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RPS21
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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:1176.2 nTPM
HPA Brain:432.7 nTPM
GTEx:1176.2 nTPM
FANTOM5:335.5 Scaled Tags Per Million
Pig:449.4 nTPM
Mouse:2006.5 nTPM
Allen mouse:5.4 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA003371
Glial cells Not detected
Neuronal cells High



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

432.7
Sample id Sample description nTPM
Caudate nucleus
nTPM: 306.6
2481 Female, age 94, left hemisphere 398.5
2290 Female, age 72, unknown 360.5
1781 Male, age 74, unknown 349.4
2846 Female, age 79, unknown 342.6
1854 Male, age 80, left hemisphere 288.6
1857 Female, age 85, left hemisphere 278.3
2288 Male, age 75, left hemisphere 243.9
2289 Male, age 61, right hemisphere 190.8
Globus pallidus, externus
nTPM: 432.7
2772 Female, age 79, unknown 743.5
1996 Male, age 80, right hemisphere 557.0
2395 Male, age 75, both hemispheres 313.3
2567 Female, age 72, unknown 298.8
2646 Male, age 61, right hemisphere 251.0
Globus pallidus, internus
nTPM: 407.7
2483 Female, age 94, right hemisphere 522.3
2287 Male, age 75, right hemisphere 516.9
2778 Female, age 91, both hemispheres 415.7
1818 Male, age 74, unknown 406.1
2037 Male, age 80, right hemisphere 397.9
2111 Female, age 85, right hemisphere 305.4
2566 Female, age 72, unknown 289.6
Nucleus accumbens
nTPM: 315.1
1783 Male, age 74, unknown 400.9
1806 Female, age 85, left hemisphere 370.2
2286 Male, age 75, left hemisphere 323.5
2391 Female, age 94, left hemisphere 307.5
1856 Female, age 91, right hemisphere 294.4
2732 Male, age 80, right hemisphere 287.7
2698 Female, age 72, unknown 282.0
2824 Male, age 61, right hemisphere 255.1
Nucleus basalis of Meynert
nTPM: 272.0
2484 Female, age 94, left hemisphere 351.5
2821 Male, age 75, both hemispheres 259.5
2569 Male, age 61, both hemispheres 243.8
2393 Male, age 80, right hemisphere 233.1
Nucleus of the diagonal band
nTPM: 292.2
2775 Male, age 80, right hemisphere 351.9
1812 Female, age 91, both hemispheres 329.2
2195 Female, age 85, both hemispheres 282.4
1979 Male, age 74, unknown 274.0
2029 Male, age 61, right hemisphere 223.4
Putamen
nTPM: 281.8
2466 Female, age 79, unknown 409.8
2482 Female, age 94, left hemisphere 365.0
1937 Female, age 91, right hemisphere 297.7
1838 Male, age 80, right hemisphere 266.8
2647 Male, age 75, left hemisphere 222.7
1829 Male, age 74, unknown 211.6
2489 Female, age 72, unknown 199.0
Septal nuclei
nTPM: 275.9
1960 Male, age 74, unknown 342.0
2031 Female, age 72, unknown 335.9
2059 Female, age 85, both hemispheres 278.6
2009 Female, age 91, both hemispheres 273.6
2199 Male, age 80, right hemisphere 270.8
2394 Male, age 61, left hemisphere 235.6
2629 Female, age 94, right hemisphere 194.5
Stria terminalis, bed nucleus
nTPM: 258.2
1974 Female, age 91, both hemispheres 358.4
2486 Female, age 94, both hemispheres 242.4
2201 Male, age 74, unknown 173.7

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1176.2
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 985.0
Samples: 246

