We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
MT-CO3
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • MT-CO3
BRAIN CEREBELLUM Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Cerebellum
CEREBELLUM - Expression summary
Protein expression
Cerebellumi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Cells in granular layer: Not detected
Cells in molecular layer: Medium
Purkinje cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:34917.1 nTPM
HPA Brain:27855.4 nTPM
GTEx:34917.1 nTPM
Pig:22801.0 nTPM
Mouse:28780.5 nTPM
Allen mouse:15.1 Expression energy

CEREBELLUM - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA042788
Purkinje cells Medium
Cells in granular layer Not detected
Cells in molecular layer Medium



CEREBELLUM - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

27855.4
Sample id Sample description nTPM
Cerebellar cortex
nTPM: 20527.3
1769 Male, age 76, right hemisphere 45209.7
1774 Male, age 80, left hemisphere 25757.2
1768 Female, age 72, unknown 23336.2
2055 Female, age 91, right hemisphere 21963.7
2003 Female, age 85, right hemisphere 18786.2
2006 Male, age 61, right hemisphere 11767.3
1788 Male, age 55, unknown 9609.7
2101 Male, age 74, right hemisphere 7788.6
Cerebellar nuclei
nTPM: 23178.9
2882 Male, age 76, left hemisphere 54753.9
2177 Female, age 85, both hemispheres 32793.4
2005 Male, age 80, left hemisphere 22461.8
1871 Male, age 74, unknown 21683.7
1879 Male, age 55, unknown 18687.9
2175 Male, age 61, right hemisphere 16835.7
1966 Female, age 91, left hemisphere 16044.3
2783 Female, age 72, unknown 15574.1
2318 Male, age 74, left hemisphere 9775.1
Flocculonodular lobe
nTPM: 26176.7
1767 Male, age 76, left hemisphere 44004.8
1771 Male, age 80, left hemisphere 33426.9
1765 Male, age 55, unknown 33367.5
2176 Female, age 91, right hemisphere 26510.5
1792 Male, age 74, unknown 18803.6
1835 Female, age 85, right hemisphere 16461.9
2004 Male, age 61, right hemisphere 10661.3
Vermis
nTPM: 27855.4
1770 Male, age 76, left hemisphere 57466.2
1766 Male, age 55, unknown 46723.5
1778 Female, age 91, left hemisphere 40080.4
2834 Male, age 80, left hemisphere 27125.2
1825 Male, age 74, unknown 21544.1
1751 Male, age 74, right hemisphere 19257.6
1988 Female, age 85, left hemisphere 16225.4
2460 Male, age 61, both hemispheres 12086.7
1928 Female, age 72, unknown 10189.8

