PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:356.9 nTPM
FANTOM5:249.5 Scaled Tags Per Million
Pig:580.4 nTPM
Mouse:1308.6 nTPM
Allen mouse:4.4 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 356.9
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 321.0
2188 Female, age 91, both hemispheres 412.4
2090 Male, age 80, both hemispheres 350.5
1984 Male, age 76, both hemispheres 322.4
2301 Female, age 85, both hemispheres 198.8
Area postrema
nTPM: 223.6
2306 Male, age 80, both hemispheres 280.2
2799 Male, age 61, both hemispheres 259.3
2054 Male, age 76, both hemispheres 131.3
Dorsal cochlear nucleus
nTPM: 255.3
2187 Female, age 91, both hemispheres 302.0
2370 Male, age 61, both hemispheres 283.3
2802 Male, age 74, right hemisphere 247.7
2378 Male, age 80, both hemispheres 239.1
2058 Male, age 76, both hemispheres 204.6
Dorsal medullary reticular nucleus
nTPM: 253.0
2373 Male, age 61, both hemispheres 283.8
2040 Female, age 85, both hemispheres 271.2
2088 Male, age 76, both hemispheres 203.9
Dorsal motor vagal complex
nTPM: 240.9
2797 Male, age 61, both hemispheres 354.4
2133 Female, age 91, both hemispheres 270.4
2643 Male, age 74, both hemispheres 267.9
2844 Male, age 55, unknown 262.8
2000 Male, age 74, unknown 222.1
2807 Female, age 85, both hemispheres 220.6
2813 Female, age 72, unknown 169.5
2185 Male, age 76, both hemispheres 159.6
Dorsal tegmental nucleus
nTPM: 283.9
2326 Male, age 74, both hemispheres 368.4
2083 Male, age 80, both hemispheres 345.8
1936 Male, age 76, left hemisphere 232.0
2358 Male, age 61, both hemispheres 189.5
Dorsolateral tegmental area
nTPM: 304.3
2751 Female, age 85, both hemispheres 380.7
2654 Male, age 80, both hemispheres 339.1
2360 Male, age 74, both hemispheres 298.9
2337 Male, age 61, both hemispheres 298.4
2141 Male, age 76, both hemispheres 204.4
Gigantocellular reticular nuclei, medullary
nTPM: 277.2
2314 Male, age 61, both hemispheres 352.7
1876 Female, age 85, both hemispheres 313.6
2310 Male, age 80, both hemispheres 257.8
2387 Female, age 91, both hemispheres 256.4
2462 Male, age 74, both hemispheres 244.9
2022 Male, age 76, right hemisphere 237.6
Gigantocellular reticular nuclei, pars
nTPM: 235.8
2084 Female, age 85, both hemispheres 339.7
2336 Male, age 61, both hemispheres 241.0
2168 Male, age 76, both hemispheres 223.3
2330 Male, age 80, both hemispheres 192.5
2706 Male, age 80, both hemispheres 182.4
Inferior olive
nTPM: 271.1
2178 Male, age 61, both hemispheres 345.4
2085 Female, age 85, both hemispheres 300.7
2563 Male, age 74, both hemispheres 285.7
2379 Male, age 80, both hemispheres 236.9
2628 Female, age 91, both hemispheres 186.7
Kolliker-Fuse nucleus
nTPM: 288.5
2315 Male, age 76, right hemisphere 318.1
2793 Female, age 91, left hemisphere 285.6
2163 Male, age 80, both hemispheres 261.8
Lateral lemniscal nuclei
nTPM: 259.5
2453 Male, age 74, right hemisphere 278.1
2320 Female, age 91, left hemisphere 266.6
2169 Male, age 76, both hemispheres 258.0
2746 Female, age 85, left hemisphere 256.5
2036 Male, age 80, both hemispheres 238.3
Lateral medullary reticular nucleus
nTPM: 266.6
2190 Female, age 85, both hemispheres 322.0
2852 Male, age 80, both hemispheres 304.3
2804 Female, age 91, both hemispheres 272.7
2305 Male, age 74, both hemispheres 261.8
2374 Male, age 61, both hemispheres 230.0
2044 Male, age 76, both hemispheres 208.7
Lateral parabrachial nucleus
nTPM: 280.6
2013 Male, age 80, both hemispheres 335.3
2792 Male, age 76, both hemispheres 303.4
2139 Female, age 85, right hemisphere 244.9
2790 Male, age 61, both hemispheres 238.9
Lateral vestibular nucleus
nTPM: 237.9
2311 Male, age 80, both hemispheres 267.9
2184 Male, age 76, both hemispheres 208.0
Locus coeruleus
nTPM: 238.7
2123 Female, age 91, both hemispheres 269.6
2317 Female, age 72, unknown 258.9
2014 Male, age 55, unknown 258.2
2162 Male, age 80, both hemispheres 243.7
1980 Male, age 76, both hemispheres 230.4
2720 Male, age 74, both hemispheres 213.7
2788 Male, age 74, unknown 196.1
Medial olivary nucleus
nTPM: 343.9
1943 Male, age 61, both hemispheres 422.1
1962 Male, age 76, both hemispheres 363.9
2138 Female, age 91, both hemispheres 344.6
2851 Male, age 80, both hemispheres 245.0
Medial parabrachial nucleus