Max nTPM: 3107.1
Min nTPM: 477.1
Std nTPM: 346.6
Median nTPM: 909.6
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 3107.1
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 2810.0
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 2484.6
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 2308.2
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 2118.4
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 2091.2
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 1997.7
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 1737.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 1648.0
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 1585.0
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 1557.1
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 1546.6
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 1504.4
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 1487.0
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 1475.4
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 1422.0
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 1414.6
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 1403.0
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 1400.0
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 1397.2
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 1396.9
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 1372.6
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 1365.8
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 1363.1
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 1356.9
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 1339.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 1334.7
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 1332.3
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 1316.0
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 1314.6
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 1305.9
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 1302.9
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 1293.5
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 1287.5
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 1278.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 1268.3
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 1263.4
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 1256.5
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 1245.2
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 1234.2
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 1231.8
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 1213.8
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 1211.0
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 1208.5
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 1199.5
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 1188.6
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 1185.0
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 1174.1
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 1170.6
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 1162.4
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 1159.5
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 1149.2
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 1136.4
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 1136.3
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 1129.3
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 1125.1
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 1125.1
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 1120.9
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 1116.9
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 1115.5
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 1115.2
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 1110.1
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 1110.0
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 1095.7
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 1091.6
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 1089.0
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 1082.7
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 1081.6
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 1078.5
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 1077.8
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 1067.3
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 1066.9
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 1064.3
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 1061.3
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 1053.6
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 1042.5
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 1037.1
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 1036.4
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 1034.9
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 1024.8
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 1019.8
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 1014.5
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 1013.1
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 1004.7
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 1001.8
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 1001.6
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 998.2
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 993.8
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 987.4
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 983.0
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 981.5
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 980.8
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 979.2
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 976.9
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 967.2
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 961.2
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 957.7
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 953.7
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 952.0
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 943.4
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 943.4
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 942.9
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 942.5
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 942.4
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 940.2
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 936.8
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 936.6
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 935.5
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 934.4
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 932.5
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 931.3
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 930.3
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 925.4
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 923.3
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 923.1
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 921.5
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 921.2
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 920.8
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 920.3
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 919.8
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 916.8
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 916.2
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 911.5
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 907.6
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 904.4
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 903.4
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 900.9
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 898.1
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 897.6
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 897.3
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 897.1
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 896.3
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 894.5
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 891.9
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 891.2
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 891.0
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 886.7
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 882.1
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 880.6
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 879.8
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 874.3
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 867.6
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 867.0
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 865.0
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 864.5
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 863.9
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 860.4
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 854.6
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 854.0
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 852.3
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 851.8
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 851.2
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 849.3
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 848.9
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 846.2
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 844.6
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 843.6
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 834.9
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 831.2
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 830.8
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 827.1
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 826.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 825.7
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 823.9
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 821.3
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 820.2
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 819.0
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 818.4
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 816.4
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 813.3
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 812.8
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 810.4
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 805.2
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 803.9
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 803.9
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 800.9
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 800.0
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 797.2
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 794.6
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 794.4
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 793.6
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 791.0
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 790.1
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 788.2
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 787.5
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 780.1
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 779.9
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 778.8
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 777.1
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 774.2
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 767.5
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 767.5
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 760.5
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 760.5
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 760.5
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 760.0
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 759.3
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 758.7
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 758.1
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 757.1
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 756.5
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 754.1
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 749.2
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 745.7
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 740.1
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 738.8
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 734.1
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 734.0
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 733.7
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 732.6
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 730.1
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 726.7
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 723.6
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 714.6
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 710.0
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 704.8
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 691.0
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 690.9
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 682.7
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 675.9
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 671.7
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 656.4
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 654.0
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 653.6
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 648.7
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 648.7
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 648.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 640.7
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 640.6
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 637.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 629.4
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 620.3
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 615.2
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 608.4
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 605.9
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 587.2
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 585.5
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 568.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 545.4
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 542.6
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 528.3
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 526.5
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 513.0
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 497.7
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 493.0
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 477.1
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 1176.2
Samples: 246