CEREBELLUM - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

34917.1
GTEx sample id Sample description nTPM
Brain - Cerebellar Hemisphere
Average nTPM: 34917.1
Samples: 215

Max nTPM: 255855.8
Min nTPM: 4745.9
Std nTPM: 35381.8
Median nTPM: 23374.9
GTEX-131XW-0011-R11a-SM-5DUV9 50-59 years, female 255855.8
GTEX-1CAV2-0011-R11a-SM-ARU8D 40-49 years, female 206774.7
GTEX-139UW-0011-R11a-SM-5IJGN 60-69 years, male 197068.5
GTEX-1LKK1-0011-R11a-SM-EXOIG 50-59 years, female 179607.9
GTEX-16NPV-0011-R11a-SM-7IGMK 50-59 years, female 162581.2
GTEX-1J8Q2-0011-R11a-SM-A9SKI 60-69 years, male 152837.6
GTEX-1IOXB-0011-R11a-SM-A9G1X 50-59 years, male 149597.5
GTEX-ZF28-0011-R11a-SM-4WWEI 60-69 years, male 131520.8
GTEX-OHPN-0011-R11A-SM-2I5FM 60-69 years, female 124424.5
GTEX-13CZV-0011-R11b-SM-5N9FN 60-69 years, male 109802.7
GTEX-14C39-0011-R11b-SM-5YYAF 40-49 years, male 104745.6
GTEX-16XZZ-0011-R11a-SM-7EPI3 60-69 years, male 103638.8
GTEX-13PLJ-0011-R11b-SM-5O9BS 60-69 years, female 99338.0
GTEX-16Z82-0011-R11a-SM-79OKJ 60-69 years, male 92063.3
GTEX-1HUB1-0011-R11b-SM-CE6SC 60-69 years, male 91616.6
GTEX-1B8SG-0011-R11a-SM-7P8PF 50-59 years, male 90513.3
GTEX-1GZHY-0011-R11a-SM-C1YRQ 50-59 years, female 82965.2
GTEX-17EVQ-0011-R11a-SM-7LT9C 70-79 years, male 82082.8
GTEX-ZE9C-0011-R11a-SM-4WKGG 60-69 years, male 73284.4
GTEX-11EI6-0011-R11a-SM-DO11V 60-69 years, male 70989.5
GTEX-13PVQ-0011-R11a-SM-5O9DU 50-59 years, male 70160.8
GTEX-13NZA-0011-R11b-SM-5KM4W 60-69 years, male 65001.7
GTEX-13QIC-0011-R11b-SM-5O9BU 60-69 years, female 61523.9
GTEX-1H4P4-0011-R11b-SM-CE6S8 50-59 years, male 59611.1
GTEX-1BAJH-0011-R11b-SM-7IGLM 70-79 years, male 57841.1
GTEX-11EMC-0011-R11b-SM-DNZZK 60-69 years, female 57291.3
GTEX-ZVT3-0011-R11b-SM-57WBI 60-69 years, female 56354.7
GTEX-1JMOU-0011-R11b-SM-EXUTA 60-69 years, female 55389.2
GTEX-1IKOH-0011-R11a-SM-AHZ38 60-69 years, female 53256.2
GTEX-1M4P7-0011-R11b-SM-EXOIK 60-69 years, male 52380.6
GTEX-11WQC-0011-R11b-SM-57WD6 60-69 years, male 52023.9
GTEX-12WSD-0011-R11a-SM-9OSVC 60-69 years, female 49341.4
GTEX-1R9K4-0011-R11a-SM-EZ6N9 60-69 years, male 49059.1
GTEX-183WM-0011-R11a-SM-718A5 70-79 years, female 48609.8
GTEX-1C64N-0011-R11b-SM-7P8Q6 50-59 years, male 48419.7
GTEX-N7MT-0011-R11A-SM-2I3DZ 60-69 years, female 47658.5
GTEX-132Q8-0011-R11b-SM-5DUW9 60-69 years, male 45984.4
GTEX-14BIN-0011-R11a-SM-5SI79 50-59 years, female 45335.4
GTEX-17JCI-0011-R11a-SM-7189Y 60-69 years, female 44799.2
GTEX-1GMRU-0011-R11b-SM-C1YQ4 50-59 years, male 44402.1
GTEX-1F75W-0011-R11b-SM-AHZ34 60-69 years, male 42240.8
GTEX-13OW8-0011-R11a-SM-5L3GT 60-69 years, male 42068.3
GTEX-1JJ6O-0011-R11b-SM-EXUS2 60-69 years, male 41921.0
GTEX-16GPK-0011-R11b-SM-7MKFF 60-69 years, male 41270.4
GTEX-1E1VI-0011-R11a-SM-9OSWI 50-59 years, male 41136.0
GTEX-13FTY-0011-R11a-SM-5IJEA 40-49 years, female 38648.3
GTEX-12WSF-0011-R11a-SM-5LZVT 70-79 years, male 38254.8
GTEX-1JJEA-0011-R11a-SM-EXUTE 60-69 years, male 38200.0
GTEX-1I19N-0011-R11b-SM-ARU6Y 70-79 years, male 38113.4
GTEX-145MI-0011-R11a-SM-5P9JZ 60-69 years, female 37427.2
GTEX-1LVAO-0011-R11b-SM-EXOI8 60-69 years, male 37081.3
GTEX-11ZTS-0011-R11a-SM-DO113 60-69 years, female 36418.2
GTEX-ZE7O-0011-R11a-SM-57WBC 50-59 years, female 36263.0
GTEX-1EKGG-0011-R11a-SM-9QEHZ 60-69 years, male 36024.6
GTEX-1HCU6-0011-R11b-SM-AHZ2F 60-69 years, female 35791.8
GTEX-1H3O1-0011-R11a-SM-A96RV 60-69 years, male 34759.7
GTEX-1IL2U-0011-R11a-SM-CE6SO 60-69 years, male 34463.5
GTEX-14E7W-0011-R11a-SM-5ZZVA 70-79 years, male 34442.0
GTEX-1I1HK-0011-R11a-SM-B2LVN 60-69 years, male 33654.2
GTEX-1GF9W-0011-R11b-SM-9OSXG 60-69 years, male 33325.4
GTEX-QMR6-0011-R11A-SM-32PKK 50-59 years, male 32205.7
GTEX-UTHO-0011-R11A-SM-3GIJE 60-69 years, male 32157.6
GTEX-ZVZQ-0011-R11a-SM-51MS6 60-69 years, female 31940.3
GTEX-13X6I-0011-R11a-SM-5P9HN 60-69 years, male 31406.8
GTEX-1J8EW-0011-R11a-SM-AHZ37 60-69 years, female 30748.4
GTEX-RVPV-0011-R11A-SM-2TF6F 60-69 years, male 30523.8
GTEX-1GMR8-0011-R11b-SM-9OSX2 50-59 years, female 30232.3
GTEX-13JVG-0011-R11a-SM-5KM53 60-69 years, male 30017.9
GTEX-13FHP-0011-R11b-SM-5LZXP 50-59 years, male 29928.1
