HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni
Consensus:573.8 nTPM
HPA Brain:187.9 nTPM
GTEx:573.8 nTPM
FANTOM5:24.5 Scaled Tags Per Million
Pig:471.4 nTPM
Mouse:584.5 nTPM
Allen mouse:17.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA056586
Glial cells High
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 187.9
Sample id Sample description nTPM
Hippocampus
nTPM: 187.9
1898 Male, age 80, left hemisphere 212.7
2621 Female, age 67, right hemisphere 205.9
2529 Female, age 94, left hemisphere 188.7
1855 Male, age 76, left hemisphere 176.3
1911 Female, age 85, right hemisphere 172.5
2148 Female, age 91, left hemisphere 171.0
Dentate gyrus
nTPM: 181.8
2530 Female, age 94, left hemisphere 207.8
2010 Male, age 76, both hemispheres 184.7
2528 Male, age 74, both hemispheres 178.5
1927 Female, age 91, both hemispheres 178.4
2246 Female, age 85, both hemispheres 177.3
2531 Female, age 67, both hemispheres 163.9
Entorhinal gyrus
nTPM: 174.9
2686 Male, age 75, right hemisphere 184.2
2117 Female, age 91, right hemisphere 183.3
2764 Male, age 80, right hemisphere 180.9
1787 Male, age 76, left hemisphere 177.4
1938 Female, age 85, left hemisphere 177.4
2613 Female, age 94, left hemisphere 146.2
Hippocampus, CA1
nTPM: 181.6
2749 Male, age 80, left hemisphere 192.3
2082 Female, age 91, right hemisphere 186.6
2045 Male, age 76, both hemispheres 184.0
1873 Female, age 85, both hemispheres 177.5
2527 Male, age 74, both hemispheres 167.8
Hippocampus, CA2
nTPM: 180.7
1963 Male, age 80, left hemisphere 210.3
2113 Female, age 91, right hemisphere 181.7
2249 Male, age 74, both hemispheres 180.6
1892 Male, age 76, both hemispheres 178.1
2437 Female, age 94, left hemisphere 175.3
1940 Female, age 85, left hemisphere 158.2
Hippocampus, CA3
nTPM: 171.9
2436 Male, age 74, both hemispheres 198.3
1867 Male, age 76, both hemispheres 186.1
1891 Female, age 85, both hemispheres 179.7
2861 Female, age 67, both hemispheres 176.7
2137 Male, age 80, left hemisphere 161.8
2620 Female, age 94, left hemisphere 128.9
Parahippocampal cortex
nTPM: 173.8
2018 Male, age 76, both hemispheres 209.4
1850 Male, age 80, both hemispheres 191.7
2250 Female, age 67, right hemisphere 184.6
1933 Female, age 85, both hemispheres 180.9
1990 Female, age 91, right hemisphere 180.3
2245 Female, age 91, both hemispheres 178.7
2532 Female, age 72, left hemisphere 176.5
2692 Male, age 74, both hemispheres 152.0
2693 Female, age 94, both hemispheres 142.3
2622 Female, age 67, right hemisphere 141.9
Perirhinal gyrus
nTPM: 185.9
1841 Female, age 85, right hemisphere 205.6
1847 Female, age 91, left hemisphere 204.2
1794 Male, age 80, right hemisphere 185.2
2848 Male, age 76, right hemisphere 175.2
2521 Female, age 94, right hemisphere 159.2
Subiculum
nTPM: 173.5
1977 Female, age 85, both hemispheres 196.6
2042 Male, age 76, both hemispheres 180.6
2729 Female, age 91, right hemisphere 175.7
2438 Female, age 94, left hemisphere 167.7
2619 Male, age 74, both hemispheres 163.4
1901 Male, age 80, both hemispheres 156.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 573.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 573.8
Samples: 197

Max nTPM: 2031.0
Min nTPM: 291.8
Std nTPM: 181.2
Median nTPM: 532.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 2031.0
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 1129.1
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 1084.7
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 1013.6
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 989.2
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 949.4
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 935.2
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 904.7
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 903.5
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 901.7
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 901.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 24.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 24.5
FF:10169-103B7 60 years, female 30.1
FF:10153-102I9 76 years, female 19.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 471.4
Pig sample Sample description nTPM
Subiculum
nTPM: 414.4
Samples: 4

Max nTPM: 579.8
Min nTPM: 347.2
Sample A Female 579.8
Sample B Female 381.1
Sample C Male 349.4
Sample D Male 347.2
Dorsal hippocampus
nTPM: 471.4
Samples: 4

Max nTPM: 637.1
Min nTPM: 319.8
Sample A Female 637.1
Sample B Female 419.4
Sample C Male 509.1
Sample D Male 319.8
Entorhinal cortex
nTPM: 427.7
Samples: 4

Max nTPM: 537.5
Min nTPM: 312.1
Sample A Female 346.9
Sample B Female 537.5
Sample C Male 514.3
Sample D Male 312.1
Ventral hippocampus
nTPM: 437.0
Samples: 4

Max nTPM: 512.6
Min nTPM: 374.3
Sample A Female 454.6
Sample B Female 374.3
Sample C Male 512.6
Sample D Male 406.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 584.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 547.4
Samples: 4

Max nTPM: 595.5
Min nTPM: 513.9
Sample A Male 541.2
Sample B Male 539.0
Sample C Female 595.5
Sample D Female 513.9
Hippocampal formation
nTPM: 584.5
Samples: 4

Max nTPM: 669.0
Min nTPM: 538.3
Sample A Male 669.0
Sample B Male 538.3
Sample C Female 579.2
Sample D Female 551.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 17.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 17.7
68076526 Antisense, RP_040923_02_D09, Mouse strain C57BL/6J (56 days, male) 17.7

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