PONS AND MEDULLA - Expression summary
Mouse brain, Intensity
Medulla oblongatai 		112.735
Mouse brain, Intensity
Ponsi 		210.375
RNA expressioni
HPA Brain:794.2 nTPM
FANTOM5:983.5 Scaled Tags Per Million
Pig:52.5 nTPM
Mouse:280.0 nTPM
Allen mouse:7.2 Expression energy

MEDULLA OBLONGATA - Mouse brain profilei , antibody HPA014404
Medulla oblongata mean intensity 112.735
intensityi
FRONT BACK
Nucleus of the solitary tract 45.500
Raphe magnus nucleus 77.456
Cochlear nucleus 17.890
Lateral paragigantocellular nucleus 44.053
Raphe pallidus nucleus 101.221
Facial nucleus 93.842
Hypoglossal nucleus -
Ambiguus nucleus 62.369
External cuneate nucleus 18.851
Inferior olivary nucleus 5.941
Raphe obscures nucleus 68.339
Dorsal motor nucleus of vagus -
Barrington's nucleus -
Koelliker-fuse nucleus -
Motor tregiminal nucleus 72.339
Parabrachial nucleus 108.137
Principle sensory trigeminal nucleus 51.617
Locus coeruleus 201.689
Pontine nucleus 12.174
Vestibular nucleus 44.805
Pontine reticular nucleus, oral 14.300
Lateral lemniscus 50.044
Superior paraolivary nucleus 13.813