GTEX-WHSE-0011-R11A-SM-3P5YY 20-29 years, male 29361.6
GTEX-NPJ7-0011-R11A-SM-2I3E8 60-69 years, female 29210.9
GTEX-18A6Q-0011-R11a-SM-72D6H 60-69 years, male 29152.1
GTEX-14E6D-0011-R11b-SM-664NP 50-59 years, male 29145.9
GTEX-TSE9-0011-R11A-SM-3DB7N 60-69 years, female 28871.6
GTEX-XMD1-0011-R11A-SM-4AT5J 60-69 years, male 28618.0
GTEX-X261-0011-R11A-SM-4E3JY 50-59 years, male 28482.8
GTEX-13JUV-0011-R11a-SM-5LZYH 40-49 years, female 28168.4
GTEX-1H3VE-0011-R11b-SM-C1YRP 40-49 years, male 28001.1
GTEX-1H1DG-0011-R11a-SM-C1YQK 70-79 years, male 27953.8
GTEX-13X6J-0011-R11a-SM-5P9HE 50-59 years, male 27809.7
GTEX-11TTK-0011-R11b-SM-DO112 60-69 years, female 27351.0
GTEX-13RTJ-0011-R11a-SM-5O9CK 60-69 years, male 27284.7
GTEX-1B933-0011-R11a-SM-7P8PM 50-59 years, female 27255.5
GTEX-13OW7-0011-R11a-SM-5O9DY 50-59 years, male 27115.1
GTEX-1IL2V-0011-R11a-SM-ARU6T 70-79 years, male 26923.9
GTEX-RU72-0011-R11A-SM-CM2U1 50-59 years, female 26907.3
GTEX-14ASI-0011-R11b-SM-6AJBJ 60-69 years, male 26892.4
GTEX-15DCD-0011-R11a-SM-D4P1R 70-79 years, female 26267.0
GTEX-13CF2-0011-R11b-SM-5LZXO 60-69 years, male 26260.0
GTEX-12WSH-0011-R11a-SM-5LZVM 50-59 years, male 25681.2
GTEX-1KD4Q-0011-R11b-SM-EXOIE 40-49 years, male 25605.9
GTEX-13SLW-0011-R11a-SM-5SI8Q 70-79 years, male 25583.0
GTEX-NL4W-0011-R11A-SM-2I3DW 50-59 years, male 25264.0
GTEX-ZDXO-0011-R11a-SM-4WWD9 60-69 years, male 25187.1
GTEX-1GTWX-0011-R11b-SM-C1YQJ 60-69 years, male 24910.3
GTEX-17EVP-0011-R11a-SM-7EWDL 40-49 years, male 24904.0
GTEX-1GZ4I-0011-R11b-SM-9OSWR 50-59 years, male 24865.1
GTEX-1H3NZ-0011-R11b-SM-CE6SF 60-69 years, male 24802.7
GTEX-1J1OQ-0011-R11a-SM-A96S3 40-49 years, female 24737.1
GTEX-12WSC-0011-R11a-SM-5GU5J 50-59 years, male 24144.4
GTEX-1N2DW-0011-R11b-SM-EXOIL 50-59 years, male 23922.7
GTEX-14C5O-0011-R11b-SM-6872H 60-69 years, male 23879.7
GTEX-145LU-0011-R11b-SM-5P9JX 50-59 years, male 23786.4
GTEX-1I1GQ-0011-R11b-SM-CKZPA 50-59 years, male 23713.5
GTEX-144GL-0011-R11b-SM-5P9F6 50-59 years, male 23530.7
GTEX-1F75A-0011-R11a-SM-AHZ35 50-59 years, male 23520.3
GTEX-1F52S-0011-R11a-SM-CJI23 60-69 years, female 23449.2
GTEX-13S7M-0011-R11b-SM-5P9HU 60-69 years, female 23374.9
GTEX-11ZUS-0011-R11b-SM-5BC7B 30-39 years, male 23100.5
GTEX-11DZ1-0011-R11b-SM-DO11W 50-59 years, male 23096.6
GTEX-YJ89-0011-R11a-SM-4SOKA 60-69 years, male 23063.6
GTEX-1313W-0011-R11a-SM-5DUXN 50-59 years, female 22910.9
GTEX-T2IS-0011-R11A-SM-32QPC 20-29 years, female 22857.7
GTEX-1B8SF-0011-R11a-SM-79OOP 60-69 years, male 22836.5
GTEX-1I1GV-0011-R11a-SM-CJI3Z 60-69 years, male 22684.4
GTEX-13O3O-0011-R11b-SM-5KM4G 60-69 years, female 22549.4
GTEX-1LSVX-0011-R11b-SM-EXOIA 60-69 years, male 22116.2
GTEX-1F48J-0011-R11b-SM-9OSWV 50-59 years, female 22105.2
GTEX-1IGQW-0011-R11a-SM-C1YRV 60-69 years, male 21718.7
GTEX-13FHO-0011-R11b-SM-5LZYQ 60-69 years, male 21566.2
GTEX-1ICLZ-0011-R11a-SM-CJI3N 60-69 years, male 21061.6
GTEX-1A3MX-0011-R11b-SM-7DUGP 60-69 years, male 21044.9
GTEX-14BIM-0011-R11b-SM-5S2RN 60-69 years, female 21029.7
GTEX-11OF3-0011-R11a-SM-57WCR 60-69 years, male 21013.7
GTEX-13G51-0011-R11b-SM-5J2NE 60-69 years, male 20796.7
GTEX-ZUA1-0011-R11b-SM-51MTI 40-49 years, male 20568.3
GTEX-WL46-0011-R11A-SM-3MJFT 50-59 years, male 20470.6
GTEX-S7SE-0011-R11A-SM-2XCDD 50-59 years, male 20430.4
GTEX-T5JC-0011-R11A-SM-32PMB 20-29 years, male 20235.9
GTEX-1IY9M-0011-R11b-SM-A96TI 60-69 years, male 20234.7
GTEX-15DYW-0011-R11a-SM-6LPIT 60-69 years, female 20099.1
GTEX-1HGF4-0011-R11a-SM-C1YRR 60-69 years, male 19966.5
GTEX-11PRG-0011-R11b-SM-DNZZY 50-59 years, male 19909.5
GTEX-13FLV-0011-R11a-SM-5LZZ7 50-59 years, male 19817.9
GTEX-13OVL-0011-R11b-SM-5L3G7 50-59 years, male 19724.6
GTEX-12WSI-0011-R11b-SM-5P9EZ 50-59 years, male 19617.3
GTEX-1HSKV-0011-R11b-SM-AHZ2E 60-69 years, male 19609.4
GTEX-13N2G-0011-R11a-SM-5MR3F 60-69 years, male 19528.7
GTEX-P44G-0011-R11A-SM-2I3FD 30-39 years, male 19465.9
GTEX-16YQH-0011-R11b-SM-7LT98 30-39 years, male 19436.6
GTEX-12ZZZ-0011-R11a-SM-5EGLC 60-69 years, male 19317.5
GTEX-N7MS-0011-R11A-SM-2HMJS 60-69 years, male 19214.5
