PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:1413.5 nTPM
FANTOM5:878.8 Scaled Tags Per Million
Pig:208.8 nTPM
Mouse:51.0 nTPM
Allen mouse:1.4 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 1413.5
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 1136.4
2188 Female, age 91, both hemispheres 1627.1
2301 Female, age 85, both hemispheres 1159.6
2090 Male, age 80, both hemispheres 1138.8
1984 Male, age 76, both hemispheres 620.0
Area postrema
nTPM: 1207.5
2799 Male, age 61, both hemispheres 2004.2
2306 Male, age 80, both hemispheres 1059.2
2054 Male, age 76, both hemispheres 559.2
Dorsal cochlear nucleus
nTPM: 1142.1
2802 Male, age 74, right hemisphere 1375.1
2378 Male, age 80, both hemispheres 1225.5
2370 Male, age 61, both hemispheres 1175.0
2187 Female, age 91, both hemispheres 1123.7
2058 Male, age 76, both hemispheres 811.1
Dorsal medullary reticular nucleus
nTPM: 1110.8
2373 Male, age 61, both hemispheres 1251.2
2088 Male, age 76, both hemispheres 1116.8
2040 Female, age 85, both hemispheres 964.5
Dorsal motor vagal complex
nTPM: 1172.4
2797 Male, age 61, both hemispheres 3048.1
2807 Female, age 85, both hemispheres 1293.1
2643 Male, age 74, both hemispheres 1188.8
2185 Male, age 76, both hemispheres 1032.9
2133 Female, age 91, both hemispheres 820.5
2844 Male, age 55, unknown 764.2
2000 Male, age 74, unknown 721.2
2813 Female, age 72, unknown 510.4
Dorsal tegmental nucleus
nTPM: 941.4
2083 Male, age 80, both hemispheres 1130.2
2326 Male, age 74, both hemispheres 1087.8
1936 Male, age 76, left hemisphere 858.5
2358 Male, age 61, both hemispheres 688.9
Dorsolateral tegmental area
nTPM: 863.3
2654 Male, age 80, both hemispheres 1248.0
2751 Female, age 85, both hemispheres 1021.1
2337 Male, age 61, both hemispheres 912.1
2360 Male, age 74, both hemispheres 701.1
2141 Male, age 76, both hemispheres 434.0
Gigantocellular reticular nuclei, medullary
nTPM: 1019.7
2387 Female, age 91, both hemispheres 1587.8
2314 Male, age 61, both hemispheres 1215.2
2310 Male, age 80, both hemispheres 1045.7
1876 Female, age 85, both hemispheres 923.1
2022 Male, age 76, right hemisphere 723.4
2462 Male, age 74, both hemispheres 623.2
Gigantocellular reticular nuclei, pars
nTPM: 1069.0
2706 Male, age 80, both hemispheres 1276.6
2330 Male, age 80, both hemispheres 1247.1
2336 Male, age 61, both hemispheres 1016.6
2084 Female, age 85, both hemispheres 997.6
2168 Male, age 76, both hemispheres 807.1
Inferior olive
nTPM: 1067.2
2379 Male, age 80, both hemispheres 1406.0
2628 Female, age 91, both hemispheres 1177.9
2085 Female, age 85, both hemispheres 1058.6
2178 Male, age 61, both hemispheres 929.9
2563 Male, age 74, both hemispheres 763.8
Kolliker-Fuse nucleus
nTPM: 1045.0
2793 Female, age 91, left hemisphere 1522.8
2163 Male, age 80, both hemispheres 960.1
2315 Male, age 76, right hemisphere 652.1
Lateral lemniscal nuclei
nTPM: 987.3
2320 Female, age 91, left hemisphere 1265.4
2036 Male, age 80, both hemispheres 1073.1
2453 Male, age 74, right hemisphere 943.7
2169 Male, age 76, both hemispheres 908.2
2746 Female, age 85, left hemisphere 746.1
Lateral medullary reticular nucleus
nTPM: 992.9
2852 Male, age 80, both hemispheres 1127.3
2804 Female, age 91, both hemispheres 1108.9
2190 Female, age 85, both hemispheres 1060.9
2374 Male, age 61, both hemispheres 977.7
2044 Male, age 76, both hemispheres 907.7
2305 Male, age 74, both hemispheres 774.7
Lateral parabrachial nucleus
nTPM: 1028.5
2792 Male, age 76, both hemispheres 1637.6
2013 Male, age 80, both hemispheres 951.3
2790 Male, age 61, both hemispheres 901.3
2139 Female, age 85, right hemisphere 623.9
Lateral vestibular nucleus
nTPM: 950.2
2311 Male, age 80, both hemispheres 1039.4
2184 Male, age 76, both hemispheres 861.0
Locus coeruleus
nTPM: 511.5
2720 Male, age 74, both hemispheres 796.1
2162 Male, age 80, both hemispheres 600.6
2317 Female, age 72, unknown 489.4
2014 Male, age 55, unknown 486.0
2123 Female, age 91, both hemispheres 451.2
2788 Male, age 74, unknown 438.0
1980 Male, age 76, both hemispheres 319.6
Medial olivary nucleus
nTPM: 1143.4
1962 Male, age 76, both hemispheres 1453.0
2138 Female, age 91, both hemispheres 1143.2
1943 Male, age 61, both hemispheres 1060.4
2851 Male, age 80, both hemispheres 917.1
Medial parabrachial nucleus
