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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:267.9 nTPM
HPA Brain:1147.9 nTPM
GTEx:267.9 nTPM
FANTOM5:751.0 Scaled Tags Per Million
Pig:1966.5 nTPM
Mouse:1990.7 nTPM
Allen mouse:6.5 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA018122Antibody HPA027478Antibody HPA028386Antibody CAB010337
Glial cells Not detectedNot detectedNot detectedHigh
Neuronal cells Not detectedLowMediumNot detected









BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1147.9
Sample id Sample description nTPM
Caudate nucleus
nTPM: 493.5
2288 Male, age 75, left hemisphere 719.1
2481 Female, age 94, left hemisphere 668.6
1781 Male, age 74, unknown 644.5
2846 Female, age 79, unknown 421.3
1857 Female, age 85, left hemisphere 401.5
2289 Male, age 61, right hemisphere 380.9
2290 Female, age 72, unknown 360.1
1854 Male, age 80, left hemisphere 352.2
Globus pallidus, externus
nTPM: 719.4
2772 Female, age 79, unknown 1045.8
2395 Male, age 75, both hemispheres 809.9
2646 Male, age 61, right hemisphere 666.9
1996 Male, age 80, right hemisphere 660.5
2567 Female, age 72, unknown 413.7
Globus pallidus, internus
nTPM: 707.4
2287 Male, age 75, right hemisphere 958.3
1818 Male, age 74, unknown 939.2
2483 Female, age 94, right hemisphere 802.7
2778 Female, age 91, both hemispheres 635.5
2037 Male, age 80, right hemisphere 627.1
2566 Female, age 72, unknown 578.9
2111 Female, age 85, right hemisphere 410.0
Nucleus accumbens
nTPM: 511.1
2286 Male, age 75, left hemisphere 686.0
1856 Female, age 91, right hemisphere 633.6
2732 Male, age 80, right hemisphere 593.6
2698 Female, age 72, unknown 533.9
2391 Female, age 94, left hemisphere 503.8
1783 Male, age 74, unknown 403.4
1806 Female, age 85, left hemisphere 398.0
2824 Male, age 61, right hemisphere 336.6
Nucleus basalis of Meynert
nTPM: 533.9
2821 Male, age 75, both hemispheres 649.3
2569 Male, age 61, both hemispheres 630.5
2484 Female, age 94, left hemisphere 504.1
2393 Male, age 80, right hemisphere 351.6
Nucleus of the diagonal band
nTPM: 1006.0
1812 Female, age 91, both hemispheres 1229.1
2775 Male, age 80, right hemisphere 1043.6
1979 Male, age 74, unknown 953.1
2195 Female, age 85, both hemispheres 926.9
2029 Male, age 61, right hemisphere 877.4
Putamen
nTPM: 455.8
2647 Male, age 75, left hemisphere 692.5
2482 Female, age 94, left hemisphere 606.2
1937 Female, age 91, right hemisphere 477.8
2466 Female, age 79, unknown 398.8
1829 Male, age 74, unknown 384.4
2489 Female, age 72, unknown 320.4
1838 Male, age 80, right hemisphere 310.3
Septal nuclei
nTPM: 944.3
2031 Female, age 72, unknown 1253.7
2009 Female, age 91, both hemispheres 1112.9
2629 Female, age 94, right hemisphere 951.4
1960 Male, age 74, unknown 948.7
2199 Male, age 80, right hemisphere 849.2
2394 Male, age 61, left hemisphere 840.8
2059 Female, age 85, both hemispheres 653.5
Stria terminalis, bed nucleus
nTPM: 1147.9
2201 Male, age 74, unknown 1307.7
1974 Female, age 91, both hemispheres 1253.2
2486 Female, age 94, both hemispheres 882.8