GTEX-1CB4G-0011-R11a-SM-9OSWG 60-69 years, male 19139.8
GTEX-18464-0011-R11a-SM-72D76 50-59 years, male 19037.8
GTEX-12126-0011-R11a-SM-5BC6X 20-29 years, male 18911.1
GTEX-1H1CY-0011-R11a-SM-C1YQR 60-69 years, female 18765.2
GTEX-1399T-0011-R11a-SM-5J2O1 60-69 years, male 18746.0
GTEX-17HII-0011-R11b-SM-7KFSX 50-59 years, male 18650.6
GTEX-14PN4-0011-R11a-SM-686ZW 50-59 years, male 18585.0
GTEX-WZTO-0011-R11A-SM-4E3K9 40-49 years, male 18543.6
GTEX-1F6I4-0011-R11b-SM-9OSWS 60-69 years, male 18505.0
GTEX-12WSM-0011-R11a-SM-5DUX8 60-69 years, male 18485.8
GTEX-Y8DK-0011-R11A-SM-4SOK2 60-69 years, male 18320.4
GTEX-1AX9I-0011-R11b-SM-7DHN4 60-69 years, male 18257.5
GTEX-13VXU-0011-R11b-SM-5O9DJ 50-59 years, male 18256.0
GTEX-QDT8-0011-R11A-SM-32PKD 30-39 years, female 18244.7
GTEX-1HBPI-0011-R11b-SM-CE6SH 50-59 years, male 17894.3
GTEX-1H1ZS-0011-R11a-SM-C1YQM 70-79 years, male 17891.5
GTEX-145MH-0011-R11a-SM-5P9HQ 50-59 years, male 17725.7
GTEX-13NYB-0011-R11a-SM-5KM3Q 40-49 years, male 17669.6
GTEX-17F97-0011-R11b-SM-7KFRQ 50-59 years, male 17615.1
GTEX-13FXS-0011-R11a-SM-5L3DM 50-59 years, male 17464.6
GTEX-14ABY-0011-R11a-SM-5SI7C 50-59 years, male 17392.2
GTEX-ZAB4-0011-R11a-SM-4SOKI 40-49 years, male 17328.7
GTEX-P44H-0011-R11A-SM-2XCER 40-49 years, male 17218.7
GTEX-13OW5-0011-R11b-SM-5L3GG 60-69 years, male 17148.9
GTEX-1GN73-0011-R11b-SM-9OSX4 60-69 years, male 17138.1
GTEX-13NYS-0011-R11b-SM-5MR4P 60-69 years, male 16969.7
GTEX-139TT-0011-R11b-SM-5LZV1 60-69 years, male 16854.7
GTEX-1EMGI-0011-R11b-SM-9OSWX 60-69 years, male 16711.3
GTEX-1N2EE-0011-R11b-SM-EXOIJ 60-69 years, male 16655.4
GTEX-NPJ8-0011-R11A-SM-2YUMS 40-49 years, male 16613.8
GTEX-11GSP-0011-R11b-SM-5NQ7V 60-69 years, female 16512.8
GTEX-131YS-0011-R11b-SM-5EGLM 60-69 years, female 16502.0
GTEX-17HG3-0011-R11b-SM-7KFT4 30-39 years, female 16486.4
GTEX-15EO6-0011-R11b-SM-6M47M 50-59 years, male 16413.7
GTEX-15G19-0011-R11b-SM-6LPIH 60-69 years, male 16252.5
GTEX-13X6K-0011-R11a-SM-5P9F5 60-69 years, female 16238.9
GTEX-13OVH-0011-R11b-SM-5KM4X 70-79 years, male 16008.6
GTEX-Z93S-0011-R11a-SM-4RGNN 50-59 years, male 15854.0
GTEX-11H98-0011-R11b-SM-5NQ6U 50-59 years, male 15358.4
GTEX-1R9PO-0011-R11b-SM-EZ6NB 60-69 years, female 15239.7
GTEX-11DXY-0011-R11a-SM-DNZZN 60-69 years, male 15220.3
GTEX-1I1GR-0011-R11a-SM-CM2T5 60-69 years, male 15142.6
GTEX-1IKK5-0011-R11a-SM-C1YRX 60-69 years, male 14920.9
GTEX-R55E-0011-R11A-SM-2TC6I 20-29 years, male 14694.2
GTEX-13O3Q-0011-R11b-SM-5KM2W 50-59 years, male 14688.7
GTEX-1JMQJ-0011-R11a-SM-EXOJY 50-59 years, male 14547.3
GTEX-YFC4-0011-R11a-SM-4SOK6 40-49 years, female 14461.9
GTEX-1B8L1-0011-R11b-SM-793DJ 60-69 years, male 14436.6
GTEX-13OVJ-0011-R11a-SM-5P9H8 50-59 years, female 14221.6
GTEX-12WSE-0011-R11b-SM-5P9JW 20-29 years, male 14095.3
GTEX-1I1GS-0011-R11a-SM-C1YRU 60-69 years, male 14090.9
GTEX-1IDJH-0011-R11b-SM-C1YRT 70-79 years, male 13977.8
GTEX-1F7RK-0011-R11b-SM-9QEI2 20-29 years, female 13874.3
GTEX-15CHQ-0011-R11b-SM-686ZZ 60-69 years, male 13681.3
GTEX-WWYW-0011-R11A-SM-3NB38 50-59 years, female 13365.9
GTEX-14DAQ-0011-R11a-SM-664NO 60-69 years, female 13351.4
GTEX-12ZZX-0011-R11a-SM-5DUVJ 40-49 years, female 13338.3
GTEX-15ER7-0011-R11a-SM-6LPIL 20-29 years, female 13184.6
GTEX-1LG7Y-0011-R11a-SM-EXOIH 50-59 years, male 13096.0
GTEX-13SLX-0011-R11b-SM-5O9C8 50-59 years, female 12694.7
GTEX-1HFI6-0011-R11b-SM-A96RU 40-49 years, male 12645.4
GTEX-1HB9E-0011-R11b-SM-ARU79 50-59 years, male 12424.3
GTEX-131XH-0011-R11a-SM-5EGLN 50-59 years, male 11634.1
GTEX-T6MN-0011-R11A-SM-32QOX 50-59 years, male 11620.9
GTEX-11DYG-0011-R11a-SM-DNZZP 60-69 years, male 11544.0
GTEX-18465-0011-R11a-SM-72D78 50-59 years, male 11427.0
GTEX-X4XX-0011-R11A-SM-46MWQ 60-69 years, male 11305.0
GTEX-NL3H-0011-R11A-SM-2I3E6 60-69 years, male 11200.7
GTEX-WVLH-0011-R11A-SM-3MJFO 50-59 years, male 10904.1
GTEX-Q2AG-0011-R11A-SM-2HMKZ 40-49 years, female 10543.0
GTEX-13OW6-0011-R11a-SM-5L3H2 50-59 years, male 10469.6
GTEX-X4EP-0011-R11B-SM-4QASK 60-69 years, female 6512.4
GTEX-X585-0011-R11B-SM-46MUZ 50-59 years, male 4745.9
Show allShow less
Brain - Cerebellum
Average nTPM: 30608.4
Samples: 241

