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BRAIN CEREBELLUM Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Cerebellum
CEREBELLUM - Expression summary
Protein expression
Cerebellumi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Bergmann glia - cytoplasm/membrane: Not detected
Bergmann glia - nucleus: Not detected
GLUC cells - cytoplasm/membrane: Not detected
GLUC cells - nucleus: Not detected
Granular cells - cytoplasm/membrane: High
Granular cells - nucleus: Not detected
Molecular layer - neuropil: Not detected
Molecular layer cells - cytoplasm/membrane: Not detected
Molecular layer cells - nucleus: Not detected
Processes in granular layer: High
Processes in molecular layer: High
Processes in white matter: High
Purkinje cells - cytoplasm/membrane: Not detected
Purkinje cells - dendrites: Not detected
Purkinje cells - nucleus: Not detected
Synaptic glomeruli - capsule: Not detected
Synaptic glomeruli - core: Not detected
White matter cells - cytoplasm/membrane: High
White matter cells - nucleus: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:171.4 nTPM
HPA Brain:962.8 nTPM
GTEx:171.4 nTPM
FANTOM5:260.3 Scaled Tags Per Million
Pig:117.5 nTPM
Mouse:47.1 nTPM
Allen mouse:0.8 Expression energy

CEREBELLUM - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA029507
Bergmann glia - cytoplasm/membrane Not detected
Bergmann glia - nucleus Not detected
GLUC cells - cytoplasm/membrane Not detected
GLUC cells - nucleus Not detected
Purkinje cells - cytoplasm/membrane Not detected
Purkinje cells - dendrites Not detected
Purkinje cells - nucleus Not detected
Granular cells - cytoplasm/membrane High
Granular cells - nucleus Not detected
Molecular layer - neuropil Not detected
Molecular layer cells - cytoplasm/membrane Not detected
Molecular layer cells - nucleus Not detected
Processes in granular layer High
Processes in molecular layer High
Processes in white matter High
Synaptic glomeruli - capsule Not detected
Synaptic glomeruli - core Not detected
White matter cells - cytoplasm/membrane High
White matter cells - nucleus Not detected



CEREBELLUM - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

962.8
Sample id Sample description nTPM
Cerebellar cortex
nTPM: 293.5
2003 Female, age 85, right hemisphere 750.0
1769 Male, age 76, right hemisphere 278.1
1788 Male, age 55, unknown 271.8
1768 Female, age 72, unknown 265.5
2006 Male, age 61, right hemisphere 250.2
2055 Female, age 91, right hemisphere 219.5
1774 Male, age 80, left hemisphere 182.9
2101 Male, age 74, right hemisphere 130.2
Cerebellar nuclei
nTPM: 962.8
1879 Male, age 55, unknown 1249.4
2005 Male, age 80, left hemisphere 1176.2
1871 Male, age 74, unknown 1065.7
2882 Male, age 76, left hemisphere 1029.2
1966 Female, age 91, left hemisphere 920.4
2175 Male, age 61, right hemisphere 885.2
2783 Female, age 72, unknown 839.9
2177 Female, age 85, both hemispheres 775.5
2318 Male, age 74, left hemisphere 724.1
Flocculonodular lobe
nTPM: 241.9
1765 Male, age 55, unknown 370.9
1792 Male, age 74, unknown 269.2
1767 Male, age 76, left hemisphere 264.5
2176 Female, age 91, right hemisphere 218.1
2004 Male, age 61, right hemisphere 214.7
1771 Male, age 80, left hemisphere 178.6
1835 Female, age 85, right hemisphere 177.4
Vermis
nTPM: 209.9
1770 Male, age 76, left hemisphere 313.7
1778 Female, age 91, left hemisphere 233.6
1928 Female, age 72, unknown 218.6
1766 Male, age 55, unknown 211.3
1825 Male, age 74, unknown 211.3
2834 Male, age 80, left hemisphere 209.7
2460 Male, age 61, both hemispheres 178.4
1988 Female, age 85, left hemisphere 164.5
1751 Male, age 74, right hemisphere 147.9