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

267.9
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 249.2
Samples: 246

Max nTPM: 848.3
Min nTPM: 133.8
Std nTPM: 68.7
Median nTPM: 239.5
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 848.3
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 701.8
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 454.7
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 421.4
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 399.4
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 390.9
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 369.4
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 367.9
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 347.3
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 347.1
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 339.4
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 338.8
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 338.1
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 329.5
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 329.1
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 327.3
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 326.8
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 326.6
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 326.0
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 319.6
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 319.2
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 314.2
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 311.8
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 311.7
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 311.3
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 310.5
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 310.1
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 309.3
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 309.2
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 309.0
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 307.7
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 300.5
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 300.0
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 297.7
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 297.2
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 296.9
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 296.8
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 295.6
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 295.2
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 291.8
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 288.3
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 286.7
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 286.7
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 286.5
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 286.2
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 284.5
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 283.7
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 282.4
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 282.2
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 280.8
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 280.2
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 280.1
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 279.8
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 279.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 278.9
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 276.6
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 276.4
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 274.4
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 273.6
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 273.2
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 272.9
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 272.0
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 271.3
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 271.0
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 270.9
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 270.5
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 270.0
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 269.4
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 266.7
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 266.5
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 266.3
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 265.9
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 265.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 265.3
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 264.8
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 264.7
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 264.1
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 263.9
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 263.0
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 262.8
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 262.2
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 261.3
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 260.8
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 260.2
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 259.4
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 259.3
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 258.3
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 258.2
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 258.1
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 258.0
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 257.5
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 255.3
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 254.7
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 254.0
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 253.9
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 252.9
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 252.9
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 252.7
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 252.7
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 252.7
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 252.7
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 252.6
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 251.8
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 250.6
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 250.1
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 248.2
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 248.2
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 247.7
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 247.5
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 246.6
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 246.3
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 245.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 245.3
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 244.8
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 243.8
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 243.8
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 243.7
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 243.3
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 242.0
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 241.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 241.2
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 240.7
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 239.5
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 239.5
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 238.9
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 238.2
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 237.9
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 237.6
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 237.6
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 237.6
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 234.9
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 233.5
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 233.4
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 233.3
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 233.2
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 232.7
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 231.8
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 231.7
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 231.6
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 231.5
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 230.2
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 230.0
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 229.6
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 229.1
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 229.0
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 228.4
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 228.0
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 228.0
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 226.8
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 226.6
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 225.9
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 225.4
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 225.3
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 225.3
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 224.9
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 224.1
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 224.0
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 223.7
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 223.6
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 222.6
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 221.8
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 221.6
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 221.4
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 221.1
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 220.2
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 219.8
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 219.7
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 218.4
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 218.0
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 217.7
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 217.0
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 216.9
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 216.8
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 216.8
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 216.7
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 216.5
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 216.3
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 216.0
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 215.5
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 215.5
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 214.0
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 212.0
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 211.8
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 211.6
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 211.6
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 211.4
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 210.8
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 210.7
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 210.7
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 210.7
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 210.5
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 210.3
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 207.7
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 207.4
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 207.4
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 207.1
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 205.8
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 205.5
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 205.2
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 204.4
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 204.0
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 203.8
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 202.5
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 200.7
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 200.4
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 200.1
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 199.8
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 199.1
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 198.9
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 198.8
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 198.5
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 197.3
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 196.7
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 194.4
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 193.4
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 193.4
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 193.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 192.8
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 190.9
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 190.1
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 189.9
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 186.9
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 186.5
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 186.2
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 183.9
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 182.7
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 182.5
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 182.3
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 182.2
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 179.7
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 178.4
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 178.1
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 175.0
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 173.7
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 173.6
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 171.3
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 170.6
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 170.6
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 169.9
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 168.4
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 168.2
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 166.8
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 159.9
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 142.2
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 139.3
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 133.8
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 267.9
Samples: 246