Max nTPM: 155865.3
Min nTPM: 8077.6
Std nTPM: 20054.4
Median nTPM: 23766.5
GTEX-1RNSC-3126-SM-EVR4V 60-69 years, male 155865.3
GTEX-1E2YA-2926-SM-7MGWX 50-59 years, male 125954.9
GTEX-1EH9U-3126-SM-7MXU5 60-69 years, male 119841.3
GTEX-1KANB-3226-SM-D4P3G 50-59 years, male 114987.3
GTEX-16Z82-2926-SM-6LPJJ 60-69 years, male 103102.5
GTEX-14PJO-2926-SM-686ZI 60-69 years, male 101303.2
GTEX-1E1VI-2926-SM-7IGLT 50-59 years, male 90200.0
GTEX-1JJE9-3026-SM-CNNPA 70-79 years, male 85562.0
GTEX-OHPN-2626-SM-2I5H1 60-69 years, female 83937.5
GTEX-1QEPI-3026-SM-EXOIW 60-69 years, female 81580.5
GTEX-16XZZ-2926-SM-6LPK4 60-69 years, male 80333.9
GTEX-1EWIQ-3026-SM-7IGOJ 70-79 years, female 77591.5
GTEX-1269C-3126-SM-5EGI6 60-69 years, female 74865.1
GTEX-1B8SG-1926-SM-73KUB 50-59 years, male 69640.1
GTEX-1BAJH-3126-SM-7MGXY 70-79 years, male 64242.9
GTEX-14E6D-2926-SM-664OP 50-59 years, male 61247.6
GTEX-1IKOH-2826-SM-CNNRC 60-69 years, female 59450.2
GTEX-14A5I-2826-SM-5SIBF 50-59 years, female 58121.0
GTEX-13PVQ-2926-SM-5L3HJ 50-59 years, male 57263.4
GTEX-ZF28-2926-SM-4WKG1 60-69 years, male 53155.0
GTEX-11EI6-2926-SM-5985U 60-69 years, male 53129.0
GTEX-1RQEC-3026-SM-DPRXM 60-69 years, male 50424.6
GTEX-1H3VE-2826-SM-9WPOL 40-49 years, male 48127.9
GTEX-1KD4Q-3026-SM-EV7A7 40-49 years, male 47961.5
GTEX-11ZVC-3026-SM-59HJM 50-59 years, female 47831.9
GTEX-145MG-3126-SM-5Q5D3 50-59 years, male 47311.7
GTEX-1GZHY-3026-SM-7MXVA 50-59 years, female 47085.2
GTEX-1HSMO-2926-SM-C1YR5 60-69 years, male 46943.8
GTEX-14JFF-2826-SM-6871Q 60-69 years, male 45564.6
GTEX-1C6VR-3026-SM-7IGLW 60-69 years, male 45236.7
GTEX-11ZTS-3226-SM-5EGID 60-69 years, female 42854.3
GTEX-1GF9V-3026-SM-7P8R8 60-69 years, male 42717.8
GTEX-NPJ7-2826-SM-2I3FU 60-69 years, female 41338.1
GTEX-147F4-3026-SM-5Q5BJ 50-59 years, male 41107.7
GTEX-183WM-2726-SM-7KFRF 70-79 years, female 40974.7
GTEX-1GTWX-2926-SM-7MXV4 60-69 years, male 40754.3
GTEX-1A8G7-3026-SM-73KTT 60-69 years, male 39885.2
GTEX-PWO3-1026-SM-2I5F2 60-69 years, female 39714.2
GTEX-1H4P4-2726-SM-9JGGB 50-59 years, male 39595.9
GTEX-P44G-2526-SM-2I5EK 30-39 years, male 38870.3
GTEX-ZVT3-2926-SM-5GU6M 60-69 years, female 38813.6
GTEX-1F6IF-3026-SM-7P8QN 60-69 years, male 38373.4
GTEX-11TTK-2826-SM-5GU5K 60-69 years, female 37934.7
GTEX-17JCI-3026-SM-7EWDR 60-69 years, female 37294.9
GTEX-QMR6-1326-SM-32PLB 50-59 years, male 37161.5
GTEX-18A6Q-2826-SM-7LTAO 60-69 years, male 37012.5
GTEX-13RTJ-3126-SM-5S2Q4 60-69 years, male 35991.7
GTEX-13OW8-2926-SM-5L3FV 60-69 years, male 35649.4
GTEX-11EMC-3326-SM-5P9JH 60-69 years, female 35528.4
GTEX-1IL2V-3026-SM-CYPSA 70-79 years, male 35429.6
GTEX-1H3O1-1826-SM-A96TO 60-69 years, male 35285.1
GTEX-1JMOU-2826-SM-EV79R 60-69 years, female 35004.6
GTEX-13OW7-2926-SM-5MR3Z 50-59 years, male 34703.4
GTEX-1I1HK-2726-SM-AHZ2M 60-69 years, male 34523.2
GTEX-1EKGG-3126-SM-9WPO5 60-69 years, male 34445.5
GTEX-1H3NZ-2926-SM-9WPQ8 60-69 years, male 34169.2
GTEX-1A8G6-3126-SM-731D8 60-69 years, male 34058.7
GTEX-1RDX4-3226-SM-DPS14 50-59 years, female 33887.5
GTEX-1HB9E-3126-SM-AHZ4M 50-59 years, male 33724.3
GTEX-ZYFD-2926-SM-5GID9 50-59 years, male 33667.2
GTEX-1H1CY-3026-SM-9OSW7 60-69 years, female 33601.4
GTEX-1HBPH-3026-SM-9WPNY 40-49 years, female 33480.5
GTEX-1F52S-3026-SM-7P8PV 60-69 years, female 33407.8
GTEX-139TS-3126-SM-5LZWX 60-69 years, male 33202.0