CEREBELLUM - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

171.4
GTEx sample id Sample description nTPM
Brain - Cerebellar Hemisphere
Average nTPM: 171.4
Samples: 215

Max nTPM: 1292.6
Min nTPM: 98.3
Std nTPM: 104.2
Median nTPM: 146.3
GTEX-1LKK1-0011-R11a-SM-EXOIG 50-59 years, female 1292.6
GTEX-1CAV2-0011-R11a-SM-ARU8D 40-49 years, female 640.0
GTEX-14C39-0011-R11b-SM-5YYAF 40-49 years, male 632.0
GTEX-1IOXB-0011-R11a-SM-A9G1X 50-59 years, male 381.1
GTEX-N7MT-0011-R11A-SM-2I3DZ 60-69 years, female 371.9
GTEX-WHSE-0011-R11A-SM-3P5YY 20-29 years, male 339.2
GTEX-1J8Q2-0011-R11a-SM-A9SKI 60-69 years, male 339.2
GTEX-16XZZ-0011-R11a-SM-7EPI3 60-69 years, male 338.1
GTEX-13NYB-0011-R11a-SM-5KM3Q 40-49 years, male 334.9
GTEX-ZF28-0011-R11a-SM-4WWEI 60-69 years, male 328.6
GTEX-131XW-0011-R11a-SM-5DUV9 50-59 years, female 321.1
GTEX-1HUB1-0011-R11b-SM-CE6SC 60-69 years, male 312.0
GTEX-1B8SG-0011-R11a-SM-7P8PF 50-59 years, male 311.5
GTEX-16Z82-0011-R11a-SM-79OKJ 60-69 years, male 309.6
GTEX-139UW-0011-R11a-SM-5IJGN 60-69 years, male 306.0
GTEX-Z93S-0011-R11a-SM-4RGNN 50-59 years, male 285.1
GTEX-145MI-0011-R11a-SM-5P9JZ 60-69 years, female 264.0
GTEX-17EVQ-0011-R11a-SM-7LT9C 70-79 years, male 262.5
GTEX-UTHO-0011-R11A-SM-3GIJE 60-69 years, male 250.6
GTEX-13QIC-0011-R11b-SM-5O9BU 60-69 years, female 240.7
GTEX-11DYG-0011-R11a-SM-DNZZP 60-69 years, male 235.3
GTEX-1R9K4-0011-R11a-SM-EZ6N9 60-69 years, male 234.7
GTEX-OHPN-0011-R11A-SM-2I5FM 60-69 years, female 234.4
GTEX-1C64N-0011-R11b-SM-7P8Q6 50-59 years, male 229.9
GTEX-WL46-0011-R11A-SM-3MJFT 50-59 years, male 227.5
GTEX-1IKOH-0011-R11a-SM-AHZ38 60-69 years, female 219.3
GTEX-12126-0011-R11a-SM-5BC6X 20-29 years, male 213.3
GTEX-1GZHY-0011-R11a-SM-C1YRQ 50-59 years, female 212.8
GTEX-1IL2U-0011-R11a-SM-CE6SO 60-69 years, male 211.1
GTEX-13OVJ-0011-R11a-SM-5P9H8 50-59 years, female 206.8
GTEX-QMR6-0011-R11A-SM-32PKK 50-59 years, male 206.2
GTEX-1H3VE-0011-R11b-SM-C1YRP 40-49 years, male 204.5
GTEX-1IKK5-0011-R11a-SM-C1YRX 60-69 years, male 204.1
GTEX-11WQC-0011-R11b-SM-57WD6 60-69 years, male 201.8
GTEX-13CZV-0011-R11b-SM-5N9FN 60-69 years, male 201.0
GTEX-X261-0011-R11A-SM-4E3JY 50-59 years, male 197.1
GTEX-1IGQW-0011-R11a-SM-C1YRV 60-69 years, male 196.4
GTEX-ZE7O-0011-R11a-SM-57WBC 50-59 years, female 191.8
GTEX-P44H-0011-R11A-SM-2XCER 40-49 years, male 190.3
GTEX-1F75A-0011-R11a-SM-AHZ35 50-59 years, male 189.0
GTEX-XMD1-0011-R11A-SM-4AT5J 60-69 years, male 188.9
GTEX-13FTY-0011-R11a-SM-5IJEA 40-49 years, female 188.7
GTEX-1M4P7-0011-R11b-SM-EXOIK 60-69 years, male 188.2
GTEX-13JVG-0011-R11a-SM-5KM53 60-69 years, male 188.1
GTEX-1R9PO-0011-R11b-SM-EZ6NB 60-69 years, female 187.9
GTEX-1GTWX-0011-R11b-SM-C1YQJ 60-69 years, male 187.8
GTEX-1E1VI-0011-R11a-SM-9OSWI 50-59 years, male 184.0
GTEX-11ZUS-0011-R11b-SM-5BC7B 30-39 years, male 183.8
GTEX-16NPV-0011-R11a-SM-7IGMK 50-59 years, female 183.1
GTEX-1GMRU-0011-R11b-SM-C1YQ4 50-59 years, male 181.1
GTEX-1GF9W-0011-R11b-SM-9OSXG 60-69 years, male 179.0
GTEX-14PN4-0011-R11a-SM-686ZW 50-59 years, male 178.9
GTEX-131XH-0011-R11a-SM-5EGLN 50-59 years, male 178.6
GTEX-13PLJ-0011-R11b-SM-5O9BS 60-69 years, female 177.5
GTEX-13PVQ-0011-R11a-SM-5O9DU 50-59 years, male 175.1
GTEX-NPJ8-0011-R11A-SM-2YUMS 40-49 years, male 175.1
GTEX-ZVT3-0011-R11b-SM-57WBI 60-69 years, female 175.1
GTEX-1GZ4I-0011-R11b-SM-9OSWR 50-59 years, male 175.1
GTEX-12WSC-0011-R11a-SM-5GU5J 50-59 years, male 174.6
GTEX-NL3H-0011-R11A-SM-2I3E6 60-69 years, male 173.8
GTEX-145LU-0011-R11b-SM-5P9JX 50-59 years, male 173.7
GTEX-11EI6-0011-R11a-SM-DO11V 60-69 years, male 173.6
GTEX-1JJEA-0011-R11a-SM-EXUTE 60-69 years, male 171.8
GTEX-1JJ6O-0011-R11b-SM-EXUS2 60-69 years, male 170.9
GTEX-14E7W-0011-R11a-SM-5ZZVA 70-79 years, male 170.5
GTEX-1HGF4-0011-R11a-SM-C1YRR 60-69 years, male 170.4
GTEX-NL4W-0011-R11A-SM-2I3DW 50-59 years, male 170.0
GTEX-13OVL-0011-R11b-SM-5L3G7 50-59 years, male 169.9
GTEX-1IL2V-0011-R11a-SM-ARU6T 70-79 years, male 169.7
