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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
PRIMARY MOUSE DATA
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: High
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:405.3 nTPM
HPA Brain:1525.8 nTPM
GTEx:405.3 nTPM
FANTOM5:1452.7 Scaled Tags Per Million
Pig:538.5 nTPM
Mouse:347.6 nTPM
Allen mouse:13.3 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA023266Antibody HPA023278Antibody HPA023280Antibody HPA023338Antibody CAB002672
Glial cells HighMediumMediumMediumHigh
Neuronal cells Not detectedNot detectedNot detectedNot detectedNot detected







BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1525.8
Sample id Sample description nTPM
Caudate nucleus
nTPM: 489.8
2288 Male, age 75, left hemisphere 858.9
2481 Female, age 94, left hemisphere 559.5
2846 Female, age 79, unknown 508.9
1854 Male, age 80, left hemisphere 452.8
1781 Male, age 74, unknown 448.2
2290 Female, age 72, unknown 440.7
2289 Male, age 61, right hemisphere 357.2
1857 Female, age 85, left hemisphere 292.5
Globus pallidus, externus
nTPM: 1516.9
1996 Male, age 80, right hemisphere 1880.0
2646 Male, age 61, right hemisphere 1660.8
2772 Female, age 79, unknown 1481.5
2567 Female, age 72, unknown 1394.6
2395 Male, age 75, both hemispheres 1167.8
Globus pallidus, internus
nTPM: 1525.8
2111 Female, age 85, right hemisphere 2389.3
2778 Female, age 91, both hemispheres 1745.1
2287 Male, age 75, right hemisphere 1474.9
2566 Female, age 72, unknown 1471.2
2037 Male, age 80, right hemisphere 1410.5
1818 Male, age 74, unknown 1356.1
2483 Female, age 94, right hemisphere 833.4
Nucleus accumbens
nTPM: 676.7
2391 Female, age 94, left hemisphere 1143.8
2286 Male, age 75, left hemisphere 861.2
2732 Male, age 80, right hemisphere 861.0
2698 Female, age 72, unknown 776.9
2824 Male, age 61, right hemisphere 513.1
1783 Male, age 74, unknown 502.5
1806 Female, age 85, left hemisphere 494.2
1856 Female, age 91, right hemisphere 261.0
Nucleus basalis of Meynert
nTPM: 826.4
2569 Male, age 61, both hemispheres 1448.3
2821 Male, age 75, both hemispheres 740.1
2484 Female, age 94, left hemisphere 559.5
2393 Male, age 80, right hemisphere 557.6
Nucleus of the diagonal band
nTPM: 255.9
1812 Female, age 91, both hemispheres 350.2
2029 Male, age 61, right hemisphere 290.4
1979 Male, age 74, unknown 273.2
2775 Male, age 80, right hemisphere 194.8
2195 Female, age 85, both hemispheres 171.2
Putamen
nTPM: 590.8
1829 Male, age 74, unknown 763.2
2647 Male, age 75, left hemisphere 759.6
2482 Female, age 94, left hemisphere 751.7
2489 Female, age 72, unknown 610.7
1937 Female, age 91, right hemisphere 539.0
2466 Female, age 79, unknown 483.7
1838 Male, age 80, right hemisphere 227.5
Septal nuclei
nTPM: 382.0
2394 Male, age 61, left hemisphere 771.2
2199 Male, age 80, right hemisphere 449.0
2059 Female, age 85, both hemispheres 383.0
2629 Female, age 94, right hemisphere 329.7
2031 Female, age 72, unknown 279.3
2009 Female, age 91, both hemispheres 272.4
1960 Male, age 74, unknown 189.6
Stria terminalis, bed nucleus
nTPM: 355.7
1974 Female, age 91, both hemispheres 427.7
2201 Male, age 74, unknown 356.2
2486 Female, age 94, both hemispheres 283.0