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 794.2
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 305.9
2301 Female, age 85, both hemispheres 333.1
1984 Male, age 76, both hemispheres 321.7
2188 Female, age 91, both hemispheres 305.7
2090 Male, age 80, both hemispheres 262.9
Area postrema
nTPM: 150.8
2054 Male, age 76, both hemispheres 312.0
2306 Male, age 80, both hemispheres 102.9
2799 Male, age 61, both hemispheres 37.6
Dorsal cochlear nucleus
nTPM: 323.4
2058 Male, age 76, both hemispheres 393.2
2187 Female, age 91, both hemispheres 362.2
2370 Male, age 61, both hemispheres 332.2
2802 Male, age 74, right hemisphere 293.0
2378 Male, age 80, both hemispheres 236.2
Dorsal medullary reticular nucleus
nTPM: 482.6
2040 Female, age 85, both hemispheres 655.0
2373 Male, age 61, both hemispheres 417.1
2088 Male, age 76, both hemispheres 375.6
Dorsal motor vagal complex
nTPM: 445.9
2133 Female, age 91, both hemispheres 894.3
2000 Male, age 74, unknown 560.9
2813 Female, age 72, unknown 551.5
2844 Male, age 55, unknown 493.9
2643 Male, age 74, both hemispheres 330.6
2807 Female, age 85, both hemispheres 254.1
2185 Male, age 76, both hemispheres 242.2
2797 Male, age 61, both hemispheres 239.5
Dorsal tegmental nucleus
nTPM: 333.1
2083 Male, age 80, both hemispheres 466.6
2358 Male, age 61, both hemispheres 317.5
1936 Male, age 76, left hemisphere 307.7
2326 Male, age 74, both hemispheres 240.6
Dorsolateral tegmental area
nTPM: 299.9
2654 Male, age 80, both hemispheres 427.9
2141 Male, age 76, both hemispheres 360.3
2751 Female, age 85, both hemispheres 341.2
2360 Male, age 74, both hemispheres 237.8
2337 Male, age 61, both hemispheres 132.1
Gigantocellular reticular nuclei, medullary
nTPM: 423.9
2462 Male, age 74, both hemispheres 798.7
2310 Male, age 80, both hemispheres 450.3
1876 Female, age 85, both hemispheres 419.5
2022 Male, age 76, right hemisphere 382.7
2387 Female, age 91, both hemispheres 293.7
2314 Male, age 61, both hemispheres 198.3
Gigantocellular reticular nuclei, pars
nTPM: 514.7
2168 Male, age 76, both hemispheres 688.4
2084 Female, age 85, both hemispheres 582.5
2336 Male, age 61, both hemispheres 507.5
2706 Male, age 80, both hemispheres 398.3
2330 Male, age 80, both hemispheres 397.1
Inferior olive
nTPM: 149.4
2628 Female, age 91, both hemispheres 260.4
2085 Female, age 85, both hemispheres 188.7
2563 Male, age 74, both hemispheres 116.9
2178 Male, age 61, both hemispheres 93.2
2379 Male, age 80, both hemispheres 87.6
Kolliker-Fuse nucleus
nTPM: 470.5
2163 Male, age 80, both hemispheres 719.2
2793 Female, age 91, left hemisphere 461.4
2315 Male, age 76, right hemisphere 230.7
Lateral lemniscal nuclei
nTPM: 546.2
2169 Male, age 76, both hemispheres 760.7
2453 Male, age 74, right hemisphere 712.5
2746 Female, age 85, left hemisphere 516.7
2036 Male, age 80, both hemispheres 407.6
2320 Female, age 91, left hemisphere 333.8
Lateral medullary reticular nucleus
nTPM: 323.1
2044 Male, age 76, both hemispheres 663.4
2804 Female, age 91, both hemispheres 299.4
2190 Female, age 85, both hemispheres 286.0
2852 Male, age 80, both hemispheres 257.6
2374 Male, age 61, both hemispheres 249.3
2305 Male, age 74, both hemispheres 183.2
Lateral parabrachial nucleus
nTPM: 362.0
2139 Female, age 85, right hemisphere 577.7
2013 Male, age 80, both hemispheres 365.8
2790 Male, age 61, both hemispheres 336.0
2792 Male, age 76, both hemispheres 168.4
Lateral vestibular nucleus
nTPM: 494.6
2184 Male, age 76, both hemispheres 626.4
2311 Male, age 80, both hemispheres 362.9
Locus coeruleus
nTPM: 689.7
2720 Male, age 74, both hemispheres 1189.5
2123 Female, age 91, both hemispheres 1091.9
2014 Male, age 55, unknown 558.0
1980 Male, age 76, both hemispheres 541.4
2317 Female, age 72, unknown 510.1
2162 Male, age 80, both hemispheres 509.8
2788 Male, age 74, unknown 427.5
Medial olivary nucleus
nTPM: 137.8
2851 Male, age 80, both hemispheres 278.8
1962 Male, age 76, both hemispheres 156.7
2138 Female, age 91, both hemispheres 66.6
1943 Male, age 61, both hemispheres 49.2
Medial parabrachial nucleus
nTPM: 415.7
2854 Male, age 80, both hemispheres 555.7
2156 Male, age 61, both hemispheres 472.4
2170 Female, age 91, both hemispheres 416.6
2786 Male, age 76, both hemispheres 368.3
2463 Female, age 85, right hemisphere 265.5
Medial periolivary nuclei
nTPM: 506.8
2171 Female, age 85, both hemispheres 832.8
2063 Male, age 76, both hemispheres 665.4
2791 Male, age 74, right hemisphere 435.5
2458 Female, age 91, both hemispheres 322.1
2081 Male, age 80, both hemispheres 278.0
Medial vestibular nucleus
nTPM: 650.3
2624 Male, age 61, both hemispheres 800.4
2134 Male, age 76, both hemispheres 739.3
2801 Male, age 74, both hemispheres 678.1
2803 Female, age 91, both hemispheres 635.5
2093 Male, age 80, both hemispheres 575.8
2743 Female, age 85, both hemispheres 472.8
Motor facial nucleus
nTPM: 581.1
2062 Male, age 76, both hemispheres 792.3
2365 Male, age 74, right hemisphere 690.8
2697 Female, age 85, both hemispheres 654.7
2327 Male, age 80, both hemispheres 597.9
2126 Male, age 61, both hemispheres 377.8
2795 Female, age 91, both hemispheres 373.0
Motor hypoglossal nucleus
nTPM: 613.4
2461 Male, age 61, both hemispheres 848.3
2125 Female, age 91, both hemispheres 703.0
2132 Female, age 85, both hemispheres 693.9
2182 Male, age 80, both hemispheres 491.1
2277 Male, age 76, both hemispheres 330.6
Motor trigeminal nucleus
nTPM: 455.3
2079 Male, age 80, both hemispheres 601.7
2560 Male, age 74, both hemispheres 457.9
2309 Male, age 76, both hemispheres 452.4
2335 Male, age 61, both hemispheres 449.8
2321 Female, age 91, both hemispheres 314.8
Nuclei of the trapezoid body
nTPM: 642.2
2159 Male, age 61, both hemispheres 934.1
2735 Female, age 85, both hemispheres 748.7
1983 Male, age 76, both hemispheres 716.8
2166 Male, age 80, both hemispheres 484.9
2368 Female, age 91, both hemispheres 326.6
Nucleus ambiguus
nTPM: 564.3
2096 Female, age 85, both hemispheres 986.5
2071 Male, age 76, both hemispheres 142.1
Nucleus cuneatus
nTPM: 312.7
2131 Male, age 76, both hemispheres 568.6
2100 Male, age 76, both hemispheres 435.6
2562 Male, age 61, both hemispheres 403.2
2564 Male, age 74, both hemispheres 337.9
2376 Male, age 61, both hemispheres 306.8
2381 Male, age 80, both hemispheres 265.9