GTEX-17JCI-0011-R11a-SM-7189Y 60-69 years, female 169.5
GTEX-12WSH-0011-R11a-SM-5LZVM 50-59 years, male 168.7
GTEX-15G19-0011-R11b-SM-6LPIH 60-69 years, male 167.7
GTEX-1EKGG-0011-R11a-SM-9QEHZ 60-69 years, male 167.7
GTEX-1F75W-0011-R11b-SM-AHZ34 60-69 years, male 166.6
GTEX-QDT8-0011-R11A-SM-32PKD 30-39 years, female 166.2
GTEX-P44G-0011-R11A-SM-2I3FD 30-39 years, male 165.0
GTEX-12WSD-0011-R11a-SM-9OSVC 60-69 years, female 164.8
GTEX-12WSI-0011-R11b-SM-5P9EZ 50-59 years, male 164.3
GTEX-12ZZZ-0011-R11a-SM-5EGLC 60-69 years, male 163.5
GTEX-1H4P4-0011-R11b-SM-CE6S8 50-59 years, male 162.9
GTEX-13FHP-0011-R11b-SM-5LZXP 50-59 years, male 162.5
GTEX-13NYS-0011-R11b-SM-5MR4P 60-69 years, male 161.2
GTEX-14E6D-0011-R11b-SM-664NP 50-59 years, male 161.1
GTEX-183WM-0011-R11a-SM-718A5 70-79 years, female 160.5
GTEX-RU72-0011-R11A-SM-CM2U1 50-59 years, female 159.8
GTEX-14BIN-0011-R11a-SM-5SI79 50-59 years, female 159.0
GTEX-1I19N-0011-R11b-SM-ARU6Y 70-79 years, male 158.1
GTEX-1A3MX-0011-R11b-SM-7DUGP 60-69 years, male 158.0
GTEX-14BIM-0011-R11b-SM-5S2RN 60-69 years, female 157.9
GTEX-11TTK-0011-R11b-SM-DO112 60-69 years, female 157.9
GTEX-1HBPI-0011-R11b-SM-CE6SH 50-59 years, male 157.8
GTEX-1JMOU-0011-R11b-SM-EXUTA 60-69 years, female 157.7
GTEX-11EMC-0011-R11b-SM-DNZZK 60-69 years, female 156.5
GTEX-ZE9C-0011-R11a-SM-4WKGG 60-69 years, male 154.2
GTEX-Q2AG-0011-R11A-SM-2HMKZ 40-49 years, female 153.9
GTEX-RVPV-0011-R11A-SM-2TF6F 60-69 years, male 153.4
GTEX-13FHO-0011-R11b-SM-5LZYQ 60-69 years, male 152.8
GTEX-1BAJH-0011-R11b-SM-7IGLM 70-79 years, male 152.0
GTEX-13JUV-0011-R11a-SM-5LZYH 40-49 years, female 151.7
GTEX-13OW5-0011-R11b-SM-5L3GG 60-69 years, male 151.6
GTEX-N7MS-0011-R11A-SM-2HMJS 60-69 years, male 151.6
GTEX-11ZTS-0011-R11a-SM-DO113 60-69 years, female 151.4
GTEX-ZAB4-0011-R11a-SM-4SOKI 40-49 years, male 151.1
GTEX-11PRG-0011-R11b-SM-DNZZY 50-59 years, male 150.8
GTEX-145MH-0011-R11a-SM-5P9HQ 50-59 years, male 148.4
GTEX-13O3Q-0011-R11b-SM-5KM2W 50-59 years, male 148.0
GTEX-1F48J-0011-R11b-SM-9OSWV 50-59 years, female 146.7
GTEX-1F52S-0011-R11a-SM-CJI23 60-69 years, female 146.3
GTEX-11DXY-0011-R11a-SM-DNZZN 60-69 years, male 146.1
GTEX-R55E-0011-R11A-SM-2TC6I 20-29 years, male 145.7
GTEX-1H3O1-0011-R11a-SM-A96RV 60-69 years, male 145.5
GTEX-14C5O-0011-R11b-SM-6872H 60-69 years, male 145.4
GTEX-1I1HK-0011-R11a-SM-B2LVN 60-69 years, male 145.3
GTEX-13OW8-0011-R11a-SM-5L3GT 60-69 years, male 145.1
GTEX-13X6I-0011-R11a-SM-5P9HN 60-69 years, male 144.5
GTEX-1GMR8-0011-R11b-SM-9OSX2 50-59 years, female 144.2
GTEX-132Q8-0011-R11b-SM-5DUW9 60-69 years, male 143.1
GTEX-T6MN-0011-R11A-SM-32QOX 50-59 years, male 143.0
GTEX-18A6Q-0011-R11a-SM-72D6H 60-69 years, male 142.4
GTEX-1JMQJ-0011-R11a-SM-EXOJY 50-59 years, male 142.3
GTEX-NPJ7-0011-R11A-SM-2I3E8 60-69 years, female 141.8
GTEX-15DYW-0011-R11a-SM-6LPIT 60-69 years, female 140.8
GTEX-12WSE-0011-R11b-SM-5P9JW 20-29 years, male 140.7
GTEX-13NZA-0011-R11b-SM-5KM4W 60-69 years, male 140.6
GTEX-13RTJ-0011-R11a-SM-5O9CK 60-69 years, male 140.5
GTEX-15ER7-0011-R11a-SM-6LPIL 20-29 years, female 140.2
GTEX-1F7RK-0011-R11b-SM-9QEI2 20-29 years, female 139.0
GTEX-X585-0011-R11B-SM-46MUZ 50-59 years, male 138.9
GTEX-ZDXO-0011-R11a-SM-4WWD9 60-69 years, male 138.8
GTEX-T2IS-0011-R11A-SM-32QPC 20-29 years, female 138.7
GTEX-12WSM-0011-R11a-SM-5DUX8 60-69 years, male 138.6
GTEX-1H1ZS-0011-R11a-SM-C1YQM 70-79 years, male 138.3
GTEX-1ICLZ-0011-R11a-SM-CJI3N 60-69 years, male 137.8
GTEX-1LSVX-0011-R11b-SM-EXOIA 60-69 years, male 137.7
GTEX-T5JC-0011-R11A-SM-32PMB 20-29 years, male 137.4
GTEX-YJ89-0011-R11a-SM-4SOKA 60-69 years, male 136.8
GTEX-13SLW-0011-R11a-SM-5SI8Q 70-79 years, male 136.7
GTEX-1B8L1-0011-R11b-SM-793DJ 60-69 years, male 136.7
GTEX-13OW6-0011-R11a-SM-5L3H2 50-59 years, male 135.4
GTEX-1I1GR-0011-R11a-SM-CM2T5 60-69 years, male 134.7
GTEX-13CF2-0011-R11b-SM-5LZXO 60-69 years, male 134.6
GTEX-144GL-0011-R11b-SM-5P9F6 50-59 years, male 134.4
GTEX-ZVZQ-0011-R11a-SM-51MS6 60-69 years, female 134.4