nTPM: 971.3
2170 Female, age 91, both hemispheres 1105.0
2463 Female, age 85, right hemisphere 1018.4
2156 Male, age 61, both hemispheres 947.1
2786 Male, age 76, both hemispheres 918.5
2854 Male, age 80, both hemispheres 867.2
Medial periolivary nuclei
nTPM: 957.7
2458 Female, age 91, both hemispheres 1359.9
2081 Male, age 80, both hemispheres 1110.6
2063 Male, age 76, both hemispheres 912.5
2171 Female, age 85, both hemispheres 721.0
2791 Male, age 74, right hemisphere 684.5
Medial vestibular nucleus
nTPM: 846.2
2803 Female, age 91, both hemispheres 1270.1
2093 Male, age 80, both hemispheres 1107.5
2624 Male, age 61, both hemispheres 892.5
2801 Male, age 74, both hemispheres 715.4
2743 Female, age 85, both hemispheres 627.5
2134 Male, age 76, both hemispheres 464.2
Motor facial nucleus
nTPM: 1021.5
2795 Female, age 91, both hemispheres 1279.9
2697 Female, age 85, both hemispheres 1234.6
2327 Male, age 80, both hemispheres 1051.1
2126 Male, age 61, both hemispheres 1035.8
2062 Male, age 76, both hemispheres 819.4
2365 Male, age 74, right hemisphere 708.2
Motor hypoglossal nucleus
nTPM: 948.3
2132 Female, age 85, both hemispheres 1316.7
2182 Male, age 80, both hemispheres 1135.8
2125 Female, age 91, both hemispheres 1105.8
2461 Male, age 61, both hemispheres 738.1
2277 Male, age 76, both hemispheres 445.2
Motor trigeminal nucleus
nTPM: 1099.1
2321 Female, age 91, both hemispheres 1382.1
2309 Male, age 76, both hemispheres 1088.1
2079 Male, age 80, both hemispheres 1057.2
2560 Male, age 74, both hemispheres 1043.6
2335 Male, age 61, both hemispheres 924.4
Nuclei of the trapezoid body
nTPM: 1022.9
2368 Female, age 91, both hemispheres 1378.0
2166 Male, age 80, both hemispheres 1290.1
2159 Male, age 61, both hemispheres 892.0
1983 Male, age 76, both hemispheres 863.7
2735 Female, age 85, both hemispheres 690.7
Nucleus ambiguus
nTPM: 1079.7
2071 Male, age 76, both hemispheres 1332.6
2096 Female, age 85, both hemispheres 826.8
Nucleus cuneatus
nTPM: 1413.5
2805 Female, age 91, both hemispheres 2137.1
2380 Male, age 80, both hemispheres 1681.8
2808 Female, age 85, both hemispheres 1487.9
2381 Male, age 80, both hemispheres 1450.4
2376 Male, age 61, both hemispheres 1343.0
2562 Male, age 61, both hemispheres 1301.5
2564 Male, age 74, both hemispheres 1274.4
2100 Male, age 76, both hemispheres 1197.5
2131 Male, age 76, both hemispheres 847.9
Nucleus gracilis
nTPM: 1366.9
2382 Male, age 80, both hemispheres 1619.4
2299 Female, age 85, both hemispheres 1440.6
2627 Male, age 74, both hemispheres 1040.8
Nucleus raphe magnus
nTPM: 869.3
2459 Female, age 91, both hemispheres 1323.8
2328 Male, age 80, both hemispheres 1081.4
2051 Male, age 76, both hemispheres 917.2
2455 Male, age 74, both hemispheres 714.5
2172 Female, age 85, both hemispheres 622.3
2160 Male, age 61, both hemispheres 556.4
Nucleus raphe obscurus
nTPM: 1264.0
2142 Male, age 76, midline 1368.4
2845 Female, age 85, midline 1281.8
2800 Male, age 61, midline 1141.7
Nucleus raphe pallidus
nTPM: 1062.3
2145 Male, age 76, midline 1615.0
2183 Male, age 80, midline 822.4
1924 Male, age 61, midline 749.4
Nucleus tractus solitarii
nTPM: 611.2
2191 Female, age 85, both hemispheres 701.6
2307 Male, age 80, both hemispheres 626.9
2144 Female, age 91, right hemisphere 610.2
2656 Male, age 76, both hemispheres 505.9
Paramedian reticular nucleus
nTPM: 1016.8
2052 Male, age 76, both hemispheres 1307.7
2057 Male, age 80, both hemispheres 998.0
2313 Male, age 61, both hemispheres 928.4
2050 Female, age 85, both hemispheres 833.1
Parvicellular reticular nuclei
nTPM: 1034.8
2095 Male, age 76, both hemispheres 1185.9
2558 Male, age 74, both hemispheres 992.7
2119 Male, age 80, both hemispheres 925.8
Parvicellular reticular nuclei, medullary
nTPM: 889.7
2181 Male, age 80, left hemisphere 946.3
2189 Female, age 91, both hemispheres 921.9
2091 Female, age 85, both hemispheres 801.0
Pedunculopontine tegmental nucleus
nTPM: 795.1
2334 Male, age 80, both hemispheres 918.1
2338 Male, age 61, both hemispheres 823.2
1921 Female, age 85, both hemispheres 644.1
Peritrigeminal nucleus
nTPM: 882.6
2136 Male, age 76, both hemispheres 1035.7
2067 Female, age 85, both hemispheres 824.5
2179 Male, age 61, both hemispheres 787.6
Pontine nuclei
nTPM: 1002.7
2319 Female, age 91, both hemispheres 1474.2