GTEX-1128S-2826-SM-5N9DI 60-69 years, female 33105.8
GTEX-17EVQ-2726-SM-7EWDT 70-79 years, male 33055.9
GTEX-13CF2-3026-SM-5IFFX 60-69 years, male 32914.1
GTEX-R55E-2526-SM-2TC6H 20-29 years, male 32902.3
GTEX-1C6WA-3326-SM-7MKGN 60-69 years, male 32862.9
GTEX-1F75W-3126-SM-7P8SJ 60-69 years, male 32301.8
GTEX-144GL-2926-SM-5O99F 50-59 years, male 31624.7
GTEX-1JJ6O-3026-SM-C1YQH 60-69 years, male 31595.7
GTEX-1HCVE-2926-SM-9WPPJ 50-59 years, male 31424.3
GTEX-131YS-3026-SM-5EGHY 60-69 years, female 31327.5
GTEX-ZZPT-2926-SM-5EQ5S 50-59 years, male 30925.6
GTEX-14BIN-3326-SM-5Q5E6 50-59 years, female 30893.8
GTEX-X261-3126-SM-4PQZC 50-59 years, male 30858.5
GTEX-1JMQK-2926-SM-D4P2T 60-69 years, male 30580.3
GTEX-13FHP-2926-SM-5IJG9 50-59 years, male 30499.8
GTEX-13N2G-3126-SM-5IJGL 60-69 years, male 30040.1
GTEX-12WSM-2126-SM-5GCOC 60-69 years, male 29972.5
GTEX-1H1DG-2826-SM-9JGHB 70-79 years, male 29921.5
GTEX-1B8L1-3226-SM-7P8OX 60-69 years, male 29790.7
GTEX-1CB4H-3026-SM-79OLX 60-69 years, female 29621.3
GTEX-1399T-3126-SM-5IJFS 60-69 years, male 29594.0
GTEX-1EX96-3126-SM-9JGGC 50-59 years, male 29397.3
GTEX-13OW5-3126-SM-5MR3Y 60-69 years, male 29056.5
GTEX-Y111-2826-SM-4TT3O 50-59 years, male 29046.6
GTEX-N7MT-1226-SM-DKPOK 60-69 years, female 28835.2
GTEX-14C5O-2926-SM-5RQI1 60-69 years, male 28801.9
GTEX-15SHU-3026-SM-6LPIB 40-49 years, female 28692.0
GTEX-11ONC-3026-SM-5985W 60-69 years, male 28525.4
GTEX-132Q8-2926-SM-5IFFP 60-69 years, male 28300.3
GTEX-1R46S-3126-SM-DPRZ9 60-69 years, female 27825.6
GTEX-13G51-3126-SM-5IJG7 60-69 years, male 27648.7
GTEX-16YQH-2926-SM-6LPJE 30-39 years, male 27577.2
GTEX-11OC5-0626-SM-5HL6M 60-69 years, male 27561.9
GTEX-ZAK1-2926-SM-5HL9S 50-59 years, female 27493.4
GTEX-17HG3-2826-SM-7EPGO 30-39 years, female 27270.8
GTEX-1JMQJ-3126-SM-EV79G 50-59 years, male 27259.1
GTEX-ZDXO-2926-SM-4WKFM 60-69 years, male 27015.9
GTEX-17HII-2926-SM-79OMK 50-59 years, male 26792.8
GTEX-ZAB4-2926-SM-57WCV 40-49 years, male 26131.5
GTEX-1C64N-3126-SM-79OO3 50-59 years, male 26048.6
GTEX-XLM4-2926-SM-4AT59 60-69 years, male 25777.8
GTEX-14JIY-2326-SM-6AJAJ 60-69 years, male 25768.4
GTEX-YFC4-3026-SM-5IFJK 40-49 years, female 25658.1
GTEX-1I1CD-2926-SM-A96SJ 60-69 years, female 25543.7
GTEX-13O3O-3026-SM-5KM42 60-69 years, female 25169.6
GTEX-13FHO-2926-SM-5L3ES 60-69 years, male 25113.8
GTEX-XMD1-2826-SM-4AT5F 60-69 years, male 25033.1
GTEX-11DXW-1026-SM-5H11K 40-49 years, male 24968.3
GTEX-QVUS-2926-SM-3GIJB 60-69 years, female 24865.7
GTEX-ZYY3-3026-SM-5GIEJ 60-69 years, female 24683.0
GTEX-14ABY-3026-SM-664NE 50-59 years, male 24435.3
GTEX-12ZZZ-3126-SM-5LZU6 60-69 years, male 24256.1
GTEX-13X6K-2826-SM-5O9DS 60-69 years, female 24090.4
GTEX-12WSD-3026-SM-5LZU7 60-69 years, female 23980.5
GTEX-1I1GV-3026-SM-CNNR9 60-69 years, male 23911.5
GTEX-1KWVE-2226-SM-CXZKN 30-39 years, male 23770.1
GTEX-1H1ZS-2926-SM-9WPP2 70-79 years, male 23766.5
GTEX-1HBPI-2726-SM-9WPPF 50-59 years, male 23595.2
GTEX-145LU-2626-SM-5LU9Z 50-59 years, male 23509.4
GTEX-1GF9W-2726-SM-9JGGW 60-69 years, male 23385.6
GTEX-1F75A-2926-SM-7MXVN 50-59 years, male 23377.2
GTEX-YJ89-2926-SM-5P9IT 60-69 years, male 23338.1
GTEX-111FC-3326-SM-5GZYV 60-69 years, male 23112.4
GTEX-T5JC-2326-SM-32PMR 20-29 years, male 23101.5
GTEX-11PRG-2826-SM-5BC54 50-59 years, male 23074.1