GTEX-11OF3-0011-R11a-SM-57WCR 60-69 years, male 133.7
GTEX-17F97-0011-R11b-SM-7KFRQ 50-59 years, male 132.7
GTEX-1H3NZ-0011-R11b-SM-CE6SF 60-69 years, male 132.7
GTEX-WWYW-0011-R11A-SM-3NB38 50-59 years, female 132.1
GTEX-1N2DW-0011-R11b-SM-EXOIL 50-59 years, male 131.9
GTEX-13X6J-0011-R11a-SM-5P9HE 50-59 years, male 131.8
GTEX-13FLV-0011-R11a-SM-5LZZ7 50-59 years, male 131.7
GTEX-WZTO-0011-R11A-SM-4E3K9 40-49 years, male 131.6
GTEX-1J1OQ-0011-R11a-SM-A96S3 40-49 years, female 131.3
GTEX-131YS-0011-R11b-SM-5EGLM 60-69 years, female 130.9
GTEX-13OW7-0011-R11a-SM-5O9DY 50-59 years, male 130.9
GTEX-13SLX-0011-R11b-SM-5O9C8 50-59 years, female 130.7
GTEX-1B8SF-0011-R11a-SM-79OOP 60-69 years, male 130.4
GTEX-16YQH-0011-R11b-SM-7LT98 30-39 years, male 129.9
GTEX-Y8DK-0011-R11A-SM-4SOK2 60-69 years, male 128.9
GTEX-12ZZX-0011-R11a-SM-5DUVJ 40-49 years, female 127.6
GTEX-1313W-0011-R11a-SM-5DUXN 50-59 years, female 127.5
GTEX-17EVP-0011-R11a-SM-7EWDL 40-49 years, male 126.7
GTEX-13O3O-0011-R11b-SM-5KM4G 60-69 years, female 126.5
GTEX-15EO6-0011-R11b-SM-6M47M 50-59 years, male 125.8
GTEX-1HSKV-0011-R11b-SM-AHZ2E 60-69 years, male 125.5
GTEX-13FXS-0011-R11a-SM-5L3DM 50-59 years, male 125.3
GTEX-11DZ1-0011-R11b-SM-DO11W 50-59 years, male 124.7
GTEX-1I1GS-0011-R11a-SM-C1YRU 60-69 years, male 124.5
GTEX-1LG7Y-0011-R11a-SM-EXOIH 50-59 years, male 124.1
GTEX-1KD4Q-0011-R11b-SM-EXOIE 40-49 years, male 123.7
GTEX-17HII-0011-R11b-SM-7KFSX 50-59 years, male 123.3
GTEX-1B933-0011-R11a-SM-7P8PM 50-59 years, female 123.3
GTEX-18465-0011-R11a-SM-72D78 50-59 years, male 122.7
GTEX-139TT-0011-R11b-SM-5LZV1 60-69 years, male 122.4
GTEX-11H98-0011-R11b-SM-5NQ6U 50-59 years, male 121.6
GTEX-1J8EW-0011-R11a-SM-AHZ37 60-69 years, female 121.3
GTEX-1LVAO-0011-R11b-SM-EXOI8 60-69 years, male 121.1
GTEX-1CB4G-0011-R11a-SM-9OSWG 60-69 years, male 120.3
GTEX-17HG3-0011-R11b-SM-7KFT4 30-39 years, female 119.9
GTEX-1IDJH-0011-R11b-SM-C1YRT 70-79 years, male 119.7
GTEX-WVLH-0011-R11A-SM-3MJFO 50-59 years, male 119.4
GTEX-14ASI-0011-R11b-SM-6AJBJ 60-69 years, male 119.1
GTEX-12WSF-0011-R11a-SM-5LZVT 70-79 years, male 118.6
GTEX-1HFI6-0011-R11b-SM-A96RU 40-49 years, male 118.3
GTEX-1IY9M-0011-R11b-SM-A96TI 60-69 years, male 118.0
GTEX-13X6K-0011-R11a-SM-5P9F5 60-69 years, female 117.3
GTEX-1I1GV-0011-R11a-SM-CJI3Z 60-69 years, male 117.1
GTEX-18464-0011-R11a-SM-72D76 50-59 years, male 116.7
GTEX-1N2EE-0011-R11b-SM-EXOIJ 60-69 years, male 116.6
GTEX-13VXU-0011-R11b-SM-5O9DJ 50-59 years, male 116.1
GTEX-X4XX-0011-R11A-SM-46MWQ 60-69 years, male 116.1
GTEX-ZUA1-0011-R11b-SM-51MTI 40-49 years, male 114.9
GTEX-13G51-0011-R11b-SM-5J2NE 60-69 years, male 114.6
GTEX-13S7M-0011-R11b-SM-5P9HU 60-69 years, female 114.6
GTEX-X4EP-0011-R11B-SM-4QASK 60-69 years, female 114.4
GTEX-1HB9E-0011-R11b-SM-ARU79 50-59 years, male 112.6
GTEX-11GSP-0011-R11b-SM-5NQ7V 60-69 years, female 112.2
GTEX-1AX9I-0011-R11b-SM-7DHN4 60-69 years, male 112.0
GTEX-1I1GQ-0011-R11b-SM-CKZPA 50-59 years, male 111.9
GTEX-YFC4-0011-R11a-SM-4SOK6 40-49 years, female 109.7
GTEX-1HCU6-0011-R11b-SM-AHZ2F 60-69 years, female 108.9
GTEX-13N2G-0011-R11a-SM-5MR3F 60-69 years, male 108.2
GTEX-14DAQ-0011-R11a-SM-664NO 60-69 years, female 108.0
GTEX-1GN73-0011-R11b-SM-9OSX4 60-69 years, male 107.9
GTEX-1F6I4-0011-R11b-SM-9OSWS 60-69 years, male 107.6
GTEX-1H1DG-0011-R11a-SM-C1YQK 70-79 years, male 106.7
GTEX-14ABY-0011-R11a-SM-5SI7C 50-59 years, male 105.7
GTEX-15DCD-0011-R11a-SM-D4P1R 70-79 years, female 105.4
GTEX-15CHQ-0011-R11b-SM-686ZZ 60-69 years, male 105.3
GTEX-TSE9-0011-R11A-SM-3DB7N 60-69 years, female 105.2
GTEX-13OVH-0011-R11b-SM-5KM4X 70-79 years, male 104.1
GTEX-1H1CY-0011-R11a-SM-C1YQR 60-69 years, female 102.0
GTEX-S7SE-0011-R11A-SM-2XCDD 50-59 years, male 101.8
GTEX-1EMGI-0011-R11b-SM-9OSWX 60-69 years, male 98.9
GTEX-1399T-0011-R11a-SM-5J2O1 60-69 years, male 98.3
GTEX-16GPK-0011-R11b-SM-7MKFF 60-69 years, male 98.3
Show allShow less
Brain - Cerebellum
Average nTPM: 148.8
Samples: 241

