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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:763.6 nTPM
HPA Brain:1516.3 nTPM
GTEx:763.6 nTPM
FANTOM5:947.6 Scaled Tags Per Million
Pig:221.5 nTPM
Mouse:44.1 nTPM
Allen mouse:1.2 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA029507
Glial cells Medium
Neuronal cells Not detected



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1516.3
Sample id Sample description nTPM
Caudate nucleus
nTPM: 364.7
2846 Female, age 79, unknown 514.9
1781 Male, age 74, unknown 463.9
2288 Male, age 75, left hemisphere 453.0
1854 Male, age 80, left hemisphere 332.0
2290 Female, age 72, unknown 322.9
2481 Female, age 94, left hemisphere 303.9
2289 Male, age 61, right hemisphere 276.9
1857 Female, age 85, left hemisphere 250.4
Globus pallidus, externus
nTPM: 1516.3
2567 Female, age 72, unknown 2131.5
2646 Male, age 61, right hemisphere 1888.0
2395 Male, age 75, both hemispheres 1281.4
1996 Male, age 80, right hemisphere 1162.9
2772 Female, age 79, unknown 1117.6
Globus pallidus, internus
nTPM: 1318.1
2483 Female, age 94, right hemisphere 1854.3
2566 Female, age 72, unknown 1677.8
2111 Female, age 85, right hemisphere 1486.6
2287 Male, age 75, right hemisphere 1210.2
2778 Female, age 91, both hemispheres 1165.0
1818 Male, age 74, unknown 967.3
2037 Male, age 80, right hemisphere 865.4
Nucleus accumbens
nTPM: 479.1
2732 Male, age 80, right hemisphere 721.7
2698 Female, age 72, unknown 706.0
2391 Female, age 94, left hemisphere 621.5
1783 Male, age 74, unknown 420.9
1806 Female, age 85, left hemisphere 399.3
2824 Male, age 61, right hemisphere 361.2
2286 Male, age 75, left hemisphere 339.6
1856 Female, age 91, right hemisphere 262.8
Nucleus basalis of Meynert
nTPM: 986.7
2569 Male, age 61, both hemispheres 2114.6
2484 Female, age 94, left hemisphere 722.1
2821 Male, age 75, both hemispheres 651.1
2393 Male, age 80, right hemisphere 458.9
Nucleus of the diagonal band
nTPM: 379.5
1812 Female, age 91, both hemispheres 536.2
2775 Male, age 80, right hemisphere 368.7
2029 Male, age 61, right hemisphere 358.3
1979 Male, age 74, unknown 318.1
2195 Female, age 85, both hemispheres 316.0
Putamen
nTPM: 519.4
2647 Male, age 75, left hemisphere 864.7
2489 Female, age 72, unknown 676.3
1829 Male, age 74, unknown 638.5
2466 Female, age 79, unknown 450.0
1937 Female, age 91, right hemisphere 418.4
2482 Female, age 94, left hemisphere 385.4
1838 Male, age 80, right hemisphere 202.5
Septal nuclei
nTPM: 444.6
2394 Male, age 61, left hemisphere 744.5
2199 Male, age 80, right hemisphere 461.0
2031 Female, age 72, unknown 426.6
1960 Male, age 74, unknown 398.2
2009 Female, age 91, both hemispheres 375.4
2629 Female, age 94, right hemisphere 359.9
2059 Female, age 85, both hemispheres 346.5
Stria terminalis, bed nucleus
nTPM: 374.2
1974 Female, age 91, both hemispheres 502.5
2201 Male, age 74, unknown 367.1
2486 Female, age 94, both hemispheres 253.1