nTPM: 297.5
2463 Female, age 85, right hemisphere 382.8
2170 Female, age 91, both hemispheres 374.8
2156 Male, age 61, both hemispheres 269.6
2786 Male, age 76, both hemispheres 238.3
2854 Male, age 80, both hemispheres 221.9
Medial periolivary nuclei
nTPM: 253.3
2063 Male, age 76, both hemispheres 310.5
2081 Male, age 80, both hemispheres 272.9
2791 Male, age 74, right hemisphere 254.1
2458 Female, age 91, both hemispheres 237.7
2171 Female, age 85, both hemispheres 190.9
Medial vestibular nucleus
nTPM: 236.4
2743 Female, age 85, both hemispheres 284.5
2803 Female, age 91, both hemispheres 277.2
2093 Male, age 80, both hemispheres 273.7
2801 Male, age 74, both hemispheres 205.6
2134 Male, age 76, both hemispheres 197.0
2624 Male, age 61, both hemispheres 180.3
Motor facial nucleus
nTPM: 243.3
2126 Male, age 61, both hemispheres 316.8
2062 Male, age 76, both hemispheres 283.8
2365 Male, age 74, right hemisphere 265.7
2795 Female, age 91, both hemispheres 241.5
2327 Male, age 80, both hemispheres 177.9
2697 Female, age 85, both hemispheres 173.8
Motor hypoglossal nucleus
nTPM: 220.0
2132 Female, age 85, both hemispheres 313.9
2125 Female, age 91, both hemispheres 308.3
2182 Male, age 80, both hemispheres 206.2
2277 Male, age 76, both hemispheres 173.7
2461 Male, age 61, both hemispheres 97.6
Motor trigeminal nucleus
nTPM: 258.5
2309 Male, age 76, both hemispheres 286.3
2560 Male, age 74, both hemispheres 273.1
2335 Male, age 61, both hemispheres 253.1
2321 Female, age 91, both hemispheres 243.9
2079 Male, age 80, both hemispheres 235.9
Nuclei of the trapezoid body
nTPM: 254.1
1983 Male, age 76, both hemispheres 335.5
2159 Male, age 61, both hemispheres 251.7
2368 Female, age 91, both hemispheres 242.2
2166 Male, age 80, both hemispheres 240.1
2735 Female, age 85, both hemispheres 201.2
Nucleus ambiguus
nTPM: 238.2
2071 Male, age 76, both hemispheres 303.5
2096 Female, age 85, both hemispheres 172.8
Nucleus cuneatus
nTPM: 216.5
2376 Male, age 61, both hemispheres 281.0
2808 Female, age 85, both hemispheres 256.8
2564 Male, age 74, both hemispheres 234.6
2562 Male, age 61, both hemispheres 233.2
2380 Male, age 80, both hemispheres 219.3
2805 Female, age 91, both hemispheres 210.4
2381 Male, age 80, both hemispheres 202.6
2131 Male, age 76, both hemispheres 164.8
2100 Male, age 76, both hemispheres 146.0
Nucleus gracilis
nTPM: 209.3
2382 Male, age 80, both hemispheres 243.7
2299 Female, age 85, both hemispheres 214.5
2627 Male, age 74, both hemispheres 169.5
Nucleus raphe magnus
nTPM: 229.8
2455 Male, age 74, both hemispheres 275.6
2459 Female, age 91, both hemispheres 256.8
2160 Male, age 61, both hemispheres 251.7
2328 Male, age 80, both hemispheres 216.3
2051 Male, age 76, both hemispheres 195.3
2172 Female, age 85, both hemispheres 183.3
Nucleus raphe obscurus
nTPM: 315.4
2800 Male, age 61, midline 346.8
2845 Female, age 85, midline 323.8
2142 Male, age 76, midline 275.8
Nucleus raphe pallidus
nTPM: 327.2
1924 Male, age 61, midline 452.9
2183 Male, age 80, midline 290.7
2145 Male, age 76, midline 238.0
Nucleus tractus solitarii
nTPM: 216.8
2144 Female, age 91, right hemisphere 285.1
2191 Female, age 85, both hemispheres 246.1
2656 Male, age 76, both hemispheres 174.7
2307 Male, age 80, both hemispheres 161.4
Paramedian reticular nucleus
nTPM: 268.8
2057 Male, age 80, both hemispheres 301.5
2313 Male, age 61, both hemispheres 294.0
2050 Female, age 85, both hemispheres 244.9
2052 Male, age 76, both hemispheres 234.9
Parvicellular reticular nuclei
nTPM: 280.5
2119 Male, age 80, both hemispheres 311.4
2095 Male, age 76, both hemispheres 291.2
2558 Male, age 74, both hemispheres 238.9
Parvicellular reticular nuclei, medullary
nTPM: 265.7
2091 Female, age 85, both hemispheres 287.5
2189 Female, age 91, both hemispheres 278.8
2181 Male, age 80, left hemisphere 230.7
Pedunculopontine tegmental nucleus
nTPM: 284.0
2338 Male, age 61, both hemispheres 298.0
2334 Male, age 80, both hemispheres 290.5
1921 Female, age 85, both hemispheres 263.5
Peritrigeminal nucleus
nTPM: 301.4
2067 Female, age 85, both hemispheres 391.5
2136 Male, age 76, both hemispheres 275.3
2179 Male, age 61, both hemispheres 237.3
Pontine nuclei
nTPM: 304.5
2319 Female, age 91, both hemispheres 362.5