Max nTPM: 965.6
Min nTPM: 73.1
Std nTPM: 79.0
Median nTPM: 126.1
GTEX-1BAJH-3126-SM-7MGXY 70-79 years, male 965.6
GTEX-1GF9V-3026-SM-7P8R8 60-69 years, male 424.3
GTEX-1RNSC-3126-SM-EVR4V 60-69 years, male 385.4
GTEX-14PJO-2926-SM-686ZI 60-69 years, male 356.9
GTEX-16XZZ-2926-SM-6LPK4 60-69 years, male 352.6
GTEX-13JUV-3026-SM-5K7WX 40-49 years, female 348.1
GTEX-11GSO-3026-SM-5Q5AL 60-69 years, male 333.2
GTEX-ZVT3-2926-SM-5GU6M 60-69 years, female 308.2
GTEX-145MG-3126-SM-5Q5D3 50-59 years, male 304.4
GTEX-16Z82-2926-SM-6LPJJ 60-69 years, male 302.6
GTEX-ZF28-2926-SM-4WKG1 60-69 years, male 301.2
GTEX-Q2AG-2826-SM-2HMJQ 40-49 years, female 296.2
GTEX-WVLH-2926-SM-3MJG5 50-59 years, male 287.3
GTEX-18A6Q-2826-SM-7LTAO 60-69 years, male 281.4
GTEX-13OW6-2926-SM-5KM29 50-59 years, male 277.3
GTEX-11DYG-2926-SM-5H132 60-69 years, male 274.1
GTEX-1JJE9-3026-SM-CNNPA 70-79 years, male 271.4
GTEX-13OVJ-2726-SM-5IJG6 50-59 years, female 269.0
GTEX-ZYFD-2926-SM-5GID9 50-59 years, male 266.4
GTEX-NPJ8-2626-SM-2D7W2 40-49 years, male 258.3
GTEX-1E2YA-2926-SM-7MGWX 50-59 years, male 257.0
GTEX-1IL2V-3026-SM-CYPSA 70-79 years, male 244.8
GTEX-1GTWX-2926-SM-7MXV4 60-69 years, male 235.6
GTEX-PWO3-1026-SM-2I5F2 60-69 years, female 234.1
GTEX-1H1ZS-2926-SM-9WPP2 70-79 years, male 217.3
GTEX-WZTO-2826-SM-3NM8P 40-49 years, male 206.4
GTEX-1EWIQ-3026-SM-7IGOJ 70-79 years, female 205.5
GTEX-WWYW-3026-SM-3NB36 50-59 years, female 201.6
GTEX-14PN4-3026-SM-664O4 50-59 years, male 199.7
GTEX-P44G-2526-SM-2I5EK 30-39 years, male 198.4
GTEX-QMR6-1326-SM-32PLB 50-59 years, male 194.5
GTEX-1C6VR-3026-SM-7IGLW 60-69 years, male 193.9
GTEX-1H3VE-2826-SM-9WPOL 40-49 years, male 192.7
GTEX-1F52S-3026-SM-7P8PV 60-69 years, female 190.1
GTEX-1B8SG-1926-SM-73KUB 50-59 years, male 187.2
GTEX-14E6D-2926-SM-664OP 50-59 years, male 183.9
GTEX-1F48J-2726-SM-7P8PW 50-59 years, female 183.7
GTEX-NPJ7-2826-SM-2I3FU 60-69 years, female 183.6
GTEX-13X6J-2926-SM-7EPGP 50-59 years, male 183.1
GTEX-1KANB-3226-SM-D4P3G 50-59 years, male 181.8
GTEX-13PVQ-2926-SM-5L3HJ 50-59 years, male 181.2
GTEX-13OVL-3026-SM-5IJF1 50-59 years, male 180.5
GTEX-1A8G7-3026-SM-73KTT 60-69 years, male 178.9
GTEX-OHPN-2626-SM-2I5H1 60-69 years, female 177.3
GTEX-1F75A-2926-SM-7MXVN 50-59 years, male 176.8
GTEX-1E1VI-2926-SM-7IGLT 50-59 years, male 176.3
GTEX-Z93S-2826-SM-57WBL 50-59 years, male 175.5
GTEX-Y111-2826-SM-4TT3O 50-59 years, male 175.4
GTEX-12WSD-3026-SM-5LZU7 60-69 years, female 173.5
GTEX-1JN1M-3126-SM-AHZ4E 60-69 years, female 173.4
GTEX-1EKGG-3126-SM-9WPO5 60-69 years, male 171.6
GTEX-PVOW-2626-SM-32PL8 40-49 years, male 167.9
GTEX-1H3NZ-2926-SM-9WPQ8 60-69 years, male 167.7
GTEX-13OW5-3126-SM-5MR3Y 60-69 years, male 165.8
GTEX-1128S-2826-SM-5N9DI 60-69 years, female 164.5
GTEX-11PRG-2826-SM-5BC54 50-59 years, male 162.5
GTEX-1HSKV-2926-SM-B2LWJ 60-69 years, male 162.0
GTEX-1192X-3226-SM-5987D 50-59 years, male 160.9
GTEX-13N2G-3126-SM-5IJGL 60-69 years, male 160.5
GTEX-1C6WA-3326-SM-7MKGN 60-69 years, male 159.2
GTEX-11EI6-2926-SM-5985U 60-69 years, male 158.9
GTEX-ZAB4-2926-SM-57WCV 40-49 years, male 155.6
GTEX-QDT8-3026-SM-32PKB 30-39 years, female 154.8
GTEX-145LU-2626-SM-5LU9Z 50-59 years, male 154.4
GTEX-12WSC-2926-SM-5BC5Z 50-59 years, male 153.5