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

763.6
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 417.3
Samples: 246

Max nTPM: 2601.0
Min nTPM: 89.1
Std nTPM: 326.2
Median nTPM: 317.4
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 2601.0
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 2018.2
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 1785.2
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 1563.3
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 1453.1
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 1342.5
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 1261.7
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 1250.3
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 1240.4
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 1231.5
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 1187.1
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 1086.3
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 1018.2
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 1017.1
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 994.3
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 964.0
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 959.9
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 927.9
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 924.6
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 826.5
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 821.4
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 790.7
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 788.7
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 783.3
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 772.7
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 757.1
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 730.2
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 725.5
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 723.2
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 707.6
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 694.7
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 690.6
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 683.1
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 666.2
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 649.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 628.7
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 625.6
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 621.6
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 617.9
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 610.0
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 596.2
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 594.7
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 589.6
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 588.2
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 581.7
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 577.1
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 564.0
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 563.4
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 563.1
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 557.5
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 554.0
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 544.7
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 544.6
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 528.3
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 526.7
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 524.1
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 522.0
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 521.4
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 505.0
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 497.5
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 495.1
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 493.7
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 492.0
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 484.7
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 480.7
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 477.6
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 472.7
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 466.7
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 458.2
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 454.8
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 453.5
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 451.3
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 447.7
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 447.1
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 443.1
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 441.4
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 437.1
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 435.6
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 435.2
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 432.6
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 431.9
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 431.2
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 428.6
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 424.4
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 423.9
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 416.2
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 414.3
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 413.9
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 413.0
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 409.9
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 406.7
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 405.7
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 394.4
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 393.3
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 390.0
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 384.8
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 382.4
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 382.4
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 379.9
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 375.7
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 374.6
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 374.6
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 372.9
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 364.5
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 363.3
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 355.9
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 354.8
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 353.5
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 347.8
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 344.7
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 343.7
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 339.3
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 334.7
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 332.2
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 332.2
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 330.9
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 328.5
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 327.8
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 327.4
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 326.6
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 322.9
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 322.7
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 318.1
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 316.7
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 316.2
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 315.0
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 312.0
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 303.7
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 303.5
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 303.0
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 302.9
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 302.0
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 300.9
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 300.8
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 300.3
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 298.1
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 297.4
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 295.1
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 293.0
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 290.8
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 289.5
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 286.6
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 285.4
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 284.3
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 281.7
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 276.9
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 274.0
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 271.3
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 269.9
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 269.7
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 268.8
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 268.8
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 266.3
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 261.5
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 261.0
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 259.9
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 257.8
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 257.7
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 255.4
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 250.2
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 246.9
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 244.9
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 243.1
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 241.6
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 240.7
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 240.6
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 239.4
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 237.7
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 237.3
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 236.4
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 235.7
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 228.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 224.1
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 223.8
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 223.8
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 223.4
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 222.1
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 221.2
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 217.8
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 216.6
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 216.3
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 216.1
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 215.9
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 214.5
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 214.0
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 213.9
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 213.8
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 213.2
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 210.7
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 209.2
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 207.5
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 206.9
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 206.3
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 204.7
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 203.4
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 202.7
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 197.7
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 194.3
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 194.2
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 194.0
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 193.8
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 193.3
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 193.0
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 190.8
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 190.7
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 188.4
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 187.9
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 185.9
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 184.0
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 182.2
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 181.2
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 179.4
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 177.9
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 176.5
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 176.4
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 175.8
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 174.1
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 173.3
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 169.8
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 169.8
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 169.8
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 169.6
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 167.5
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 161.3
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 159.7
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 159.3
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 157.3
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 153.5
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 152.7
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 148.5
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 144.4
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 144.3
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 144.1
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 143.1
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 141.9
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 140.9
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 138.4
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 135.1
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 135.1
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 133.8
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 133.5
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 130.6
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 121.9
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 109.6
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 108.3
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 89.1
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 401.9
Samples: 246