GTEX-1GN73-3026-SM-7MXV8 60-69 years, male 23039.2
GTEX-1JMLX-3026-SM-EV79Q 50-59 years, male 23017.0
GTEX-147GR-3126-SM-5S2PM 60-69 years, male 22977.8
GTEX-1F48J-2726-SM-7P8PW 50-59 years, female 22882.2
GTEX-T2IS-2926-SM-32QPO 20-29 years, female 22773.1
GTEX-11DXY-3126-SM-5N9BT 60-69 years, male 22757.4
GTEX-14C39-3026-SM-5S2QE 40-49 years, male 22734.4
GTEX-1JJEA-2926-SM-C1YSK 60-69 years, male 22661.0
GTEX-13S7M-3026-SM-5S2QQ 60-69 years, female 22654.8
GTEX-13112-2926-SM-5DUWT 50-59 years, male 22596.4
GTEX-1CB4G-2926-SM-7MKFQ 60-69 years, male 22555.4
GTEX-1IY9M-3126-SM-AHZ3A 60-69 years, male 22393.5
GTEX-WVLH-2926-SM-3MJG5 50-59 years, male 22160.9
GTEX-Y8DK-0726-SM-4TT3S 60-69 years, male 22122.1
GTEX-1EMGI-3126-SM-7MXUR 60-69 years, male 22102.7
GTEX-11NUK-3026-SM-5986K 50-59 years, male 21985.0
GTEX-1JN1M-3126-SM-AHZ4E 60-69 years, female 21907.3
GTEX-12WSC-2926-SM-5BC5Z 50-59 years, male 21778.5
GTEX-NPJ8-2626-SM-2D7W2 40-49 years, male 21777.3
GTEX-1GZ4I-2926-SM-9JGGO 50-59 years, male 21627.0
GTEX-17HHY-2926-SM-79OJW 50-59 years, male 21590.7
GTEX-1B8SF-3026-SM-731DX 60-69 years, male 21424.1
GTEX-117XS-3126-SM-5GIDP 60-69 years, male 21308.8
GTEX-11DZ1-2926-SM-5A5KI 50-59 years, male 21286.5
GTEX-1HSKV-2926-SM-B2LWJ 60-69 years, male 21224.4
GTEX-RNOR-2226-SM-2TF5O 50-59 years, female 21194.3
GTEX-RU72-2926-SM-2TF66 50-59 years, female 21138.0
GTEX-12WSH-3126-SM-5LZW8 50-59 years, male 21132.2
GTEX-TSE9-2926-SM-3DB77 60-69 years, female 21090.7
GTEX-1POEN-2726-SM-E9U6B 30-39 years, female 21068.9
GTEX-11ZUS-2826-SM-5EQKW 30-39 years, male 20864.9
GTEX-QDT8-3026-SM-32PKB 30-39 years, female 20792.2
GTEX-13QIC-3026-SM-5LU58 60-69 years, female 20743.9
GTEX-1192X-3226-SM-5987D 50-59 years, male 20668.3
GTEX-14BIM-3126-SM-5Q5C7 60-69 years, female 20630.4
GTEX-14JG1-2926-SM-686ZK 40-49 years, male 20614.4
GTEX-15DYW-3026-SM-7KFRM 60-69 years, female 20538.5
GTEX-15ER7-3026-SM-6M47W 20-29 years, female 20524.8
GTEX-1313W-3026-SM-5LZUZ 50-59 years, female 20394.0
GTEX-13VXU-3026-SM-5LU3K 50-59 years, male 20385.7
GTEX-S7SE-2526-SM-2XCDL 50-59 years, male 20379.2
GTEX-WZTO-2826-SM-3NM8P 40-49 years, male 20285.0
GTEX-13OVL-3026-SM-5IJF1 50-59 years, male 20238.1
GTEX-11GSO-3026-SM-5Q5AL 60-69 years, male 20231.2
GTEX-1LSVX-2826-SM-EVR58 60-69 years, male 20184.7
GTEX-WL46-2826-SM-3LK81 50-59 years, male 20167.1
GTEX-13FXS-3026-SM-5LZYO 50-59 years, male 20132.8
GTEX-1PIIG-2826-SM-DTX7O 30-39 years, male 20078.8
GTEX-1EU9M-2926-SM-793DF 60-69 years, male 20018.3
GTEX-T6MN-2526-SM-32PMN 50-59 years, male 19813.1
GTEX-12126-0926-SM-5FQTW 20-29 years, male 19812.1
GTEX-1MJK2-3026-SM-EV7A5 50-59 years, male 19627.4
GTEX-11GSP-3126-SM-5A5LL 60-69 years, female 19589.2
GTEX-13OVH-2926-SM-5IJFH 70-79 years, male 19394.7
GTEX-13JUV-3026-SM-5K7WX 40-49 years, female 19394.2
GTEX-12ZZY-2926-SM-5DUXO 60-69 years, male 19383.9
GTEX-17F97-2926-SM-7DUEQ 50-59 years, male 19324.1
GTEX-13NYB-3226-SM-5J2ND 40-49 years, male 19172.4
GTEX-WHSE-2926-SM-3NMBG 20-29 years, male 19157.9
GTEX-145MH-2926-SM-5Q5D2 50-59 years, male 19157.7
GTEX-13JVG-3226-SM-5IJGJ 60-69 years, male 19019.6
GTEX-13X6I-2926-SM-5Q5C3 60-69 years, male 18976.6
GTEX-12WSE-2926-SM-5RQJ9 20-29 years, male 18972.3
GTEX-UTHO-2926-SM-3P5Z9 60-69 years, male 18751.5
GTEX-1B996-2926-SM-7MXUH 60-69 years, male 18744.3