GTEX-RNOR-2226-SM-2TF5O 50-59 years, female 153.1
GTEX-14A5I-2826-SM-5SIBF 50-59 years, female 152.6
GTEX-13FHO-2926-SM-5L3ES 60-69 years, male 152.2
GTEX-1B996-2926-SM-7MXUH 60-69 years, male 152.0
GTEX-13O3Q-3026-SM-5IJGD 50-59 years, male 151.7
GTEX-17HHY-2926-SM-79OJW 50-59 years, male 148.7
GTEX-P44H-2426-SM-2XCEJ 40-49 years, male 148.4
GTEX-13OW7-2926-SM-5MR3Z 50-59 years, male 147.7
GTEX-11NV4-2226-SM-5BC4T 60-69 years, male 147.5
GTEX-N7MS-2526-SM-2D7W3 60-69 years, male 147.5
GTEX-1H3O1-1826-SM-A96TO 60-69 years, male 147.5
GTEX-1JMLX-3026-SM-EV79Q 50-59 years, male 146.7
GTEX-1RQEC-3026-SM-DPRXM 60-69 years, male 145.8
GTEX-11DXY-3126-SM-5N9BT 60-69 years, male 145.7
GTEX-X261-3126-SM-4PQZC 50-59 years, male 145.3
GTEX-1B933-3026-SM-731DB 50-59 years, female 144.9
GTEX-T2IS-2926-SM-32QPO 20-29 years, female 144.1
GTEX-1269C-3126-SM-5EGI6 60-69 years, female 143.6
GTEX-144GL-2926-SM-5O99F 50-59 years, male 143.0
GTEX-13FXS-3026-SM-5LZYO 50-59 years, male 142.9
GTEX-11ZUS-2826-SM-5EQKW 30-39 years, male 142.7
GTEX-1JJ6O-3026-SM-C1YQH 60-69 years, male 142.0
GTEX-1HSMO-2926-SM-C1YR5 60-69 years, male 141.2
GTEX-12126-0926-SM-5FQTW 20-29 years, male 140.9
GTEX-14E7W-2926-SM-5S2R8 70-79 years, male 140.9
GTEX-T5JC-2326-SM-32PMR 20-29 years, male 140.9
GTEX-1JMPZ-2826-SM-C1YRA 30-39 years, male 140.1
GTEX-13X6K-2826-SM-5O9DS 60-69 years, female 138.4
GTEX-ZDXO-2926-SM-4WKFM 60-69 years, male 138.0
GTEX-1EH9U-3126-SM-7MXU5 60-69 years, male 137.7
GTEX-1GZ4I-2926-SM-9JGGO 50-59 years, male 136.6
GTEX-16YQH-2926-SM-6LPJE 30-39 years, male 136.4
GTEX-11DXW-1026-SM-5H11K 40-49 years, male 136.3
GTEX-1I1HK-2726-SM-AHZ2M 60-69 years, male 135.7
GTEX-1CB4G-2926-SM-7MKFQ 60-69 years, male 135.2
GTEX-ZYY3-3026-SM-5GIEJ 60-69 years, female 134.8
GTEX-XMD1-2826-SM-4AT5F 60-69 years, male 134.5
GTEX-13NYB-3226-SM-5J2ND 40-49 years, male 134.2
GTEX-1JMQJ-3126-SM-EV79G 50-59 years, male 133.2
GTEX-ZZPT-2926-SM-5EQ5S 50-59 years, male 132.6
GTEX-WL46-2826-SM-3LK81 50-59 years, male 132.5
GTEX-17HII-2926-SM-79OMK 50-59 years, male 131.9
GTEX-132Q8-2926-SM-5IFFP 60-69 years, male 131.7
GTEX-1HCVE-2926-SM-9WPPJ 50-59 years, male 131.4
GTEX-1KWVE-2226-SM-CXZKN 30-39 years, male 131.1
GTEX-12ZZZ-3126-SM-5LZU6 60-69 years, male 130.6
GTEX-13CF2-3026-SM-5IFFX 60-69 years, male 130.6
GTEX-1HB9E-3126-SM-AHZ4M 50-59 years, male 130.3
GTEX-17JCI-3026-SM-7EWDR 60-69 years, female 129.4
GTEX-N7MT-1226-SM-DKPOK 60-69 years, female 129.2
GTEX-1GZ2Q-3026-SM-9JGG3 40-49 years, male 128.6
GTEX-15SHU-3026-SM-6LPIB 40-49 years, female 128.5
GTEX-1H1CY-3026-SM-9OSW7 60-69 years, female 127.9
GTEX-1A8G6-3126-SM-731D8 60-69 years, male 127.6
GTEX-13JVG-3226-SM-5IJGJ 60-69 years, male 127.5
GTEX-13RTJ-3126-SM-5S2Q4 60-69 years, male 126.1
GTEX-T6MN-2526-SM-32PMN 50-59 years, male 125.6
GTEX-1H4P4-2726-SM-9JGGB 50-59 years, male 125.4
GTEX-1IKOH-2826-SM-CNNRC 60-69 years, female 124.9
GTEX-UTHO-2926-SM-3P5Z9 60-69 years, male 124.3
GTEX-1EX96-3126-SM-9JGGC 50-59 years, male 124.1
GTEX-13FHP-2926-SM-5IJG9 50-59 years, male 123.7
GTEX-11DZ1-2926-SM-5A5KI 50-59 years, male 123.6
GTEX-1F6I4-3026-SM-7P8SI 60-69 years, male 123.4
GTEX-1KD4Q-3026-SM-EV7A7 40-49 years, male 122.7
GTEX-1JMQK-2926-SM-D4P2T 60-69 years, male 122.6
GTEX-QVJO-1325-SM-2S1QX 60-69 years, female 122.3