1968 Male, age 76, left hemisphere 1213.9
2115 Male, age 80, left hemisphere 1140.7
2454 Male, age 74, left hemisphere 997.1
2109 Female, age 72, unknown 887.6
1863 Male, age 55, unknown 886.0
2787 Female, age 85, both hemispheres 725.3
2727 Male, age 61, right hemisphere 696.7
Pontine raphe nucleus
nTPM: 683.4
2122 Female, age 85, midline 819.3
2853 Male, age 76, midline 547.5
Posteroventral cochlear nucleus
nTPM: 1380.2
2135 Female, age 91, both hemispheres 1842.6
2341 Male, age 80, both hemispheres 1757.9
2371 Male, age 61, both hemispheres 1462.8
2070 Male, age 76, both hemispheres 921.5
2752 Female, age 85, both hemispheres 915.9
Prepositus hypoglossal nucleus
nTPM: 791.9
2855 Female, age 85, right hemisphere 978.9
2086 Male, age 80, both hemispheres 604.9
Principal sensory trigeminal nucleus
nTPM: 894.2
2367 Female, age 91, left hemisphere 1241.4
2324 Male, age 76, both hemispheres 841.1
2008 Male, age 80, left hemisphere 796.1
2158 Male, age 61, both hemispheres 698.0
Reticular pontine nucleus, caudal
nTPM: 1167.9
2457 Female, age 91, both hemispheres 1476.1
2092 Male, age 76, both hemispheres 1092.2
2559 Male, age 74, both hemispheres 1092.2
2332 Male, age 80, right hemisphere 1011.2
Reticular pontine nucleus, oral
nTPM: 1009.7
2366 Female, age 91, both hemispheres 1631.4
1939 Male, age 80, both hemispheres 941.5
2012 Female, age 85, both hemispheres 846.2
2167 Male, age 76, both hemispheres 818.1
2361 Male, age 74, both hemispheres 811.1
Reticulotegmental nucleus
nTPM: 1136.3
2322 Female, age 91, both hemispheres 1357.3
2452 Male, age 74, both hemispheres 1272.1
2333 Male, age 80, both hemispheres 1139.4
2325 Male, age 76, both hemispheres 776.6
Spinal trigeminal nucleus, caudal
nTPM: 1013.7
2308 Male, age 80, both hemispheres 1252.9
2312 Male, age 61, both hemispheres 995.9
2642 Male, age 74, both hemispheres 953.9
2390 Female, age 91, both hemispheres 933.0
2447 Male, age 76, both hemispheres 932.8
Spinal trigeminal nucleus, interpolar
nTPM: 914.6
2389 Female, age 91, both hemispheres 1102.9
2033 Male, age 80, both hemispheres 1071.7
2386 Female, age 85, both hemispheres 931.6
2625 Male, age 61, both hemispheres 797.6
2066 Male, age 76, right hemisphere 669.4
Spinal trigeminal nucleus, oral
nTPM: 836.4
2164 Male, age 80, both hemispheres 1091.7
1978 Male, age 76, both hemispheres 755.6
2737 Female, age 85, both hemispheres 662.0
Spinal vestibular nucleus
nTPM: 1246.5
2384 Male, age 74, both hemispheres 1784.3
2806 Female, age 85, both hemispheres 1245.0
2796 Male, age 61, both hemispheres 1210.9
2186 Female, age 91, both hemispheres 1085.0
2748 Male, age 76, both hemispheres 1084.5
2780 Male, age 80, both hemispheres 1069.2
Subcoeruleus area
nTPM: 975.9
2369 Female, age 85, left hemisphere 1196.5
2451 Male, age 74, both hemispheres 1169.1
2089 Male, age 76, left hemisphere 996.0
1958 Male, age 80, both hemispheres 847.8
2323 Female, age 91, left hemisphere 670.1
Superior olive
nTPM: 1126.1
2020 Male, age 76, both hemispheres 1588.9
2561 Female, age 91, both hemispheres 1407.8
2329 Male, age 80, right hemisphere 1149.6
1875 Female, age 85, both hemispheres 829.3
2364 Male, age 74, right hemisphere 655.0
Superior vestibular nucleus
nTPM: 753.5
2015 Male, age 80, both hemispheres 934.9
2383 Male, age 74, both hemispheres 674.3
2061 Male, age 76, both hemispheres 651.4
Ventral medullary reticular nucleus
nTPM: 1104.1
2372 Male, age 61, both hemispheres 1215.1
2060 Male, age 76, both hemispheres 993.2
Ventral periolivary nuclei
nTPM: 1103.1
2023 Male, age 76, both hemispheres 1530.5
2794 Female, age 91, left hemisphere 1332.4
2165 Male, age 80, both hemispheres 954.0
2130 Female, age 85, both hemispheres 595.4
Ventrolateral medulla, A1-C1 cell groups
nTPM: 1015.3
2118 Male, age 80, both hemispheres 1275.7
2302 Female, age 91, both hemispheres 1199.0
1986 Male, age 76, both hemispheres 913.3
2741 Female, age 85, both hemispheres 857.1
2180 Male, age 61, both hemispheres 831.5
Ventrolateral tegmental area, A5 NE cell group
nTPM: 945.1
2456 Female, age 91, both hemispheres 1357.6
1959 Male, age 76, both hemispheres 1041.3
2161 Male, age 80, both hemispheres 1009.7
2840 Female, age 85, both hemispheres 801.7
2359 Male, age 61, both hemispheres 732.9
2449 Male, age 74, both hemispheres 727.6

