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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
2382.6
nTPM
FANTOM5:
2932.9
Scaled Tags Per Million
Pig:
2349.9
nTPM
Allen mouse:
21.1
Expression energy
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
2382.6
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 2045.4
2301
Female, age 85, both hemispheres
2484.4
2090
Male, age 80, both hemispheres
2290.7
2188
Female, age 91, both hemispheres
1969.8
1984
Male, age 76, both hemispheres
1436.7
Dorsal cochlear nucleus nTPM: 1963.2
2187
Female, age 91, both hemispheres
2310.5
2370
Male, age 61, both hemispheres
2127.2
2378
Male, age 80, both hemispheres
1823.5
2802
Male, age 74, right hemisphere
1789.7
2058
Male, age 76, both hemispheres
1765.2
Dorsal tegmental nucleus nTPM: 2382.6
2358
Male, age 61, both hemispheres
3793.5
2326
Male, age 74, both hemispheres
2198.8
2083
Male, age 80, both hemispheres
1949.5
1936
Male, age 76, left hemisphere
1588.4
Dorsolateral tegmental area nTPM: 2080.9
2337
Male, age 61, both hemispheres
3407.4
2654
Male, age 80, both hemispheres
1941.0
2360
Male, age 74, both hemispheres
1870.3
2751
Female, age 85, both hemispheres
1824.4
2141
Male, age 76, both hemispheres
1361.5
Kolliker-Fuse nucleus nTPM: 2170.6
2163
Male, age 80, both hemispheres
2204.2
2793
Female, age 91, left hemisphere
2172.1
2315
Male, age 76, right hemisphere
2135.5
Lateral lemniscal nuclei nTPM: 1768.1
2746
Female, age 85, left hemisphere
1920.5
2453
Male, age 74, right hemisphere
1805.9
2169
Male, age 76, both hemispheres
1764.1
2320
Female, age 91, left hemisphere
1709.4
2036
Male, age 80, both hemispheres
1640.6
Lateral parabrachial nucleus nTPM: 1986.4
2792
Male, age 76, both hemispheres
2221.0
2013
Male, age 80, both hemispheres
2030.9
2790
Male, age 61, both hemispheres
1969.3
2139
Female, age 85, right hemisphere
1724.5
Lateral vestibular nucleus nTPM: 2109.6
2311
Male, age 80, both hemispheres
2274.8
2184
Male, age 76, both hemispheres
1944.3
Locus coeruleus nTPM: 1694.2
2123
Female, age 91, both hemispheres
1947.8
2720
Male, age 74, both hemispheres
1832.3
2162
Male, age 80, both hemispheres
1761.5
1980
Male, age 76, both hemispheres
1702.5
2014
Male, age 55, unknown
1670.7
2317
Female, age 72, unknown
1648.3
2788
Male, age 74, unknown
1296.4
Medial parabrachial nucleus nTPM: 2035.8
2170
Female, age 91, both hemispheres
2631.8
2854
Male, age 80, both hemispheres
2117.8
2156
Male, age 61, both hemispheres
1998.9
2786
Male, age 76, both hemispheres
1796.2
2463
Female, age 85, right hemisphere
1634.3
Medial periolivary nuclei nTPM: 1879.2
2081
Male, age 80, both hemispheres
2144.9
2791
Male, age 74, right hemisphere
2144.2
2063
Male, age 76, both hemispheres
1750.8
2458
Female, age 91, both hemispheres
1729.8
2171
Female, age 85, both hemispheres
1626.4
Motor facial nucleus nTPM: 1797.6
2365
Male, age 74, right hemisphere
2475.8
2126
Male, age 61, both hemispheres
1911.9
2697
Female, age 85, both hemispheres
1893.8
2062
Male, age 76, both hemispheres
1729.1
2795
Female, age 91, both hemispheres
1483.6
2327
Male, age 80, both hemispheres
1291.4
Motor trigeminal nucleus nTPM: 1915.0
2335
Male, age 61, both hemispheres
2461.2
2560
Male, age 74, both hemispheres
2001.2
2321
Female, age 91, both hemispheres
1832.5
2309
Male, age 76, both hemispheres
1689.5
2079
Male, age 80, both hemispheres
1590.7
Nuclei of the trapezoid body nTPM: 1601.6
1983
Male, age 76, both hemispheres
1804.4
2159
Male, age 61, both hemispheres
1631.7
2166
Male, age 80, both hemispheres
1582.2
2735
Female, age 85, both hemispheres
1574.8
2368
Female, age 91, both hemispheres
1415.1
Nucleus raphe magnus nTPM: 1710.2
2455
Male, age 74, both hemispheres
2100.8
2051
Male, age 76, both hemispheres
1969.8
2160