2454 Male, age 74, left hemisphere 349.2
1863 Male, age 55, unknown 323.5
1968 Male, age 76, left hemisphere 316.2
2727 Male, age 61, right hemisphere 300.7
2109 Female, age 72, unknown 277.5
2787 Female, age 85, both hemispheres 273.9
2115 Male, age 80, left hemisphere 232.5
Pontine raphe nucleus
nTPM: 258.4
2122 Female, age 85, midline 282.6
2853 Male, age 76, midline 234.2
Posteroventral cochlear nucleus
nTPM: 356.9
2135 Female, age 91, both hemispheres 504.7
2341 Male, age 80, both hemispheres 409.5
2371 Male, age 61, both hemispheres 314.4
2752 Female, age 85, both hemispheres 302.6
2070 Male, age 76, both hemispheres 253.2
Prepositus hypoglossal nucleus
nTPM: 276.3
2086 Male, age 80, both hemispheres 280.2
2855 Female, age 85, right hemisphere 272.3
Principal sensory trigeminal nucleus
nTPM: 227.4
2367 Female, age 91, left hemisphere 256.9
2158 Male, age 61, both hemispheres 249.7
2008 Male, age 80, left hemisphere 212.9
2324 Male, age 76, both hemispheres 190.1
Reticular pontine nucleus, caudal
nTPM: 276.4
2559 Male, age 74, both hemispheres 342.3
2092 Male, age 76, both hemispheres 319.2
2457 Female, age 91, both hemispheres 274.3
2332 Male, age 80, right hemisphere 169.9
Reticular pontine nucleus, oral
nTPM: 283.2
2366 Female, age 91, both hemispheres 322.5
1939 Male, age 80, both hemispheres 309.0
2167 Male, age 76, both hemispheres 289.0
2012 Female, age 85, both hemispheres 253.5
2361 Male, age 74, both hemispheres 241.8
Reticulotegmental nucleus
nTPM: 265.3
2452 Male, age 74, both hemispheres 362.4
2322 Female, age 91, both hemispheres 236.7
2333 Male, age 80, both hemispheres 233.0
2325 Male, age 76, both hemispheres 229.2
Spinal trigeminal nucleus, caudal
nTPM: 214.3
2308 Male, age 80, both hemispheres 245.5
2312 Male, age 61, both hemispheres 241.0
2390 Female, age 91, both hemispheres 208.9
2447 Male, age 76, both hemispheres 195.9
2642 Male, age 74, both hemispheres 180.3
Spinal trigeminal nucleus, interpolar
nTPM: 236.1
2066 Male, age 76, right hemisphere 309.7
2033 Male, age 80, both hemispheres 259.5
2386 Female, age 85, both hemispheres 234.8
2389 Female, age 91, both hemispheres 210.7
2625 Male, age 61, both hemispheres 166.0
Spinal trigeminal nucleus, oral
nTPM: 254.1
2737 Female, age 85, both hemispheres 289.4
1978 Male, age 76, both hemispheres 246.8
2164 Male, age 80, both hemispheres 226.0
Spinal vestibular nucleus
nTPM: 300.6
2384 Male, age 74, both hemispheres 384.0
2780 Male, age 80, both hemispheres 305.3
2806 Female, age 85, both hemispheres 302.9
2186 Female, age 91, both hemispheres 280.2
2748 Male, age 76, both hemispheres 276.0
2796 Male, age 61, both hemispheres 255.0
Subcoeruleus area
nTPM: 306.9
2451 Male, age 74, both hemispheres 426.1
2369 Female, age 85, left hemisphere 353.7
1958 Male, age 80, both hemispheres 262.1
2323 Female, age 91, left hemisphere 247.5
2089 Male, age 76, left hemisphere 245.0
Superior olive
nTPM: 253.7
2020 Male, age 76, both hemispheres 345.9
2364 Male, age 74, right hemisphere 274.6
1875 Female, age 85, both hemispheres 247.4
2561 Female, age 91, both hemispheres 209.6
2329 Male, age 80, right hemisphere 191.0
Superior vestibular nucleus
nTPM: 278.6
2015 Male, age 80, both hemispheres 317.0
2383 Male, age 74, both hemispheres 264.8
2061 Male, age 76, both hemispheres 253.9
Ventral medullary reticular nucleus
nTPM: 289.5
2372 Male, age 61, both hemispheres 338.3
2060 Male, age 76, both hemispheres 240.7
Ventral periolivary nuclei
nTPM: 261.9
2023 Male, age 76, both hemispheres 362.2
2165 Male, age 80, both hemispheres 265.9
2794 Female, age 91, left hemisphere 252.7
2130 Female, age 85, both hemispheres 166.9
Ventrolateral medulla, A1-C1 cell groups
nTPM: 318.8
2741 Female, age 85, both hemispheres 338.5
2118 Male, age 80, both hemispheres 328.8
2302 Female, age 91, both hemispheres 326.4
1986 Male, age 76, both hemispheres 307.0
2180 Male, age 61, both hemispheres 293.2
Ventrolateral tegmental area, A5 NE cell group
nTPM: 244.1
1959 Male, age 76, both hemispheres 267.8
2456 Female, age 91, both hemispheres 264.7
2161 Male, age 80, both hemispheres 259.6
2449 Male, age 74, both hemispheres 249.6
2359 Male, age 61, both hemispheres 237.7
2840 Female, age 85, both hemispheres 185.5