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

405.3
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 270.4
Samples: 246

Max nTPM: 1053.8
Min nTPM: 61.0
Std nTPM: 133.6
Median nTPM: 240.8
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 1053.8
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 936.8
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 605.6
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 600.7
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 598.4
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 576.4
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 558.7
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 542.9
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 542.1
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 535.9
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 534.5
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 529.3
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 513.8
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 510.4
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 503.4
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 501.0
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 500.9
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 499.7
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 491.5
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 488.2
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 482.0
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 462.6
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 461.5
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 447.9
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 442.9
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 441.7
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 435.8
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 435.5
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 433.8
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 433.0
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 430.0
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 424.1
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 421.3
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 410.4
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 410.0
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 404.3
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 399.6
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 397.4
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 396.7
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 392.0
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 391.3
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 388.9
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 377.1
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 376.5
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 370.3
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 369.7
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 368.4
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 368.3
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 368.0
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 365.1
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 355.9
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 348.8
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 345.7
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 339.7
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 338.6
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 336.1
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 334.8
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 332.9
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 332.7
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 332.4
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 327.3
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 327.3
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 326.2
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 324.4
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 321.0
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 320.4
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 319.3
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 317.3
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 316.2
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 315.6
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 313.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 312.5
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 310.7
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 308.6
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 308.4
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 308.1
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 305.5
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 302.2
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 300.4
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 296.2
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 296.0
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 295.5
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 294.6
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 294.5
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 294.2
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 294.0
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 291.9
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 291.7
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 291.6
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 291.1
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 287.9
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 286.6
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 284.3
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 284.1
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 282.1
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 276.9
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 276.0
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 271.9
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 271.5
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 270.9
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 269.4
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 267.2
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 264.5
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 262.9
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 261.1
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 258.6
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 257.4
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 256.0
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 255.8
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 255.7
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 255.2
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 254.6
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 252.0
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 251.9
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 249.9
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 249.7
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 249.1
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 249.1
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 244.0
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 243.8
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 242.6
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 242.2
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 240.9
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 240.6
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 240.2
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 239.1
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 233.9
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 233.5
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 231.6
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 231.2
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 229.3
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 228.7
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 225.5
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 224.2
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 223.4
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 221.8
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 220.9
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 219.9
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 219.3
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 219.2
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 217.9
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 217.1
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 214.4
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 213.5
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 213.2
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 212.6
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 211.9
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 210.4
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 210.0
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 209.9
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 209.5
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 208.6
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 207.5
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 206.1
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 204.2
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 204.0
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 201.2
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 198.6
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 197.4
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 196.4
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 195.3
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 194.3
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 193.6
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 193.5
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 192.2
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 192.0
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 191.9
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 191.8
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 191.0
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 190.8
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 190.5
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 189.6
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 187.2
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 186.2
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 186.1
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 186.1
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 185.7
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 185.7
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 183.7
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 182.0
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 181.2
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 180.8
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 179.6
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 179.1
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 177.1
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 172.1
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 169.9
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 169.5
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 169.3
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 167.8
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 167.2
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 166.9
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 165.2
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 163.8
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 163.0
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 162.8
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 161.9
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 161.1
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 160.3
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 157.1
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 156.3
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 156.3
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 155.8
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 153.3
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 152.8
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 152.2
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 151.9
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 151.8
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 151.7
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 151.4
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 150.3
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 148.6
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 148.5
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 147.6
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 145.9
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 143.8
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 143.2
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 143.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 142.9
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 142.5
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 142.3
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 141.1
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 139.7
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 138.9
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 137.1
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 136.5
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 135.4
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 132.4
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 131.8
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 131.1
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 130.2
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 127.7
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 126.9
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 126.5
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 121.3
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 121.0
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 117.5
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 116.4
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 115.7
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 113.6
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 109.8
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 107.4
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 101.5
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 92.4
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 91.7
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 61.0
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 196.6
Samples: 246

