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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
1276.1
nTPM
FANTOM5:
563.2
Scaled Tags Per Million
Pig:
2426.1
nTPM
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
1276.1
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 852.9
2188
Female, age 91, both hemispheres
971.5
2090
Male, age 80, both hemispheres
875.9
2301
Female, age 85, both hemispheres
820.5
1984
Male, age 76, both hemispheres
743.7
Dorsal cochlear nucleus nTPM: 770.1
2187
Female, age 91, both hemispheres
947.6
2802
Male, age 74, right hemisphere
802.8
2058
Male, age 76, both hemispheres
782.7
2370
Male, age 61, both hemispheres
693.7
2378
Male, age 80, both hemispheres
624.0
Dorsal tegmental nucleus nTPM: 963.3
2083
Male, age 80, both hemispheres
1134.4
2358
Male, age 61, both hemispheres
1030.1
2326
Male, age 74, both hemispheres
931.7
1936
Male, age 76, left hemisphere
757.0
Dorsolateral tegmental area nTPM: 902.1
2751
Female, age 85, both hemispheres
1053.1
2654
Male, age 80, both hemispheres
987.7
2337
Male, age 61, both hemispheres
875.0
2141
Male, age 76, both hemispheres
869.9
2360
Male, age 74, both hemispheres
724.8
Kolliker-Fuse nucleus nTPM: 982.1
2163
Male, age 80, both hemispheres
1127.7
2793
Female, age 91, left hemisphere
1010.4
2315
Male, age 76, right hemisphere
808.3
Lateral lemniscal nuclei nTPM: 928.9
2169
Male, age 76, both hemispheres
1155.1
2746
Female, age 85, left hemisphere
982.6
2036
Male, age 80, both hemispheres
936.8
2453
Male, age 74, right hemisphere
837.3
2320
Female, age 91, left hemisphere
732.9
Lateral parabrachial nucleus nTPM: 885.2
2139
Female, age 85, right hemisphere
1156.9
2013
Male, age 80, both hemispheres
947.3
2792
Male, age 76, both hemispheres
751.3
2790
Male, age 61, both hemispheres
685.5
Lateral vestibular nucleus nTPM: 969.7
2311
Male, age 80, both hemispheres
987.8
2184
Male, age 76, both hemispheres
951.7
Locus coeruleus nTPM: 1276.1
2014
Male, age 55, unknown
1568.6
2123
Female, age 91, both hemispheres
1526.0
2720
Male, age 74, both hemispheres
1326.2
1980
Male, age 76, both hemispheres
1238.6
2788
Male, age 74, unknown
1212.5
2317
Female, age 72, unknown
1061.7
2162
Male, age 80, both hemispheres
999.2
Medial parabrachial nucleus nTPM: 968.3
2170
Female, age 91, both hemispheres
1129.1
2854
Male, age 80, both hemispheres
1045.4
2463
Female, age 85, right hemisphere
939.0
2156
Male, age 61, both hemispheres
927.6
2786
Male, age 76, both hemispheres
800.4
Medial periolivary nuclei nTPM: 949.0
2171
Female, age 85, both hemispheres
1218.9
2063
Male, age 76, both hemispheres
1097.4
2791
Male, age 74, right hemisphere
1007.8
2081
Male, age 80, both hemispheres
748.4
2458
Female, age 91, both hemispheres
672.6
Motor facial nucleus nTPM: 970.2
2365
Male, age 74, right hemisphere
1190.6
2062
Male, age 76, both hemispheres
1156.2
2697
Female, age 85, both hemispheres
1068.3
2126
Male, age 61, both hemispheres
923.4
2327
Male, age 80, both hemispheres
745.9
2795
Female, age 91, both hemispheres
737.2
Motor trigeminal nucleus nTPM: 822.3
2335
Male, age 61, both hemispheres
945.2
2079
Male, age 80, both hemispheres
871.8
2560
Male, age 74, both hemispheres
791.2
2309
Male, age 76, both hemispheres
781.0
2321
Female, age 91, both hemispheres
722.2
Nuclei of the trapezoid body nTPM: 938.3
1983
Male, age 76, both hemispheres
1215.5
2735
Female, age 85, both hemispheres
1098.2
2159
Male, age 61, both hemispheres
973.3
2166
Male, age 80, both hemispheres
852.4
2368
Female, age 91, both hemispheres
552.1
Nucleus raphe magnus nTPM: 1005.4