GTEX-14PN4-3026-SM-664O4 50-59 years, male 18710.2
GTEX-11DYG-2926-SM-5H132 60-69 years, male 18680.9
GTEX-Q2AG-2826-SM-2HMJQ 40-49 years, female 18583.7
GTEX-QVJO-1325-SM-2S1QX 60-69 years, female 18493.5
GTEX-1NV8Z-3026-SM-DTX8Z 60-69 years, male 18249.5
GTEX-1P4AB-3026-SM-EXOJS 50-59 years, male 18247.9
GTEX-14PJM-3026-SM-6LLHM 50-59 years, female 18191.2
GTEX-1PWST-3026-SM-EAZ3H 70-79 years, male 18161.5
GTEX-Z93S-2826-SM-57WBL 50-59 years, male 18127.0
GTEX-1GZ2Q-3026-SM-9JGG3 40-49 years, male 18106.2
GTEX-1J1OQ-3126-SM-D4P2O 40-49 years, female 18098.4
GTEX-17EVP-2926-SM-793BU 40-49 years, male 18026.5
GTEX-13O3Q-3026-SM-5IJGD 50-59 years, male 18018.4
GTEX-N7MS-2526-SM-2D7W3 60-69 years, male 18016.3
GTEX-131XH-2926-SM-5LZU4 50-59 years, male 17979.3
GTEX-1A3MX-2926-SM-718B7 60-69 years, male 17952.9
GTEX-14BMV-2926-SM-5TDEE 50-59 years, male 17892.2
GTEX-14ASI-2926-SM-5Q5DG 60-69 years, male 17863.7
GTEX-139TT-2626-SM-5LZUB 60-69 years, male 17586.6
GTEX-1F6I4-3026-SM-7P8SI 60-69 years, male 17544.1
GTEX-14E7W-2926-SM-5S2R8 70-79 years, male 17516.7
GTEX-PVOW-2626-SM-32PL8 40-49 years, male 17501.6
GTEX-13X6J-2926-SM-7EPGP 50-59 years, male 17376.3
GTEX-11NV4-2226-SM-5BC4T 60-69 years, male 17186.3
GTEX-P44H-2426-SM-2XCEJ 40-49 years, male 17081.2
GTEX-1QP6S-3026-SM-EAZ4N 40-49 years, male 17018.1
GTEX-1B933-3026-SM-731DB 50-59 years, female 16989.8
GTEX-13OVJ-2726-SM-5IJG6 50-59 years, female 16720.9
GTEX-ZUA1-2926-SM-59HL3 40-49 years, male 16718.0
GTEX-1LG7Y-3126-SM-EV7AS 50-59 years, male 16650.5
GTEX-15G19-2826-SM-6M48K 60-69 years, male 16547.9
GTEX-15EO6-2926-SM-6M48D 50-59 years, male 16161.3
GTEX-145LS-3026-SM-5O99S 60-69 years, female 16092.9
GTEX-13SLX-3226-SM-5YYA6 50-59 years, female 15816.4
GTEX-11O72-2826-SM-5HL6W 40-49 years, male 15590.7
GTEX-12ZZX-2826-SM-5BC6K 40-49 years, female 15378.9
GTEX-18465-2926-SM-7KFSE 50-59 years, male 15366.2
GTEX-145MF-2826-SM-7EPGU 50-59 years, male 15327.0
GTEX-WWYW-3026-SM-3NB36 50-59 years, female 14760.1
GTEX-1JMPZ-2826-SM-C1YRA 30-39 years, male 14314.6
GTEX-1IDJH-3126-SM-C1YQS 70-79 years, male 14278.7
GTEX-14DAQ-3026-SM-5S2QZ 60-69 years, female 13714.3
GTEX-1R9PO-2826-SM-E6CPV 60-69 years, female 13527.0
GTEX-X4XX-2926-SM-3NMB1 60-69 years, male 13520.3
GTEX-13OW6-2926-SM-5KM29 50-59 years, male 12645.4
GTEX-ZAJG-3026-SM-5HL92 50-59 years, female 10677.3
GTEX-X4EP-3026-SM-3P5YP 60-69 years, female 8077.6
Show allShow less

CEREBELLUM - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

22801.0
Pig sample Sample description nTPM
Cerebellum
nTPM: 22801.0
Samples: 4

Max nTPM: 35909.2
Min nTPM: 16908.0
Sample A Female 35909.2
Sample B Female 19499.2
Sample C Male 18887.7
Sample D Male 16908.0

CEREBELLUM - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

28780.5
Mouse sample Sample description nTPM
Cerebellum
nTPM: 28780.5
Samples: 4

Max nTPM: 31094.9
Min nTPM: 26865.9
Sample A Male 26958.6
Sample B Male 30202.6
Sample C Female 26865.9
Sample D Female 31094.9

CEREBELLUM - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

15.1
Allen experiment id Experiment description Expression energy
Cerebellum
Expression energy: 15.1
81600592 Antisense, RP_090205_01_D01, Mouse strain C57BL/6J (56 days, male) 16.6
74357761 Antisense, RP_051219_04_A05, Mouse strain C57BL/6J (56 days, male) 13.7

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org