Max nTPM: 1266.2
Min nTPM: 60.6
Std nTPM: 136.3
Median nTPM: 156.4
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 1266.2
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 798.7
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 710.7
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 688.5
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 650.7
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 646.3
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 599.1
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 561.6
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 464.4
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 461.8
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 455.8
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 443.1
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 427.1
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 412.5
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 403.9
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 400.3
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 397.3
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 394.7
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 384.9
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 370.0
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 368.1
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 366.2
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 358.4
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 348.8
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 346.4
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 343.6
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 335.1
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 322.5
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 318.8
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 308.7
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 301.7
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 301.3
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 299.0
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 298.2
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 292.1
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 289.0
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 288.9
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 288.8
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 282.0
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 270.8
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 270.5
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 270.0
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 269.5
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 262.8
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 256.8
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 252.3
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 252.3
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 250.2
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 247.5
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 246.2
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 242.5
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 239.8
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 239.2
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 239.1
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 237.1
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 237.0
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 234.8
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 234.0
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 233.3
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 232.8
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 230.6
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 230.4
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 230.2
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 228.1
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 226.4
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 224.5
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 222.6
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 221.5
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 216.9
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 216.0
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 215.8
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 214.3
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 212.6
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 208.9
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 206.4
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 206.0
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 204.4
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 203.7
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 201.1
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 198.7
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 196.9
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 193.3
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 192.1
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 188.0
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 186.3
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 186.3
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 186.1
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 185.6
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 185.0
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 184.5
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 184.3
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 182.8
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 181.4
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 180.9
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 178.6
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 177.2
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 176.8
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 176.6
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 176.0
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 175.7
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 174.4
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 173.3
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 172.4
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 172.4
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 169.5
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 169.3
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 169.2
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 167.3
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 166.9
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 165.5
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 165.4
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 165.1
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 162.9
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 162.7
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 160.4
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 160.0
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 159.5
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 159.0
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 158.9
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 158.7
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 158.1
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 157.0
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 156.9
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 155.8
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 155.7
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 155.3
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 154.8
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 154.7
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 153.9
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 153.4
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 153.3
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 153.0
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 151.6
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 151.2
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 151.0
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 150.9
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 150.8
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 149.6
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 148.7
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 147.5
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 145.7
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 145.1
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 143.6
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 143.4
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 142.6
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 142.0
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 140.9
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 140.4
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 140.3
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 140.2
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 140.2
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 139.7
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 137.8
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 137.7
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 137.4
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 137.2
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 136.3
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 136.2
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 135.5
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 135.3
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 133.6
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 132.7
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 132.1
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 131.5
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 130.4
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 129.3
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 128.5
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 128.4
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 128.2
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 128.1
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 128.1
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 127.2
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 125.7
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 125.6
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 125.5
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 125.2
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 123.8
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 123.6
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 122.6
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 121.2
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 121.2
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 121.2
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 120.9
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 120.4
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 119.5
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 118.4
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 118.3
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 117.6
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 117.4
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 117.4
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 115.6
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 115.2
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 114.8
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 112.7
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 112.2
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 112.1
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 109.4
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 109.3
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 109.0
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 106.4
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 106.0
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 104.6
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 103.6
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 103.2
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 102.4
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 101.8
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 101.8
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 101.8
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 101.5
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 99.8
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 98.6
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 98.6
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 97.4
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 97.0
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 96.3
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 95.5
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 95.4
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 95.1
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 94.4
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 94.3
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 93.8
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 93.7
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 93.4
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 93.2
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 92.3
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 91.2
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 89.3
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 86.6
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 86.2
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 86.2
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 85.3
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 84.7
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 83.6
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 83.1
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 82.9
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 82.4
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 80.4
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 76.5
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 75.9
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 75.8
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 75.0
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 73.3
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 70.2
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 69.8
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 63.5
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 60.6
Show allShow less
Brain - Putamen (basal ganglia)
Average nTPM: 405.3
Samples: 205

Max nTPM: 1552.6
Min nTPM: 140.7
Std nTPM: 181.7
Median nTPM: 379.6
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 1552.6
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 1011.1
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 937.4
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 931.1
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 852.7
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 827.7
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 798.0
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 767.7
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 721.7
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 712.0
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 703.7
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 694.4
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 678.8
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 666.1
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 661.8
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 643.3
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 639.6
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 638.7
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 638.2
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 633.7
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 623.7
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 606.4
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 592.6
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 590.6
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 587.5
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 585.4
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 578.1
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 570.8
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 569.4
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 569.2
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 564.6
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 564.2
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 559.8
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 558.3
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 549.4
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 547.3
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 547.1
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 539.9
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 537.1
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 535.8
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 532.5
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 531.9
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 530.0
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 529.6
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 529.0
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 524.9
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 516.9
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 515.5
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 513.9
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 509.3
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 504.0
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 499.0
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 498.0
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 494.3
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 490.6
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 485.8
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 480.6
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 480.2
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 479.8
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 476.3
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 476.2
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 474.8
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 472.5
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 467.6
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 466.3
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 465.0
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 460.4
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 459.5
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 450.0
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 447.6
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 444.0
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 442.1
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 439.1
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 437.9
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 433.4
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 429.8
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 429.7
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 427.4
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 425.1
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 424.0
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 417.8
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 415.7
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 412.5
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 409.3
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 409.1
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 407.1
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 404.3
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 402.7
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 401.6
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 400.7
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 400.2
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 399.1
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 398.6
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 394.4
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 391.0
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 387.1
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 386.1
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 386.0
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 385.0
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 385.0
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 384.7
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 382.0
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 379.6
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 377.0
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 375.1
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 374.9
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 373.5
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 372.2
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 369.2
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 368.1
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 367.9
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 367.5
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 364.0
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 359.3
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 358.3
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 356.0
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 353.5
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 352.6
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 344.1
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 343.5
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 342.5
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 340.5
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 338.2
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 336.8
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 333.6
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 332.9
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 329.7
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 323.3
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 320.5
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 320.1
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 317.6
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 313.2
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 312.0
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 310.4
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 308.5
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 308.4
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 308.0
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 306.5
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 305.3
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 302.4
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 301.0
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 298.6
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 294.5
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 293.4
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 290.3
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 289.1
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 287.6
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 283.4
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 283.3
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 280.3
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 278.9
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 276.9
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 276.8
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 275.3
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 273.5
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 272.2
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 271.9
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 266.4
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 265.5
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 265.3
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 265.0
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 262.4
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 259.1
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 258.5
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 253.2
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 251.7
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 249.6
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 242.7
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 242.6
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 239.5
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 239.4
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 238.1
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 236.2
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 235.9
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 231.9
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 228.7
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 228.2
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 226.6
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 221.7
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 219.9
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 218.7
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 218.1
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 217.5
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 210.8
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 210.4
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 209.5
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 208.7
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 207.1
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 206.0
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 205.9
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 202.9
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 201.5
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 195.7
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 192.2
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 190.9
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 184.8
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 179.6
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 179.1
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 170.3
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 169.2
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 166.6
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 154.0
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 149.9
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 142.6
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 140.7
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