Max nTPM: 2783.9
Min nTPM: 19.4
Std nTPM: 389.5
Median nTPM: 267.1
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 2783.9
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 2119.3
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 2073.4
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 1854.1
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 1701.2
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 1699.1
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 1688.4
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 1293.1
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 1285.1
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 1264.3
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 1228.2
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 1227.7
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 1204.6
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 1161.4
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 1130.2
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 1109.7
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 1094.9
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 1091.1
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 1089.2
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 1047.8
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 979.8
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 974.2
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 957.6
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 918.8
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 916.5
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 890.5
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 862.7
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 853.4
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 743.6
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 722.5
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 716.5
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 715.0
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 687.3
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 671.7
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 669.6
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 669.1
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 653.9
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 637.1
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 631.3
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 624.5
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 622.7
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 621.5
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 616.7
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 594.2
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 585.8
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 583.1
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 574.2
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 572.5
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 565.3
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 557.4
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 544.2
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 536.2
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 520.6
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 519.6
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 511.3
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 510.9
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 503.5
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 503.3
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 500.5
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 498.1
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 494.1
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 486.2
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 484.9
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 477.5
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 474.1
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 473.9
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 470.5
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 453.6
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 450.5
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 439.0
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 436.7
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 431.6
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 419.0
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 412.5
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 409.7
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 408.3
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 406.7
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 405.0
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 403.6
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 401.4
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 397.8
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 382.8
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 374.1
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 368.2
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 363.1
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 357.5
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 357.4
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 356.7
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 354.0
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 354.0
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 341.8
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 339.1
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 336.6
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 332.1
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 329.9
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 327.6
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 325.4
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 324.0
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 323.2
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 323.0
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 318.6
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 318.0
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 316.7
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 307.8
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 305.2
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 304.8
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 304.7
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 300.4
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 297.2
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 296.5
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 296.4
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 295.5
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 293.8
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 291.4
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 291.4
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 288.9
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 282.0
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 277.9
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 277.0
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 273.9
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 269.7
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 269.1
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 267.3
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 266.9
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 265.0
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 263.3
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 251.1
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 245.8
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 244.6
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 243.2
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 242.7
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 242.6
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 242.0
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 241.4
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 240.5
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 237.5
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 236.0
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 234.5
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 232.3
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 228.7
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 226.6
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 225.9
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 223.4
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 223.3
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 223.2
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 220.4
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 219.8
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 219.4
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 211.2
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 209.5
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 207.8
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 207.6
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 207.2
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 205.4
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 201.9
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 198.5
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 196.9
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 193.4
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 192.8
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 191.8
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 189.9
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 186.8
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 186.3
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 183.3
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 183.2
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 182.7
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 181.7
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 181.3
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 181.1
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 181.0
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 179.2
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 177.5
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 176.5
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 175.9
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 173.5
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 172.1
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 169.4
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 168.5
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 167.5
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 166.9
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 166.5
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 166.4
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 165.4
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 162.6
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 162.2
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 162.2
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 161.9
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 161.5
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 161.4
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 159.2
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 158.6
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 156.8
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 156.1
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 151.0
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 150.2
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 149.2
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 149.1
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 148.4
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 148.1
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 148.0
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 147.1
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 147.1
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 146.9
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 144.3
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 143.1
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 142.3
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 141.4
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 140.1
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 139.7
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 139.6
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 138.5
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 137.7
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 137.7
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 137.4
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 136.7
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 135.2
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 134.3
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 134.1
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 133.2
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 132.0
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 129.8
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 124.0
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 123.4
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 122.9
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 121.4
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 118.9
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 117.3
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 116.3
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 115.9
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 114.5
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 113.5
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 113.3
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 112.7
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 109.8
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 108.4
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 106.6
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 105.0
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 104.4
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 103.6
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 103.0
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 97.5
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 96.2
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 90.3
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 85.3
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 85.0
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 19.4
Show allShow less
Brain - Putamen (basal ganglia)
Average nTPM: 763.6
Samples: 205