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 878.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 816.0
FF:10182-103D2 60 years, female 1080.0
FF:10165-103B3 76 years, female 552.1
Medulla oblongata
Scaled Tags Per Million: 692.1
FF:10038-101F2 18-64 years, mixed 952.6
FF:10155-103A2 76 years, female 573.4
FF:10174-103C3 60 years, female 550.3
Pons
Scaled Tags Per Million: 878.8
FF:10033-101E6 18-54 years, mixed 878.8

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 208.8
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 208.8
Samples: 4

Max nTPM: 236.8
Min nTPM: 193.8
Sample A Female 193.8
Sample B Female 202.7
Sample C Male 236.8
Sample D Male 201.7
Pons
nTPM: 195.3
Samples: 4

Max nTPM: 224.9
Min nTPM: 169.1
Sample A Female 169.1
Sample B Female 169.9
Sample C Male 224.9
Sample D Male 217.3

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 51.0
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 51.0
Samples: 4

Max nTPM: 52.2
Min nTPM: 50.3
Sample A Male 50.5
Sample B Male 52.2
Sample C Female 50.9
Sample D Female 50.3

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 1.4
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 1.4
71587888 Antisense, RP_050725_03_G01, Mouse strain C57BL/6J (56 days, male) 1.8
68845502 Antisense, RP_050224_01_H07, Mouse strain C57BL/6J (56 days, male) 1.1
Pons
Expression energy: 1.4
71587888 Antisense, RP_050725_03_G01, Mouse strain C57BL/6J (56 days, male) 1.7
68845502 Antisense, RP_050224_01_H07, Mouse strain C57BL/6J (56 days, male) 1.2

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