1452.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 271.1
FF:10164-103B2 76 years, female 271.1
Nucleus accumbens
Scaled Tags Per Million: 796.9
FF:10037-101F1 23-56 years, mixed 796.9
Putamen
Scaled Tags Per Million: 262.0
FF:10176-103C5 60 years, female 262.0
Globus pallidus
Scaled Tags Per Million: 1452.7
FF:10175-103C4 60 years, female 1930.5
FF:10161-103A8 76 years, female 974.9

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

538.5
Pig sample Sample description nTPM
Caudate
nTPM: 157.1
Samples: 4

Max nTPM: 163.9
Min nTPM: 153.3
Sample A Female 163.9
Sample B Female 153.6
Sample C Male 153.3
Sample D Male 157.7
Putamen
nTPM: 538.5
Samples: 4

Max nTPM: 936.0
Min nTPM: 247.3
Sample A Female 936.0
Sample B Female 247.3
Sample C Male 339.6
Sample D Male 631.2
Septum
nTPM: 310.0
Samples: 4

Max nTPM: 400.4
Min nTPM: 218.9
Sample A Female 314.9
Sample B Female 218.9
Sample C Male 305.6
Sample D Male 400.4
Ventral pallidum
nTPM: 475.3
Samples: 4

Max nTPM: 703.9
Min nTPM: 148.9
Sample A Female 148.9
Sample B Female 402.3
Sample C Male 646.1
Sample D Male 703.9

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

347.6
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 347.6
Samples: 4

Max nTPM: 381.9
Min nTPM: 335.2
Sample A Male 337.2
Sample B Male 381.9
Sample C Female 336.1
Sample D Female 335.2
Septum
nTPM: 345.3
Samples: 4

Max nTPM: 452.2
Min nTPM: 220.3
Sample A Male 220.3
Sample B Male 311.7
Sample C Female 396.9
Sample D Female 452.2
Ventral forebrain
nTPM: 206.9
Samples: 4

Max nTPM: 242.8
Min nTPM: 183.0
Sample A Male 196.1
Sample B Male 183.0
Sample C Female 242.8
Sample D Female 205.8

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

13.3
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 9.7
77371841 Antisense, RP_070129_01_A04, Mouse strain C57BL/6J (56 days, male) 11.8
79488913 Antisense, RP_070129_01_A04, Mouse strain C57BL/6J (56 days, male) 9.5
1175 Antisense, RP_040407_02_H04, Mouse strain C57BL/6J (56 days, male) 7.6
1176 Antisense, RP_040407_02_H04, Mouse strain C57BL/6J (56 days, male) 7.4
Pallidum
Expression energy: 13.3
77371841 Antisense, RP_070129_01_A04, Mouse strain C57BL/6J (56 days, male) 16.4
79488913 Antisense, RP_070129_01_A04, Mouse strain C57BL/6J (56 days, male) 13.7
1176 Antisense, RP_040407_02_H04, Mouse strain C57BL/6J (56 days, male) 10.2
1175 Antisense, RP_040407_02_H04, Mouse strain C57BL/6J (56 days, male) 10.1

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