2805 Female, age 91, both hemispheres 207.2
2808 Female, age 85, both hemispheres 172.7
2380 Male, age 80, both hemispheres 116.5
Nucleus gracilis
nTPM: 140.1
2627 Male, age 74, both hemispheres 191.8
2382 Male, age 80, both hemispheres 114.9
2299 Female, age 85, both hemispheres 113.8
Nucleus raphe magnus
nTPM: 729.8
2160 Male, age 61, both hemispheres 1048.5
2172 Female, age 85, both hemispheres 961.4
2455 Male, age 74, both hemispheres 927.4
2328 Male, age 80, both hemispheres 554.6
2051 Male, age 76, both hemispheres 526.7
2459 Female, age 91, both hemispheres 360.4
Nucleus raphe obscurus
nTPM: 220.1
2800 Male, age 61, midline 333.7
2845 Female, age 85, midline 270.6
2142 Male, age 76, midline 55.9
Nucleus raphe pallidus
nTPM: 268.7
2183 Male, age 80, midline 516.3
1924 Male, age 61, midline 245.3
2145 Male, age 76, midline 44.5
Nucleus tractus solitarii
nTPM: 378.6
2656 Male, age 76, both hemispheres 449.4
2307 Male, age 80, both hemispheres 408.8
2144 Female, age 91, right hemisphere 345.9
2191 Female, age 85, both hemispheres 310.5
Paramedian reticular nucleus
nTPM: 580.2
2313 Male, age 61, both hemispheres 711.5
2050 Female, age 85, both hemispheres 653.1
2057 Male, age 80, both hemispheres 645.0
2052 Male, age 76, both hemispheres 311.2
Parvicellular reticular nuclei
nTPM: 524.9
2558 Male, age 74, both hemispheres 602.3
2119 Male, age 80, both hemispheres 520.7
2095 Male, age 76, both hemispheres 451.8
Parvicellular reticular nuclei, medullary
nTPM: 558.5
2189 Female, age 91, both hemispheres 661.2
2091 Female, age 85, both hemispheres 552.2
2181 Male, age 80, left hemisphere 462.1
Pedunculopontine tegmental nucleus
nTPM: 400.6
2334 Male, age 80, both hemispheres 493.1
1921 Female, age 85, both hemispheres 398.9
2338 Male, age 61, both hemispheres 309.9
Peritrigeminal nucleus
nTPM: 510.3
2179 Male, age 61, both hemispheres 537.4
2136 Male, age 76, both hemispheres 516.6
2067 Female, age 85, both hemispheres 476.9
Pontine nuclei
nTPM: 570.9
2787 Female, age 85, both hemispheres 986.8
2727 Male, age 61, right hemisphere 826.7
1968 Male, age 76, left hemisphere 636.7
1863 Male, age 55, unknown 552.1
2109 Female, age 72, unknown 497.2
2454 Male, age 74, left hemisphere 404.9
2115 Male, age 80, left hemisphere 386.1
2319 Female, age 91, both hemispheres 276.7
Pontine raphe nucleus
nTPM: 583.7
2122 Female, age 85, midline 644.8
2853 Male, age 76, midline 522.7
Posteroventral cochlear nucleus
nTPM: 305.9
2752 Female, age 85, both hemispheres 526.7
2070 Male, age 76, both hemispheres 487.2
2371 Male, age 61, both hemispheres 264.0
2341 Male, age 80, both hemispheres 146.6
2135 Female, age 91, both hemispheres 105.1
Prepositus hypoglossal nucleus
nTPM: 476.2
2855 Female, age 85, right hemisphere 528.4
2086 Male, age 80, both hemispheres 424.0
Principal sensory trigeminal nucleus
nTPM: 606.0
2158 Male, age 61, both hemispheres 931.9
2008 Male, age 80, left hemisphere 589.4
2324 Male, age 76, both hemispheres 563.8
2367 Female, age 91, left hemisphere 339.0
Reticular pontine nucleus, caudal
nTPM: 457.5
2332 Male, age 80, right hemisphere 629.1
2092 Male, age 76, both hemispheres 528.0
2457 Female, age 91, both hemispheres 345.0
2559 Male, age 74, both hemispheres 327.8
Reticular pontine nucleus, oral
nTPM: 435.7
2361 Male, age 74, both hemispheres 521.2
2012 Female, age 85, both hemispheres 499.4
1939 Male, age 80, both hemispheres 453.4
2167 Male, age 76, both hemispheres 404.0
2366 Female, age 91, both hemispheres 300.3
Reticulotegmental nucleus
nTPM: 472.2
2325 Male, age 76, both hemispheres 580.4
2452 Male, age 74, both hemispheres 438.6
2322 Female, age 91, both hemispheres 436.7
2333 Male, age 80, both hemispheres 433.2
Spinal trigeminal nucleus, caudal
nTPM: 562.6
2390 Female, age 91, both hemispheres 1017.8
2447 Male, age 76, both hemispheres 602.6
2642 Male, age 74, both hemispheres 485.5
2308 Male, age 80, both hemispheres 396.5
2312 Male, age 61, both hemispheres 310.9
Spinal trigeminal nucleus, interpolar
nTPM: 794.2
2625 Male, age 61, both hemispheres 1440.4
2066 Male, age 76, right hemisphere 884.8
2389 Female, age 91, both hemispheres 594.8
2033 Male, age 80, both hemispheres 566.4
2386 Female, age 85, both hemispheres 484.5
Spinal trigeminal nucleus, oral
nTPM: 487.1
2164 Male, age 80, both hemispheres 607.9
2737 Female, age 85, both hemispheres 497.5
1978 Male, age 76, both hemispheres 355.8
Spinal vestibular nucleus
nTPM: 506.5
2796 Male, age 61, both hemispheres 608.1
2186 Female, age 91, both hemispheres 592.2
2780 Male, age 80, both hemispheres 589.3
2748 Male, age 76, both hemispheres 489.7
2806 Female, age 85, both hemispheres 447.1
2384 Male, age 74, both hemispheres 312.7
Subcoeruleus area
nTPM: 481.8
2323 Female, age 91, left hemisphere 736.7
1958 Male, age 80, both hemispheres 585.5
2089 Male, age 76, left hemisphere 439.6
2451 Male, age 74, both hemispheres 400.3
2369 Female, age 85, left hemisphere 246.7
Superior olive
nTPM: 497.9
1875 Female, age 85, both hemispheres 652.9
2020 Male, age 76, both hemispheres 475.0
2329 Male, age 80, right hemisphere 468.9
2364 Male, age 74, right hemisphere 467.3
2561 Female, age 91, both hemispheres 425.5
Superior vestibular nucleus
nTPM: 335.8
2015 Male, age 80, both hemispheres 443.0
2061 Male, age 76, both hemispheres 363.3
2383 Male, age 74, both hemispheres 201.0
Ventral medullary reticular nucleus
nTPM: 379.8
2060 Male, age 76, both hemispheres 539.6
2372 Male, age 61, both hemispheres 220.0
Ventral periolivary nuclei
nTPM: 595.9
2165 Male, age 80, both hemispheres 753.7
2130 Female, age 85, both hemispheres 751.4
2794 Female, age 91, left hemisphere 491.4
2023 Male, age 76, both hemispheres 387.2
Ventrolateral medulla, A1-C1 cell groups
nTPM: 406.9
1986 Male, age 76, both hemispheres 543.9
2741 Female, age 85, both hemispheres 542.9
2180 Male, age 61, both hemispheres 394.9
2302 Female, age 91, both hemispheres 321.6
2118 Male, age 80, both hemispheres 231.0
Ventrolateral tegmental area, A5 NE cell group
nTPM: 476.9
2449 Male, age 74, both hemispheres 745.2
2840 Female, age 85, both hemispheres 565.5
1959 Male, age 76, both hemispheres 533.3
2161 Male, age 80, both hemispheres 406.6
2359 Male, age 61, both hemispheres 375.4
2456 Female, age 91, both hemispheres 235.1