GTEX-ZAK1-2926-SM-5HL9S 50-59 years, female 122.3
GTEX-1CB4H-3026-SM-79OLX 60-69 years, female 122.2
GTEX-13O3O-3026-SM-5KM42 60-69 years, female 121.8
GTEX-17EVQ-2726-SM-7EWDT 70-79 years, male 121.3
GTEX-14BIN-3326-SM-5Q5E6 50-59 years, female 121.1
GTEX-WHSE-2926-SM-3NMBG 20-29 years, male 121.1
GTEX-13SLX-3226-SM-5YYA6 50-59 years, female 121.0
GTEX-145MH-2926-SM-5Q5D2 50-59 years, male 120.8
GTEX-RU72-2926-SM-2TF66 50-59 years, female 120.8
GTEX-1LSVX-2826-SM-EVR58 60-69 years, male 120.8
GTEX-1313W-3026-SM-5LZUZ 50-59 years, female 120.7
GTEX-QVUS-2926-SM-3GIJB 60-69 years, female 120.7
GTEX-12WSM-2126-SM-5GCOC 60-69 years, male 120.3
GTEX-131XH-2926-SM-5LZU4 50-59 years, male 119.9
GTEX-139TS-3126-SM-5LZWX 60-69 years, male 119.9
GTEX-15G19-2826-SM-6M48K 60-69 years, male 119.9
GTEX-11O72-2826-SM-5HL6W 40-49 years, male 119.8
GTEX-YFC4-3026-SM-5IFJK 40-49 years, female 119.7
GTEX-1GZHY-3026-SM-7MXVA 50-59 years, female 119.6
GTEX-13OW8-2926-SM-5L3FV 60-69 years, male 119.0
GTEX-1HBPI-2726-SM-9WPPF 50-59 years, male 118.8
GTEX-14BMV-2926-SM-5TDEE 50-59 years, male 118.5
GTEX-1LG7Y-3126-SM-EV7AS 50-59 years, male 118.4
GTEX-1PIIG-2826-SM-DTX7O 30-39 years, male 118.3
GTEX-1C64N-3126-SM-79OO3 50-59 years, male 117.8
GTEX-1P4AB-3026-SM-EXOJS 50-59 years, male 117.7
GTEX-117XS-3126-SM-5GIDP 60-69 years, male 117.3
GTEX-11ZVC-3026-SM-59HJM 50-59 years, female 117.1
GTEX-14JFF-2826-SM-6871Q 60-69 years, male 116.8
GTEX-1B8L1-3226-SM-7P8OX 60-69 years, male 115.5
GTEX-1J1OQ-3126-SM-D4P2O 40-49 years, female 115.4
GTEX-1JMOU-2826-SM-EV79R 60-69 years, female 115.1
GTEX-1H1DG-2826-SM-9JGHB 70-79 years, male 115.0
GTEX-1POEN-2726-SM-E9U6B 30-39 years, female 114.3
GTEX-17EVP-2926-SM-793BU 40-49 years, male 114.2
GTEX-17F97-2926-SM-7DUEQ 50-59 years, male 113.9
GTEX-1QEPI-3026-SM-EXOIW 60-69 years, female 113.9
GTEX-12ZZX-2826-SM-5BC6K 40-49 years, female 113.4
GTEX-139TT-2626-SM-5LZUB 60-69 years, male 113.4
GTEX-14C39-3026-SM-5S2QE 40-49 years, male 113.3
GTEX-11OC5-0626-SM-5HL6M 60-69 years, male 112.9
GTEX-1QP6S-3026-SM-EAZ4N 40-49 years, male 112.7
GTEX-1B8SF-3026-SM-731DX 60-69 years, male 112.3
GTEX-145MF-2826-SM-7EPGU 50-59 years, male 112.0
GTEX-15DYW-3026-SM-7KFRM 60-69 years, female 110.8
GTEX-X4XX-2926-SM-3NMB1 60-69 years, male 109.5
GTEX-147GR-3126-SM-5S2PM 60-69 years, male 108.7
GTEX-14JG1-2926-SM-686ZK 40-49 years, male 108.6
GTEX-13112-2926-SM-5DUWT 50-59 years, male 107.7
GTEX-14ASI-2926-SM-5Q5DG 60-69 years, male 107.6
GTEX-YJ89-2926-SM-5P9IT 60-69 years, male 107.3
GTEX-145LS-3026-SM-5O99S 60-69 years, female 106.9
GTEX-183WM-2726-SM-7KFRF 70-79 years, female 106.6
GTEX-1F6IF-3026-SM-7P8QN 60-69 years, male 106.4
GTEX-11ONC-3026-SM-5985W 60-69 years, male 106.3
GTEX-11EMC-3326-SM-5P9JH 60-69 years, female 106.2
GTEX-1PWST-3026-SM-EAZ3H 70-79 years, male 105.7
GTEX-ZAJG-3026-SM-5HL92 50-59 years, female 105.0
GTEX-12WSE-2926-SM-5RQJ9 20-29 years, male 104.9
GTEX-13X6I-2926-SM-5Q5C3 60-69 years, male 104.7
GTEX-Y8DK-0726-SM-4TT3S 60-69 years, male 104.4
GTEX-1RDX4-3226-SM-DPS14 50-59 years, female 104.4
GTEX-14DAQ-3026-SM-5S2QZ 60-69 years, female 104.3
GTEX-13VXU-3026-SM-5LU3K 50-59 years, male 103.6
GTEX-11NUK-3026-SM-5986K 50-59 years, male 102.9
GTEX-S7SE-2526-SM-2XCDL 50-59 years, male 102.9
