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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
PRIMARY MOUSE DATA
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:133.9 nTPM
HPA Brain:238.0 nTPM
GTEx:133.9 nTPM
FANTOM5:226.6 Scaled Tags Per Million
Pig:28.8 nTPM
Mouse:35.4 nTPM
Allen mouse:2.1 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA014404Antibody CAB001452Antibody CAB040581Antibody CAB080022
Glial cells Not detectedNot detectedLowLow
Neuronal cells Not detectedNot detectedMediumMedium









BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

238.0
Sample id Sample description nTPM
Caudate nucleus
nTPM: 98.6
2481 Female, age 94, left hemisphere 182.0
2288 Male, age 75, left hemisphere 152.0
1781 Male, age 74, unknown 134.4
2289 Male, age 61, right hemisphere 85.8
1857 Female, age 85, left hemisphere 77.6
2290 Female, age 72, unknown 57.6
2846 Female, age 79, unknown 53.8
1854 Male, age 80, left hemisphere 46.0
Globus pallidus, externus
nTPM: 127.8
2772 Female, age 79, unknown 245.8
2646 Male, age 61, right hemisphere 120.7
2567 Female, age 72, unknown 111.0
1996 Male, age 80, right hemisphere 100.2
2395 Male, age 75, both hemispheres 61.1
Globus pallidus, internus
nTPM: 124.6
1818 Male, age 74, unknown 274.1
2566 Female, age 72, unknown 160.0
2037 Male, age 80, right hemisphere 155.6
2483 Female, age 94, right hemisphere 115.9
2111 Female, age 85, right hemisphere 58.7
2287 Male, age 75, right hemisphere 58.3
2778 Female, age 91, both hemispheres 49.5
Nucleus accumbens
nTPM: 82.4
2286 Male, age 75, left hemisphere 149.8
2391 Female, age 94, left hemisphere 100.4
1856 Female, age 91, right hemisphere 80.3
2698 Female, age 72, unknown 79.3
2824 Male, age 61, right hemisphere 74.7
1806 Female, age 85, left hemisphere 68.9
1783 Male, age 74, unknown 55.4
2732 Male, age 80, right hemisphere 50.4
Nucleus basalis of Meynert
nTPM: 136.7
2821 Male, age 75, both hemispheres 257.9
2484 Female, age 94, left hemisphere 126.0
2569 Male, age 61, both hemispheres 111.0
2393 Male, age 80, right hemisphere 51.8
Nucleus of the diagonal band
nTPM: 235.0
2775 Male, age 80, right hemisphere 281.5
1812 Female, age 91, both hemispheres 272.6
2029 Male, age 61, right hemisphere 258.2
2195 Female, age 85, both hemispheres 233.9
1979 Male, age 74, unknown 128.7
Putamen
nTPM: 72.2
2482 Female, age 94, left hemisphere 143.4
2647 Male, age 75, left hemisphere 102.8
1937 Female, age 91, right hemisphere 82.1
1829 Male, age 74, unknown 60.8
2466 Female, age 79, unknown 45.4
1838 Male, age 80, right hemisphere 39.9
2489 Female, age 72, unknown 30.9
Septal nuclei
nTPM: 178.3
2394 Male, age 61, left hemisphere 232.3
1960 Male, age 74, unknown 216.4
2629 Female, age 94, right hemisphere 214.7
2009 Female, age 91, both hemispheres 202.7
2059 Female, age 85, both hemispheres 165.2
2031 Female, age 72, unknown 134.1
2199 Male, age 80, right hemisphere 82.4
Stria terminalis, bed nucleus
nTPM: 238.0
1974 Female, age 91, both hemispheres 316.9
2201 Male, age 74, unknown 229.9
2486 Female, age 94, both hemispheres 167.0