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 249.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 249.5
FF:10182-103D2 60 years, female 251.1
FF:10165-103B3 76 years, female 247.8
Medulla oblongata
Scaled Tags Per Million: 174.4
FF:10174-103C3 60 years, female 255.0
FF:10155-103A2 76 years, female 183.2
FF:10038-101F2 18-64 years, mixed 85.0
Pons
Scaled Tags Per Million: 90.9
FF:10033-101E6 18-54 years, mixed 90.9

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 580.4
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 515.3
Samples: 4

Max nTPM: 649.8
Min nTPM: 394.6
Sample A Female 402.5
Sample B Female 394.6
Sample C Male 614.2
Sample D Male 649.8
Pons
nTPM: 580.4
Samples: 4

Max nTPM: 742.4
Min nTPM: 438.8
Sample A Female 578.0
Sample B Female 438.8
Sample C Male 742.4
Sample D Male 562.2

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 1308.6
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 1308.6
Samples: 4

Max nTPM: 1468.2
Min nTPM: 1153.8
Sample A Male 1468.2
Sample B Male 1153.8
Sample C Female 1308.6
Sample D Female 1303.8

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 4.4
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 2.7
74425523 Antisense, RP_051214_02_E09, Mouse strain C57BL/6J (56 days, male) 4.7
68545854 Antisense, RP_050120_01_F03, Mouse strain C57BL/6J (56 days, male) 0.7
Pons
Expression energy: 4.4
74425523 Antisense, RP_051214_02_E09, Mouse strain C57BL/6J (56 days, male) 6.8
68545854 Antisense, RP_050120_01_F03, Mouse strain C57BL/6J (56 days, male) 2.1

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