GTEX-12WSH-3126-SM-5LZW8 50-59 years, male 102.4
GTEX-12ZZY-2926-SM-5DUXO 60-69 years, male 102.2
GTEX-14BIM-3126-SM-5Q5C7 60-69 years, female 102.2
GTEX-15ER7-3026-SM-6M47W 20-29 years, female 102.2
GTEX-1EMGI-3126-SM-7MXUR 60-69 years, male 102.0
GTEX-1I1GV-3026-SM-CNNR9 60-69 years, male 101.7
GTEX-14PJM-3026-SM-6LLHM 50-59 years, female 101.1
GTEX-11ZTS-3226-SM-5EGID 60-69 years, female 101.0
GTEX-14JIY-2326-SM-6AJAJ 60-69 years, male 100.1
GTEX-1F75W-3126-SM-7P8SJ 60-69 years, male 100.1
GTEX-14C5O-2926-SM-5RQI1 60-69 years, male 99.7
GTEX-17HG3-2826-SM-7EPGO 30-39 years, female 99.5
GTEX-15EO6-2926-SM-6M48D 50-59 years, male 98.7
GTEX-1A3MX-2926-SM-718B7 60-69 years, male 98.6
GTEX-14ABY-3026-SM-664NE 50-59 years, male 98.5
GTEX-111FC-3326-SM-5GZYV 60-69 years, male 97.4
GTEX-1GN73-3026-SM-7MXV8 60-69 years, male 97.0
GTEX-1MJK2-3026-SM-EV7A5 50-59 years, male 96.6
GTEX-ZUA1-2926-SM-59HL3 40-49 years, male 95.9
GTEX-147F4-3026-SM-5Q5BJ 50-59 years, male 95.0
GTEX-13S7M-3026-SM-5S2QQ 60-69 years, female 94.9
GTEX-1EU9M-2926-SM-793DF 60-69 years, male 94.9
GTEX-1IY9M-3126-SM-AHZ3A 60-69 years, male 94.8
GTEX-X4EP-3026-SM-3P5YP 60-69 years, female 94.4
GTEX-XLM4-2926-SM-4AT59 60-69 years, male 94.3
GTEX-13G51-3126-SM-5IJG7 60-69 years, male 94.1
GTEX-11TTK-2826-SM-5GU5K 60-69 years, female 93.9
GTEX-1399T-3126-SM-5IJFS 60-69 years, male 93.9
GTEX-18465-2926-SM-7KFSE 50-59 years, male 93.7
GTEX-1R9PO-2826-SM-E6CPV 60-69 years, female 93.4
GTEX-13QIC-3026-SM-5LU58 60-69 years, female 92.2
GTEX-1IDJH-3126-SM-C1YQS 70-79 years, male 91.2
GTEX-1NV8Z-3026-SM-DTX8Z 60-69 years, male 91.2
GTEX-1JJEA-2926-SM-C1YSK 60-69 years, male 90.7
GTEX-1R46S-3126-SM-DPRZ9 60-69 years, female 90.3
GTEX-131YS-3026-SM-5EGHY 60-69 years, female 90.2
GTEX-11GSP-3126-SM-5A5LL 60-69 years, female 90.1
GTEX-1HBPH-3026-SM-9WPNY 40-49 years, female 88.9
GTEX-R55E-2526-SM-2TC6H 20-29 years, male 87.5
GTEX-13OVH-2926-SM-5IJFH 70-79 years, male 85.7
GTEX-1I1CD-2926-SM-A96SJ 60-69 years, female 85.5
GTEX-TSE9-2926-SM-3DB77 60-69 years, female 84.3
GTEX-1GF9W-2726-SM-9JGGW 60-69 years, male 73.1
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CEREBELLUM - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

260.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Cerebellum
Scaled Tags Per Million: 260.3
FF:10083-102B2 22-68 years, mixed 309.6
FF:10166-103B4 76 years, female 211.1

CEREBELLUM - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

117.5
Pig sample Sample description nTPM
Cerebellum
nTPM: 117.5
Samples: 4

Max nTPM: 132.5
Min nTPM: 94.7
Sample A Female 132.5
Sample B Female 126.8
Sample C Male 94.7
Sample D Male 116.1

CEREBELLUM - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

47.1
Mouse sample Sample description nTPM
Cerebellum
nTPM: 47.1
Samples: 4

Max nTPM: 48.0
Min nTPM: 46.3
Sample A Male 46.3
Sample B Male 47.1
Sample C Female 48.0
Sample D Female 47.1

CEREBELLUM - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.8
Allen experiment id Experiment description Expression energy
Cerebellum
Expression energy: 0.8
68845502 Antisense, RP_050224_01_H07, Mouse strain C57BL/6J (56 days, male) 1.1
71587888 Antisense, RP_050725_03_G01, Mouse strain C57BL/6J (56 days, male) 0.5

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