
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 2076.4
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 2063.1
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 2006.2
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 1970.2
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 1966.9
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 1965.9
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 1929.9
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 1921.8
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 1885.4
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 1878.5
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 1870.9
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 1867.8
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 1866.4
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 1863.6
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 1819.4
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 1814.4
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 1793.9
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 1787.6
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 1767.1
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 1764.9
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 1762.1
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 1754.7
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 1754.3
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 1752.4
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 1737.0
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 1730.6
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 1723.6
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 1712.3
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 1711.4
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 1710.0
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 1703.8
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 1686.3
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 1677.3
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 1664.3
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 1663.3
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 1660.6
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 1659.1
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 1656.9
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 1632.0
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 1628.2
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 1624.0
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 1623.6
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 1622.1
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 1619.4
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 1616.2
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 1615.7
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 1612.9
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 1610.3
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 1609.2
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 1603.5
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 1600.4
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 1597.8
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 1594.8
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 1588.0
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 1582.7
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 1577.9
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 1577.2
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 1565.9
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 1557.6
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 1556.8
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 1554.7
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 1554.6
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 1554.4
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 1551.5
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 1542.4
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 1538.2
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 1536.8
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 1535.7
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 1530.7
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 1528.6
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 1525.3
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 1517.2
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 1514.7
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 1514.7
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 1514.3
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 1510.9
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 1509.3
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 1506.4
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 1502.5
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 1499.0
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 1491.6
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 1484.6
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 1482.3
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 1480.2
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 1477.9
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 1477.7
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 1476.7
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 1470.7
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 1470.4
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 1465.5
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 1460.6
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 1460.5
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 1456.1
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 1454.5
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 1453.7
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 1453.6
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 1448.7
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 1445.7
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 1445.2
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 1444.6
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 1441.4
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 1432.5
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 1431.3
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 1419.5
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 1419.3
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 1412.9
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 1410.5
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 1410.5
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 1407.0
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 1406.8
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 1403.6
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 1398.5
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 1398.2
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 1397.7
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 1397.0
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 1396.4
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 1395.4
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 1385.7
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 1383.0
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 1382.1
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 1381.8
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 1381.0
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 1377.4
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 1375.4
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 1370.9
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 1366.9
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 1366.7
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 1364.7
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 1357.3
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 1356.4
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 1354.7
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 1352.7
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 1351.6
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 1347.0
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 1346.5
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 1342.4
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 1341.7
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 1341.2
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 1341.0
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 1340.1
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 1335.4
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 1334.8
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 1332.9
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 1332.8
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 1329.5
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 1328.7
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 1325.0
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 1321.9
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 1317.0
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 1315.1
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 1313.4
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 1312.8
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 1311.3
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 1307.2
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 1302.2
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 1298.6
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 1292.9
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 1292.0
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 1271.8
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 1271.0
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 1268.9
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 1249.3
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 1249.0
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 1247.0
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 1237.8
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 1236.4
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 1233.0
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 1214.5
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 1209.5
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 1201.0
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 1189.9
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 1187.9
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 1180.2
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 1178.6
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 1176.8
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 1171.5
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 1169.0
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 1163.5
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 1157.8
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 1140.0
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 1140.0
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 1137.4
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 1128.3
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 1128.1
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 1121.3
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 1108.4
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 1106.3
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 1070.2
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 1068.3
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 1065.0
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 1052.8
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 1027.3
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 1001.7
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 1001.2
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 928.8
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 919.9
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

494.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 437.2
FF:10164-103B2 76 years, female 437.2
Nucleus accumbens
Scaled Tags Per Million: 349.4
FF:10037-101F1 23-56 years, mixed 349.4
Putamen
Scaled Tags Per Million: 494.5
FF:10176-103C5 60 years, female 494.5
Globus pallidus
Scaled Tags Per Million: 323.9
FF:10175-103C4 60 years, female 350.7
FF:10161-103A8 76 years, female 297.1

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1883.7
Pig sample Sample description nTPM
Caudate
nTPM: 1627.6
Samples: 4

Max nTPM: 1812.7
Min nTPM: 1390.1
Sample A Female 1510.2
Sample B Female 1812.7
Sample C Male 1797.3
Sample D Male 1390.1
Putamen
nTPM: 1883.7
Samples: 4

Max nTPM: 2344.1
Min nTPM: 1542.5
Sample A Female 1890.8
Sample B Female 1542.5
Sample C Male 2344.1
Sample D Male 1757.4
Septum
nTPM: 1693.8
Samples: 4

Max nTPM: 1838.5
Min nTPM: 1531.9
Sample A Female 1838.5
Sample B Female 1615.3
Sample C Male 1789.3
Sample D Male 1531.9
Ventral pallidum
nTPM: 1603.7
Samples: 4

Max nTPM: 1906.1
Min nTPM: 1404.3
Sample A Female 1482.4
Sample B Female 1906.1
Sample C Male 1621.9
Sample D Male 1404.3

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

2634.7
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 2506.1
Samples: 4

Max nTPM: 2574.0
Min nTPM: 2409.4
Sample A Male 2557.5
Sample B Male 2574.0
Sample C Female 2409.4
Sample D Female 2483.3
Septum
nTPM: 2634.7
Samples: 4

Max nTPM: 2798.2
Min nTPM: 2458.3
Sample A Male 2458.3
Sample B Male 2798.2
Sample C Female 2724.3
Sample D Female 2557.9
Ventral forebrain
nTPM: 2587.1
Samples: 4

Max nTPM: 2771.2
Min nTPM: 2421.8
Sample A Male 2421.8
Sample B Male 2644.3
Sample C Female 2771.2
Sample D Female 2511.1

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