Max nTPM: 3575.3
Min nTPM: 135.9
Std nTPM: 559.5
Median nTPM: 614.1
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 3575.3
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 3490.2
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 3337.3
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 2722.3
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 2096.8
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 2062.2
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 1956.1
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 1891.3
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 1866.0
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 1863.4
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 1750.2
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 1742.5
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 1698.4
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 1696.8
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 1629.9
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 1600.2
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 1518.3
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 1479.6
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 1453.9
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 1414.2
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 1393.6
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 1385.9
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 1385.2
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 1383.5
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 1338.8
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 1288.0
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 1251.0
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 1245.6
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 1222.9
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 1222.5
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 1211.8
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 1198.9
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 1181.5
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 1175.4
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 1172.7
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 1164.6
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 1151.6
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 1150.6
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 1130.1
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 1125.6
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 1113.0
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 1106.1
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 1095.4
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 1084.9
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 1058.6
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 1048.7
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 1046.2
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 1041.1
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 1033.3
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 1028.1
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 1022.8
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 993.3
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 978.5
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 978.0
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 935.4
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 908.3
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 889.0
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 886.9
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 877.2
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 867.0
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 866.0
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 864.6
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 848.9
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 836.6
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 832.7
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 830.5
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 824.4
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 816.5
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 811.5
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 805.4
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 791.0
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 790.7
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 786.5
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 778.0
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 775.9
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 752.8
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 745.3
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 742.7
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 738.7
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 731.6
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 730.8
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 724.5
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 717.4
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 713.3
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 711.2
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 701.3
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 686.1
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 676.6
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 675.9
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 674.9
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 671.6
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 669.7
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 666.9
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 664.3
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 660.7
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 658.2
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 656.8
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 643.5
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 642.2
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 633.5
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 622.2
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 615.1
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 614.1
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 611.8
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 609.7
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 606.5
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 597.2
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 596.3
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 588.3
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 586.7
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 583.1
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 582.3
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 579.0
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 578.1
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 574.4
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 572.0
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 568.5
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 566.7
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 547.4
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 547.2
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 546.7
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 538.1
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 533.2
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 532.4
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 531.6
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 527.3
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 525.2
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 522.9
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 522.8
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 516.9
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 500.0
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 497.4
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 495.4
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 492.3
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 486.7
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 484.0
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 481.3
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 479.7
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 474.9
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 468.7
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 468.1
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 465.4
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 456.0
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 450.4
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 448.1
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 443.1
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 430.7
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 427.3
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 425.9
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 420.2
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 420.1
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 419.8
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 416.0
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 410.1
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 406.9
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 404.2
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 397.9
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 397.6
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 364.1
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 348.5
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 347.6
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 345.8
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 336.1
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 335.3
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 335.3
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 329.3
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 328.4
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 326.1
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 315.0
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 314.1
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 295.7
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 294.3
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 283.7
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 271.8
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 270.7
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 268.9
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 265.3
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 260.8
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 260.6
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 257.8
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 257.4
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 255.1
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 247.5
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 241.7
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 239.2
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 237.9
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 234.3
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 227.6
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 219.7
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 216.0
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 207.0
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 205.2
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 200.5
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 199.4
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 192.3
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 187.7
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 174.0
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 171.0
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 168.8
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 163.6
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 158.9
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 158.0
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 157.1
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 150.5
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 135.9
Show allShow less

BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

947.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 221.8
FF:10164-103B2 76 years, female 221.8
Nucleus accumbens
Scaled Tags Per Million: 642.2
FF:10037-101F1 23-56 years, mixed 642.2
Putamen
Scaled Tags Per Million: 298.1
FF:10176-103C5 60 years, female 298.1
Globus pallidus
Scaled Tags Per Million: 947.6
FF:10161-103A8 76 years, female 1030.5
FF:10175-103C4 60 years, female 864.8

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

221.5
Pig sample Sample description nTPM
Caudate
nTPM: 123.3
Samples: 4

Max nTPM: 139.6
Min nTPM: 106.6
Sample A Female 122.9
Sample B Female 106.6
Sample C Male 139.6
Sample D Male 124.1
Putamen
nTPM: 221.5
Samples: 4

Max nTPM: 275.4
Min nTPM: 157.1
Sample A Female 275.4
Sample B Female 157.1
Sample C Male 224.6
Sample D Male 228.9
Septum
nTPM: 169.0
Samples: 4

Max nTPM: 202.0
Min nTPM: 133.3
Sample A Female 202.0
Sample B Female 133.3
Sample C Male 169.3
Sample D Male 171.2
Ventral pallidum
nTPM: 202.5
Samples: 4

Max nTPM: 250.9
Min nTPM: 144.7
Sample A Female 144.7
Sample B Female 170.0
Sample C Male 244.2
Sample D Male 250.9

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

44.1
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 32.9
Samples: 4

Max nTPM: 38.7
Min nTPM: 27.2
Sample A Male 27.2
Sample B Male 29.5
Sample C Female 36.2
Sample D Female 38.7
Septum
nTPM: 44.1
Samples: 4

Max nTPM: 51.3
Min nTPM: 39.8
Sample A Male 51.3
Sample B Male 39.8
Sample C Female 45.3
Sample D Female 40.0
Ventral forebrain
nTPM: 36.8
Samples: 4

Max nTPM: 39.7
Min nTPM: 34.2
Sample A Male 36.5
Sample B Male 39.7
Sample C Female 34.2
Sample D Female 36.8

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

1.2
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 0.7
68845502 Antisense, RP_050224_01_H07, Mouse strain C57BL/6J (56 days, male) 0.8
71587888 Antisense, RP_050725_03_G01, Mouse strain C57BL/6J (56 days, male) 0.6
Pallidum
Expression energy: 1.2
68845502 Antisense, RP_050224_01_H07, Mouse strain C57BL/6J (56 days, male) 1.4
71587888 Antisense, RP_050725_03_G01, Mouse strain C57BL/6J (56 days, male) 1.0

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