Max nTPM: 4424.1
Min nTPM: 553.9
Std nTPM: 481.1
Median nTPM: 1054.4
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 4424.1
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 4285.1
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 3481.8
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 3029.9
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 2457.1
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 2319.9
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 2270.9
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 2104.8
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 1971.7
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 1932.5
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 1912.8
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 1894.9
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 1842.5
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 1839.2
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 1837.5
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 1771.9
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 1766.4
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 1734.1
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 1706.0
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 1679.5
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 1666.7
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 1636.1
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 1634.2
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 1627.4
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 1619.5
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 1609.0
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 1607.9
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 1592.7
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 1576.9
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 1546.0
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 1545.9
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 1542.8
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 1540.0
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 1527.3
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 1524.2
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 1523.2
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 1518.7
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 1514.8
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 1475.8
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 1461.3
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 1456.6
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 1451.6
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 1451.3
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 1427.9
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 1427.3
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 1422.7
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 1422.6
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 1421.4
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 1419.1
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 1419.1
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 1414.6
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 1414.3
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 1401.4
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 1396.5
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 1393.0
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 1388.9
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 1388.3
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 1386.7
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 1378.2
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 1376.8
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 1353.8
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 1351.2
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 1342.4
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 1341.8
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 1338.7
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 1338.1
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 1334.4
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 1326.5
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 1326.5
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 1321.8
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 1320.1
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 1317.8
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 1310.7
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 1288.9
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 1281.7
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 1279.8
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 1273.2
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 1268.8
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 1266.7
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 1260.7
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 1249.5
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 1248.1
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 1246.0
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 1245.2
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 1237.6
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 1236.9
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 1234.2
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 1234.2
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 1210.3
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 1209.7
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 1192.7
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 1190.6
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 1190.5
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 1186.5
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 1174.5
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 1174.4
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 1171.0
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 1165.1
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 1163.7
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 1159.1
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 1151.0
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 1143.8
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 1142.8
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 1142.0
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 1141.9
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 1133.9
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 1130.7
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 1130.2
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 1127.1
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 1121.3
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 1115.6
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 1107.6
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 1106.4
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 1101.5
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 1098.6
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 1091.9
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 1084.7
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 1076.7
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 1076.6
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 1074.3
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 1071.6
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 1063.3
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 1054.8
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 1054.0
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 1051.3
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 1049.4
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 1049.0
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 1044.4
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 1044.0
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 1042.4
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 1042.2
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 1040.6
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 1039.6
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 1036.2
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 1029.1
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 1028.7
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 1027.2
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 1026.7
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 1021.5
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 1019.8
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 1018.9
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 1015.3
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 1009.9
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 1006.6
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 1002.0
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 991.6
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 988.0
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 987.2
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 981.2
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 980.3
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 978.7
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 978.0
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 977.1
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 975.9
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 974.5
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 971.0
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 970.0
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 968.4
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 967.3
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 966.0
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 964.4
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 959.7
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 957.7
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 957.2
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 955.3
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 953.5
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 946.2
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 946.0
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 936.3
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 932.6
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 931.4
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 931.1
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 931.1
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 928.8
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 926.3
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 925.3
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 924.1
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 921.7
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 914.6
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 906.1
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 902.9
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 902.9
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 898.0
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 897.4
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 897.1
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 895.7
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 894.2
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 891.8
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 888.2
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 882.4
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 880.3
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 878.8
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 876.9
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 875.1
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 870.0
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 868.2
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 854.0
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 851.5
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 848.4
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 843.7
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 840.8
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 840.1
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 839.9
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 839.6
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 829.3
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 827.9
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 818.9
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 815.5
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 811.8
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 810.8
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 810.2
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 803.1
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 801.9
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 799.8
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 798.2
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 797.5
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 793.6
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 788.7
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 774.8
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 771.5
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 770.1
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 762.6
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 762.4
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 759.7
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 759.5
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 758.0
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 755.4
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 740.9
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 740.3
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 726.9
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 719.3
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 716.7
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 695.1
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 694.9
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 694.4
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 672.1
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 667.7
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 661.9
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 653.1
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 644.8
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 588.6
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 584.0
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 574.1
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 562.6
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 557.2
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 553.9
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Brain - Putamen (basal ganglia)
Average nTPM: 1079.1
Samples: 205