2172
Female, age 85, both hemispheres
1301.2
2160
Male, age 61, both hemispheres
1122.2
2455
Male, age 74, both hemispheres
1103.6
2051
Male, age 76, both hemispheres
958.2
2328
Male, age 80, both hemispheres
888.9
2459
Female, age 91, both hemispheres
658.2
Paramedian reticular nucleus nTPM: 1004.3
2050
Female, age 85, both hemispheres
1226.4
2057
Male, age 80, both hemispheres
1045.1
2313
Male, age 61, both hemispheres
935.4
2052
Male, age 76, both hemispheres
810.4
Pedunculopontine tegmental nucleus nTPM: 1041.4
2334
Male, age 80, both hemispheres
1064.3
1921
Female, age 85, both hemispheres
1030.5
2338
Male, age 61, both hemispheres
1029.5
Pontine nuclei nTPM: 1124.9
2787
Female, age 85, both hemispheres
1518.1
1863
Male, age 55, unknown
1415.8
2109
Female, age 72, unknown
1260.0
2454
Male, age 74, left hemisphere
1126.6
1968
Male, age 76, left hemisphere
1078.5
2727
Male, age 61, right hemisphere
1009.6
2319
Female, age 91, both hemispheres
843.8
2115
Male, age 80, left hemisphere
747.1
Pontine raphe nucleus nTPM: 1041.0
2122
Female, age 85, midline
1145.3
2853
Male, age 76, midline
936.8
Posteroventral cochlear nucleus nTPM: 891.1
2752
Female, age 85, both hemispheres
1034.1
2341
Male, age 80, both hemispheres
909.0
2070
Male, age 76, both hemispheres
892.1
2135
Female, age 91, both hemispheres
869.3
2371
Male, age 61, both hemispheres
751.1
Principal sensory trigeminal nucleus nTPM: 907.3
2008
Male, age 80, left hemisphere
962.0
2158
Male, age 61, both hemispheres
948.6
2324
Male, age 76, both hemispheres
894.6
2367
Female, age 91, left hemisphere
824.1
Reticular pontine nucleus, caudal nTPM: 887.2
2092
Male, age 76, both hemispheres
1077.6
2559
Male, age 74, both hemispheres
952.7
2457
Female, age 91, both hemispheres
761.7
2332
Male, age 80, right hemisphere
756.9
Reticular pontine nucleus, oral nTPM: 1003.3
1939
Male, age 80, both hemispheres
1113.3
2012
Female, age 85, both hemispheres
1098.1
2361
Male, age 74, both hemispheres
944.3
2366
Female, age 91, both hemispheres
939.4
2167
Male, age 76, both hemispheres
921.3
Reticulotegmental nucleus nTPM: 850.4
2325
Male, age 76, both hemispheres
946.6
2322
Female, age 91, both hemispheres
873.9
2333
Male, age 80, both hemispheres
825.5
2452
Male, age 74, both hemispheres
755.7
Spinal trigeminal nucleus, oral nTPM: 914.4
2164
Male, age 80, both hemispheres
1003.2
2737
Female, age 85, both hemispheres
943.7
1978
Male, age 76, both hemispheres
796.4
Subcoeruleus area nTPM: 918.3
1958
Male, age 80, both hemispheres
1144.2
2323
Female, age 91, left hemisphere
1053.5
2369
Female, age 85, left hemisphere
981.0
2089
Male, age 76, left hemisphere
746.5
2451
Male, age 74, both hemispheres
666.5
Superior olive nTPM: 914.3
1875
Female, age 85, both hemispheres
1167.1
2364
Male, age 74, right hemisphere
1014.7
2020
Male, age 76, both hemispheres
964.1
2329
Male, age 80, right hemisphere
753.3
2561
Female, age 91, both hemispheres
672.3
Ventral periolivary nuclei nTPM: 972.1
2130
Female, age 85, both hemispheres
1162.3
2165
Male, age 80, both hemispheres
1084.4
2023
Male, age 76, both hemispheres
1005.4
2794
Female, age 91, left hemisphere
636.1
Ventrolateral tegmental area, A5 NE cell group nTPM: 933.9
2840
Female, age 85, both hemispheres
1094.3
2359
Male, age 61, both hemispheres
1064.3
2449
Male, age 74, both hemispheres
1019.4
1959
Male, age 76, both hemispheres
1009.1
2161
Male, age 80, both hemispheres
803.5
2456
Female, age 91, both hemispheres
612.6
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
The Human Protein Atlas project is funded