Male, age 61, both hemispheres
1614.1
2459
Female, age 91, both hemispheres
1532.4
2328
Male, age 80, both hemispheres
1526.4
2172
Female, age 85, both hemispheres
1518.1
Paramedian reticular nucleus nTPM: 1814.0
2313
Male, age 61, both hemispheres
1918.0
2057
Male, age 80, both hemispheres
1877.8
2052
Male, age 76, both hemispheres
1791.5
2050
Female, age 85, both hemispheres
1668.8
Pedunculopontine tegmental nucleus nTPM: 2204.1
2338
Male, age 61, both hemispheres
3164.5
2334
Male, age 80, both hemispheres
2098.9
1921
Female, age 85, both hemispheres
1348.9
Pontine nuclei nTPM: 2026.0
2109
Female, age 72, unknown
2242.3
2454
Male, age 74, left hemisphere
2231.1
2115
Male, age 80, left hemisphere
2213.0
2319
Female, age 91, both hemispheres
2130.7
1863
Male, age 55, unknown
2112.5
2787
Female, age 85, both hemispheres
1874.3
1968
Male, age 76, left hemisphere
1832.7
2727
Male, age 61, right hemisphere
1571.5
Pontine raphe nucleus nTPM: 1505.4
2853
Male, age 76, midline
1523.2
2122
Female, age 85, midline
1487.6
Posteroventral cochlear nucleus nTPM: 2097.0
2341
Male, age 80, both hemispheres
2363.5
2371
Male, age 61, both hemispheres
2287.8
2135
Female, age 91, both hemispheres
2212.5
2070
Male, age 76, both hemispheres
1997.1
2752
Female, age 85, both hemispheres
1624.0
Principal sensory trigeminal nucleus nTPM: 1727.3
2324
Male, age 76, both hemispheres
2007.0
2367
Female, age 91, left hemisphere
2000.3
2158
Male, age 61, both hemispheres
1488.4
2008
Male, age 80, left hemisphere
1413.3
Reticular pontine nucleus, caudal nTPM: 1727.7
2559
Male, age 74, both hemispheres
2207.7
2092
Male, age 76, both hemispheres
1850.6
2457
Female, age 91, both hemispheres
1608.6
2332
Male, age 80, right hemisphere
1243.7
Reticular pontine nucleus, oral nTPM: 1850.2
2361
Male, age 74, both hemispheres
2328.3
1939
Male, age 80, both hemispheres
1874.4
2167
Male, age 76, both hemispheres
1773.6
2366
Female, age 91, both hemispheres
1675.4
2012
Female, age 85, both hemispheres
1599.2
Reticulotegmental nucleus nTPM: 1886.2
2452
Male, age 74, both hemispheres
2094.6
2322
Female, age 91, both hemispheres
2027.5
2333
Male, age 80, both hemispheres
1839.6
2325
Male, age 76, both hemispheres
1583.0
Spinal trigeminal nucleus, oral nTPM: 1866.0
2164
Male, age 80, both hemispheres
1978.1
2737
Female, age 85, both hemispheres
1872.7
1978
Male, age 76, both hemispheres
1747.2
Subcoeruleus area nTPM: 1858.8
2323
Female, age 91, left hemisphere
2049.2
2451
Male, age 74, both hemispheres
2024.4
2369
Female, age 85, left hemisphere
1876.3
1958
Male, age 80, both hemispheres
1713.2
2089
Male, age 76, left hemisphere
1631.0
Superior olive nTPM: 1804.4
2364
Male, age 74, right hemisphere
2452.6
2020
Male, age 76, both hemispheres
1817.7
2561
Female, age 91, both hemispheres
1736.7
2329
Male, age 80, right hemisphere
1521.7
1875
Female, age 85, both hemispheres
1493.6
Ventral periolivary nuclei nTPM: 1664.2
2023
Male, age 76, both hemispheres
1789.6
2130
Female, age 85, both hemispheres
1690.2
2794
Female, age 91, left hemisphere
1648.3
2165
Male, age 80, both hemispheres
1528.8
Ventrolateral tegmental area, A5 NE cell group nTPM: 1925.3
2359
Male, age 61, both hemispheres
2345.5
2840
Female, age 85, both hemispheres
1987.7
2449
Male, age 74, both hemispheres
1982.1
2161
Male, age 80, both hemispheres
1875.6
1959
Male, age 76, both hemispheres
1718.1
2456
Female, age 91, both hemispheres
1642.9
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
2349.9
Pig sample
Sample description
nTPM
Pons nTPM: 2350.0
Samples: 4
Max nTPM: 2617.2
Min nTPM: 1727.4
Sample A
Female
2587.8
Sample B
Female
1727.4
Sample C
Male
2467.4
Sample D
Male
2617.2
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.
The Human Protein Atlas project is funded