Max nTPM: 3485.5
Min nTPM: 496.7
Std nTPM: 351.0
Median nTPM: 999.1
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 3485.5
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 2499.7
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 2154.9
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 2117.3
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 2017.2
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 1900.2
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 1834.4
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 1800.5
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 1679.8
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 1648.9
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 1621.0
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 1583.1
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 1569.6
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 1564.8
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 1558.0
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 1552.3
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 1542.3
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 1517.0
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 1512.7
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 1508.3
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 1467.4
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 1455.9
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 1453.3
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 1438.5
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 1410.1
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 1410.0
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 1401.7
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 1399.0
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 1379.0
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 1369.1
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 1367.1
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 1362.8
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 1356.7
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 1346.3
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 1342.2
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 1336.9
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 1324.2
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 1322.5
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 1314.3
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 1312.0
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 1287.3
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 1284.5
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 1274.4
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 1273.8
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 1271.1
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 1264.0
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 1261.8
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 1256.3
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 1241.0
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 1239.7
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 1229.0
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 1224.1
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 1220.4
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 1216.2
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 1201.1
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 1188.1
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 1187.5
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 1179.4
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 1174.0
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 1170.0
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 1168.6
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 1167.3
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 1164.0
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 1163.0
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 1162.9
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 1153.6
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 1149.0
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 1148.0
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 1145.9
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 1145.2
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 1144.5
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 1144.1
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 1141.8
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 1134.7
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 1134.1
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 1130.3
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 1124.9
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 1097.6
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 1097.6
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 1084.5
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 1083.1
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 1073.0
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 1071.2
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 1070.8
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 1070.0
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 1066.3
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 1055.0
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 1054.0
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 1052.4
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 1050.9
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 1050.6
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 1045.6
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 1045.6
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 1037.4
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 1030.0
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 1026.6
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 1017.4
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 1010.4
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 1008.2
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 1002.7
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 1002.0
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 999.5
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 999.1
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 995.3
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 994.4
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 994.0
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 985.7
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 984.5
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 984.5
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 983.1
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 982.5
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 981.2
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 978.4
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 974.4
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 972.9
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 968.0
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 965.8
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 965.6
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 963.6
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 958.9
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 956.8
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 955.7
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 954.7
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 954.6
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 954.1
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 949.3
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 945.6
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 944.2
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 942.3
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 936.3
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 928.0
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 926.3
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 921.7
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 919.5
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 917.5
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 917.4
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 916.4
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 912.2
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 907.4
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 902.2
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 898.3
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 897.7
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 894.5
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 892.2
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 891.8
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 884.0
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 881.2
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 879.6
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 879.2
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 872.8
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 867.8
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 867.0
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 866.8
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 862.3
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 856.7
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 855.5
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 850.0
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 838.2
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 834.2
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 832.5
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 832.1
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 826.9
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 820.8
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 816.5
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 811.4
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 809.3
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 807.9
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 803.7
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 803.6
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 792.1
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 788.9
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 787.9
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 786.1
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 785.5
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 783.8
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 783.5
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 782.7
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 782.1
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 771.0
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 769.1
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 746.4
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 742.9
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 742.0
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 726.2
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 725.8
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 721.3
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 716.1
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 714.5
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 705.3
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 703.8
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 703.1
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 701.7
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 699.9
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 696.4
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 682.2
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 677.4
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 667.1
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 646.3
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 643.7
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 638.9
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 626.3
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 623.9
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 617.2
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 615.1
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 496.7
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

335.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 217.5
FF:10164-103B2 76 years, female 217.5
Nucleus accumbens
Scaled Tags Per Million: 125.9
FF:10037-101F1 23-56 years, mixed 125.9
Putamen
Scaled Tags Per Million: 269.3
FF:10176-103C5 60 years, female 269.3
Globus pallidus
Scaled Tags Per Million: 335.5
FF:10175-103C4 60 years, female 433.9
FF:10161-103A8 76 years, female 237.0

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

449.4
Pig sample Sample description nTPM
Caudate
nTPM: 335.2
Samples: 4

Max nTPM: 357.8
Min nTPM: 298.7
Sample A Female 347.3
Sample B Female 357.8
Sample C Male 336.8
Sample D Male 298.7
Putamen
nTPM: 449.4
Samples: 4

Max nTPM: 567.9
Min nTPM: 353.3
Sample A Female 567.9
Sample B Female 353.3
Sample C Male 482.0
Sample D Male 394.2
Septum
nTPM: 423.6
Samples: 4

Max nTPM: 550.1
Min nTPM: 317.9
Sample A Female 550.1
Sample B Female 425.1
Sample C Male 401.2
Sample D Male 317.9
Ventral pallidum
nTPM: 376.5
Samples: 4

Max nTPM: 505.6
Min nTPM: 320.1
Sample A Female 320.1
Sample B Female 505.6
Sample C Male 331.0
Sample D Male 349.4

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

2006.5
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 1574.1
Samples: 4

Max nTPM: 1862.5
Min nTPM: 1322.0
Sample A Male 1609.6
Sample B Male 1862.5
Sample C Female 1322.0
Sample D Female 1502.4
Septum
nTPM: 2006.5
Samples: 4

Max nTPM: 2527.2
Min nTPM: 1623.2
Sample A Male 1623.2
Sample B Male 2527.2
Sample C Female 2241.5
Sample D Female 1634.2
Ventral forebrain
nTPM: 1587.8
Samples: 4

Max nTPM: 2262.5
Min nTPM: 1201.8
Sample A Male 1488.1
Sample B Male 1398.6
Sample C Female 2262.5
Sample D Female 1201.8

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

5.4
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 3.7
68545854 Antisense, RP_050120_01_F03, Mouse strain C57BL/6J (56 days, male) 3.7
74425523 Antisense, RP_051214_02_E09, Mouse strain C57BL/6J (56 days, male) 3.7
Pallidum
Expression energy: 5.4
68545854 Antisense, RP_050120_01_F03, Mouse strain C57BL/6J (56 days, male) 5.5
74425523 Antisense, RP_051214_02_E09, Mouse strain C57BL/6J (56 days, male) 5.3

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