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 983.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 983.5
FF:10182-103D2 60 years, female 1452.8
FF:10165-103B3 76 years, female 514.1
Medulla oblongata
Scaled Tags Per Million: 409.1
FF:10038-101F2 18-64 years, mixed 534.3
FF:10174-103C3 60 years, female 457.6
FF:10155-103A2 76 years, female 235.4
Pons
Scaled Tags Per Million: 884.7
FF:10033-101E6 18-54 years, mixed 884.7

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 52.5
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 45.0
Samples: 4

Max nTPM: 63.8
Min nTPM: 30.9
Sample A Female 32.9
Sample B Female 52.2
Sample C Male 63.8
Sample D Male 30.9
Pons
nTPM: 52.5
Samples: 4

Max nTPM: 88.7
Min nTPM: 14.9
Sample A Female 14.9
Sample B Female 48.4
Sample C Male 88.7
Sample D Male 57.9

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 280.0
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 280.0
Samples: 4

Max nTPM: 304.0
Min nTPM: 256.5
Sample A Male 280.7
Sample B Male 256.5
Sample C Female 304.0
Sample D Female 278.7

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 7.2
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 7.2
72081426 Antisense, RP_051017_01_C05, Mouse strain C57BL/6J (56 days, male) 7.8
68545693 Antisense, RP_050120_01_D05, Mouse strain C57BL/6J (56 days, male) 6.6
Pons
Expression energy: 5.0
72081426 Antisense, RP_051017_01_C05, Mouse strain C57BL/6J (56 days, male) 5.3
68545693 Antisense, RP_050120_01_D05, Mouse strain C57BL/6J (56 days, male) 4.7

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