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

133.9
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 128.5
Samples: 246

Max nTPM: 414.3
Min nTPM: 24.5
Std nTPM: 66.0
Median nTPM: 115.3
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 414.3
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 392.4
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 362.1
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 348.1
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 316.1
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 313.0
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 312.6
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 310.6
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 300.0
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 289.5
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 288.9
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 278.8
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 266.7
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 265.2
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 246.3
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 238.6
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 234.4
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 226.4
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 225.1
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 218.8
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 214.5
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 213.4
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 211.9
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 211.6
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 210.2
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 207.8
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 204.9
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 201.8
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 199.6
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 199.5
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 198.2
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 195.8
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 193.9
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 193.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 193.4
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 193.4
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 192.6
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 189.9
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 184.0
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 182.5
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 180.5
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 177.6
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 176.9
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 176.9
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 176.7
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 175.6
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 174.7
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 171.3
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 171.1
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 167.4
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 167.2
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 165.7
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 165.0
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 164.5
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 163.8
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 159.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 158.7
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 158.7
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 158.5
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 157.8
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 155.2
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 153.8
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 153.1
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 152.7
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 152.7
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 150.7
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 150.1
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 150.1
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 150.0
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 149.6
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 148.7
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 146.9
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 146.6
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 146.5
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 145.5
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 145.4
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 144.2
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 143.3
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 143.1
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 142.4
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 141.2
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 140.4
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 137.7
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 137.3
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 135.8
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 135.0
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 135.0
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 134.9
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 134.8
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 134.5
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 134.5
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 133.0
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 132.8
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 131.7
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 131.0
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 130.3
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 128.9
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 128.5
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 126.7
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 126.4
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 125.3
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 124.4
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 123.9
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 123.8
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 123.7
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 123.2
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 123.0
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 122.8
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 122.1
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 121.2
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 121.1
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 120.6
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 119.9
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 119.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 119.5
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 119.5
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 119.3
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 119.3
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 118.0
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 116.4
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 116.0
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 115.7
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 115.3
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 115.2
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 115.2
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 113.7
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 113.5
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 111.9
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 111.8
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 111.5
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 111.2
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 111.2
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 109.9
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 108.9
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 108.4
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 108.2
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 107.9
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 107.6
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 107.5
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 105.6
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 105.4
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 105.3
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 104.4
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 103.8
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 102.8
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 102.3
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 102.2
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 101.3
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 100.6
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 100.3
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 100.0
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 99.6
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 99.6
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 99.5
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 97.6
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 97.6
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 97.4
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 96.7
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 96.7
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 95.7
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 95.3
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 94.7
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 94.3
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 94.1
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 93.2
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 93.1
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 92.4
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 91.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 91.7
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 91.4
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 91.4
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 91.1
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 90.3
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 90.1
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 89.7
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 89.3
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 89.2
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 89.0
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 88.2
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 88.0
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 87.3
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 87.3
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 87.2
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 87.2
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 87.0
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 86.7
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 86.5
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 85.9
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 85.5
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 84.8
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 82.7
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 82.3
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 81.9
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 80.0
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 79.9
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 79.5
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 77.7
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 77.5
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 76.9
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 76.3
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 74.9
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 74.7
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 73.7
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 73.0
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 72.0
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 71.9
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 71.0
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 69.5
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 68.1
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 67.7
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 67.5
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 67.1
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 66.2
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 65.9
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 65.3
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 63.7
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 63.5
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 62.4
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 59.9
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 59.4
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 58.9
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 57.9
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 57.3
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 56.9
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 56.5
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 55.3
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 53.5
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 53.5
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 52.6
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 51.8
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 51.7
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 51.6
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 51.1
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 50.3
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 49.7
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 47.7
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 46.3
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 45.7
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 44.0
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 43.8
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 43.2
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 41.1
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 40.7
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 40.4
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 38.6
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 24.5
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 130.5
Samples: 246

Max nTPM: 1420.5
Min nTPM: 21.3
Std nTPM: 131.8
Median nTPM: 96.8
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 1420.5
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 963.4
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 606.6
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 572.6
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 570.4
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 400.9
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 389.6
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 368.8
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 354.0
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 336.6
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 335.8
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 309.0
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 293.3
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 292.6
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 287.7
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 273.4
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 268.8
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 256.9
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 245.4
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 240.5
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 239.8
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 237.3
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 236.3
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 231.9
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 231.5
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 226.8
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 221.5
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 220.2
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 216.3
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 215.0
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 214.5
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 213.8
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 213.4
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 211.8
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 208.3
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 206.7
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 204.3
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 202.6
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 200.7
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 196.0
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 195.2
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 193.1
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 191.6
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 188.4
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 179.9
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 175.6
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 175.5
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 171.6
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 169.5
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 168.6
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 166.5
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 166.0
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 164.2
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 161.8
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 157.6
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 156.0
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 155.0
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 152.6
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 150.3
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 148.2
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 147.9
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 144.6
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 143.8
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 143.3
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 143.2
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 142.2
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 141.8
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 140.1
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 139.3
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 138.7
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 137.1
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 137.1
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 137.0
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 136.2
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 136.0
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 135.6
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 134.6
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 133.2
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 131.8
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 131.1
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 129.7
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 129.6
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 129.5
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 128.9
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 128.3
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 127.6
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 127.4
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 124.3
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 122.0
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 121.8
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 120.8
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 120.0
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 118.5
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 118.0
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 117.6
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 117.0
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 114.5
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 112.8
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 112.5
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 111.9
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 111.4
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 110.9
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 110.3
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 110.3
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 109.1
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 108.8
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 108.3
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 106.9
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 106.7
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 105.9
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 105.7
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 103.1
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 102.6
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 102.1
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 102.0
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 101.8
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 101.0
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 99.9
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 98.3
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 98.1
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 98.0
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 97.7
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 97.2
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 96.4
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 94.2
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 94.1
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 93.7
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 93.2
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 92.4
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 91.7
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 91.6
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 91.2
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 91.2
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 91.1
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 91.1
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 89.9
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 89.6
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 88.7
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 88.2
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 87.5
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 87.3
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 86.5
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 86.4
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 86.4
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 86.3
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 86.1
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 86.1
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 85.1
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 84.4
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 83.7
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 83.3
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 83.1
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 83.0
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 82.5
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 81.5
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 81.3
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 81.1
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 80.6
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 79.6
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 78.3
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 75.9
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 75.6
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 75.4
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 75.2
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 74.7
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 74.7
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 72.2
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 70.3
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 69.6
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 69.6
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 69.4
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 69.0
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 68.7
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 68.6
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 68.3
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 67.1
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 67.1
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 67.0
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 66.6
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 66.1
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 65.9
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 65.7
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 65.3
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 64.7
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 64.6
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 63.5
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 63.0
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 62.3
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 62.3
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 62.3
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 62.2
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 61.7
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 61.6
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 61.3
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 60.4
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 59.9
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 59.8
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 59.7
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 59.3
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 59.2
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 58.6
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 58.3
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 58.1
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 58.0
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 57.8
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 56.6
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 56.1
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 55.9
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 55.5
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 55.3
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 54.3
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 53.9
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 53.6
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 53.4
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 51.7
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 51.3
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 51.2
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 50.8
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 50.7
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 50.3
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 47.4
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 46.5
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 45.1
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 45.0
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 45.0
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 44.9
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 44.8
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 44.5
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 43.7
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 43.5
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 43.4
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 41.4
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 41.3
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 41.2
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 40.1
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 40.1
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 37.6
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 37.2
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 34.6
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 33.9
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 31.8
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 29.8
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 28.6
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 23.7
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 23.0
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 21.3
Show allShow less
Brain - Putamen (basal ganglia)
Average nTPM: 133.9
Samples: 205

Max nTPM: 568.0
Min nTPM: 38.2
Std nTPM: 61.4
Median nTPM: 123.7
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 568.0
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 323.1
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 314.4
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 293.7
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 287.6
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 273.6
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 246.1
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 243.3
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 234.4
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 231.5
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 228.7
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 228.0
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 226.2
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 222.4
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 215.5
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 214.9
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 210.4
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 209.1
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 208.8
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 207.0
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 206.1
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 203.3
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 199.6
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 197.9
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 195.6
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 195.2
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 194.2
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 192.2
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 191.8
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 191.0
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 189.1
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 188.5
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 188.4
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 188.3
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 187.8
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 181.8
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 181.2
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 180.7
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 179.5
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 177.9
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 177.8
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 177.6
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 176.6
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 175.9
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 173.9
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 173.9
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 173.0
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 170.1
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 169.4
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 168.1
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 166.9
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 163.8
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 163.1
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 162.3
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 160.7
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 160.1
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 158.4
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 158.2
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 156.9
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 156.1
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 155.1
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 152.5
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 152.2
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 151.8
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 150.7
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 150.1
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 150.1
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 149.1
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 146.9
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 146.3
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 144.5
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 141.8
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 141.5
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 141.2
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 140.2
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 139.6
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 138.8
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 138.0
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 137.9
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 136.7
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 135.8
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 135.6
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 135.3
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 134.6
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 134.5
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 134.5
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 132.9
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 131.8
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 131.6
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 130.4
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 130.3
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 129.7
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 129.3
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 129.1
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 128.3
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 128.2
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 126.2
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 126.1
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 125.1
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 125.1
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 124.4
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 123.8
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 123.7
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 123.3
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 123.2
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 122.3
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 122.0
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 121.8
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 121.4
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 121.2
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 121.1
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 121.0
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 121.0
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 119.3
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 118.2
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 117.0
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 116.5
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 115.7
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 115.6
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 115.6
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 115.2
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 115.2
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 113.5
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 112.2
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 112.1
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 112.1
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 111.6
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 111.4
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 108.0
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 107.6
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 107.4
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 107.2
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 105.7
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 104.6
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 103.3
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 102.9
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 102.7
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 101.9
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 100.8
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 99.8
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 99.6
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 99.5
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 98.6
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 97.5
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 97.2
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 97.1
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 96.9
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 95.8
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 94.9
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 94.7
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 94.1
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 92.9
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 92.2
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 91.9
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 91.8
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 91.8
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 91.4
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 90.9
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 90.8
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 90.5
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 89.9
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 89.5
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 87.3
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 86.0
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 85.3
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 84.7
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 83.4
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 82.7
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 82.6
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 82.2
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 81.0
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 80.6
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 80.5
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 79.4
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 77.7
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 76.2
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 75.9
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 74.9
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 73.5
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 73.2
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 72.9
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 72.5
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 72.1
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 71.1
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 70.8
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 70.6
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 69.3
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 67.2
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 64.9
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 64.6
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 64.4
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 63.9
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 61.6
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 60.9
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 58.4
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 57.8
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 57.2
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 57.0
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 54.0
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 52.9
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 51.3
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 47.2
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 46.9
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 44.0
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 38.2
Show allShow less

BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

226.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 81.1
FF:10164-103B2 76 years, female 81.1
Nucleus accumbens
Scaled Tags Per Million: 176.8
FF:10037-101F1 23-56 years, mixed 176.8
Putamen
Scaled Tags Per Million: 104.1
FF:10176-103C5 60 years, female 104.1
Globus pallidus
Scaled Tags Per Million: 226.6
FF:10175-103C4 60 years, female 368.0
FF:10161-103A8 76 years, female 85.2

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

28.8
Pig sample Sample description nTPM
Caudate
nTPM: 5.5
Samples: 4

Max nTPM: 7.1
Min nTPM: 4.2
Sample A Female 5.8
Sample B Female 7.1
Sample C Male 4.7
Sample D Male 4.2
Putamen
nTPM: 10.1
Samples: 4

Max nTPM: 16.2
Min nTPM: 4.6
Sample A Female 16.2
Sample B Female 4.6
Sample C Male 11.0
Sample D Male 8.7
Septum
nTPM: 28.8
Samples: 4

Max nTPM: 86.9
Min nTPM: 5.9
Sample A Female 11.5
Sample B Female 10.8
Sample C Male 86.9
Sample D Male 5.9
Ventral pallidum
nTPM: 20.3
Samples: 4

Max nTPM: 64.3
Min nTPM: 4.5
Sample A Female 4.5
Sample B Female 6.9
Sample C Male 64.3
Sample D Male 5.6

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

35.4
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 7.2
Samples: 4

Max nTPM: 8.6
Min nTPM: 4.7
Sample A Male 8.3
Sample B Male 8.6
Sample C Female 4.7
Sample D Female 7.0
Septum
nTPM: 35.5
Samples: 4

Max nTPM: 38.4
Min nTPM: 32.7
Sample A Male 32.7
Sample B Male 33.3
Sample C Female 38.4
Sample D Female 37.4
Ventral forebrain
nTPM: 15.3
Samples: 4

Max nTPM: 25.7
Min nTPM: 9.1
Sample A Male 9.1
Sample B Male 25.7
Sample C Female 14.3
Sample D Female 12.0

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

2.1
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 1.1
68545693 Antisense, RP_050120_01_D05, Mouse strain C57BL/6J (56 days, male) 1.7
72081426 Antisense, RP_051017_01_C05, Mouse strain C57BL/6J (56 days, male) 0.6
Pallidum
Expression energy: 2.1
72081426 Antisense, RP_051017_01_C05, Mouse strain C57BL/6J (56 days, male) 2.2
68545693 Antisense, RP_050120_01_D05, Mouse strain C57BL/6J (56 days, male) 2.1

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