Max nTPM: 1518.6
Min nTPM: 89.8
Std nTPM: 113.8
Median nTPM: 250.4
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 1518.6
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 834.1
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 667.6
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 491.7
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 486.6
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 484.9
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 470.1
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 452.0
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 411.0
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 408.2
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 394.7
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 383.0
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 375.2
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 374.4
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 371.0
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 370.4
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 365.2
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 363.5
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 362.3
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 361.7
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 359.0
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 358.2
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 356.0
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 352.2
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 351.0
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 350.3
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 346.9
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 345.5
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 340.9
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 337.1
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 336.7
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 335.5
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 334.4
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 334.2
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 333.6
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 333.0
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 330.7
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 329.5
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 328.6
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 328.6
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 328.0
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 327.9
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 327.6
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 326.4
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 326.3
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 325.5
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 322.5
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 319.9
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 318.2
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 318.1
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 317.6
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 316.3
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 315.6
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 314.4
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 313.8
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 312.5
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 311.5
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 310.8
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 306.8
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 306.1
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 303.2
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 302.5
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 298.6
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 298.4
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 297.4
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 296.8
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 294.6
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 292.1
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 292.1
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 291.4
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 290.7
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 290.0
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 289.4
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 287.8
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 287.7
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 287.7
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 287.5
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 285.6
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 285.6
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 285.4
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 285.1
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 284.1
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 283.0
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 282.6
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 281.5
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 280.1
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 280.1
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 280.1
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 279.2
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 277.8
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 277.7
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 274.5
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 274.0
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 272.8
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 272.6
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 272.5
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 270.2
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 269.7
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 269.6
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 269.3
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 268.9
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 268.2
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 267.8
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 267.7
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 267.2
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 266.9
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 266.9
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 264.7
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 264.1
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 262.8
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 262.5
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 262.1
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 261.8
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 259.5
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 259.5
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 259.4
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 259.2
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 259.1
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 253.7
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 253.7
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 252.7
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 251.8
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 251.1
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 249.7
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 249.5
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 248.9
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 248.0
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 246.2
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 246.2
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 244.9
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 244.1
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 243.9
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 243.6
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 243.4
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 243.2
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 242.6
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 241.6
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 241.3
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 240.9
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 240.4
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 240.3
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 239.0
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 237.6
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 236.3
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 235.6
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 235.1
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 235.0
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 233.2
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 233.2
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 233.0
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 232.5
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 232.3
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 232.1
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 231.6
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 231.6
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 230.8
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 230.8
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 230.5
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 229.9
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 229.8
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 229.0
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 228.4
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 228.1
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 227.6
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 227.6
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 226.7
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 226.0
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 224.8
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 224.5
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 224.3
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 224.1
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 223.8
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 223.7
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 223.7
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 223.2
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 223.0
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 223.0
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 223.0
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 222.6
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 222.2
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 221.5
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 221.3
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 220.0
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 219.5
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 217.9
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 216.7
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 216.7
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 213.6
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 212.5
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 210.3
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 210.1
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 208.2
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 206.9
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 206.5
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 205.0
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 203.3
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 202.7
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 200.9
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 200.8
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 200.1
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 198.5
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 197.6
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 196.7
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 196.7
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 196.4
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 194.8
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 194.0
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 192.7
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 190.4
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 190.3
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 189.3
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 188.3
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 188.1
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 187.7
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 186.0
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 185.8
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 185.7
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 185.1
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 182.6
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 182.5
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 180.0
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 178.6
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 178.6
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 176.8
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 175.4
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 175.3
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 173.2
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 171.4
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 170.1
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 166.1
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 162.1
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 158.0
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 157.7
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 156.5
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 155.2
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 154.5
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 152.4
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 151.5
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 149.2
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 148.5
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 142.7
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 140.9
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 134.4
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 132.3
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 106.9
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 89.8
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Brain - Putamen (basal ganglia)
Average nTPM: 260.5
Samples: 205

Max nTPM: 548.3
Min nTPM: 128.3
Std nTPM: 54.5
Median nTPM: 254.8
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 548.3
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 388.8
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 371.2
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 369.1
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 360.9
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 360.0
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 359.5
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 358.2
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 354.7
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 352.0
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 351.6
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 351.4
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 350.3
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 344.1
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 342.4
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 342.2
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 340.6
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 340.2
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 335.8
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 335.8
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 335.7
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 334.3
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 332.6
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 332.1
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 329.4
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 328.4
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 324.8
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 324.6
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 319.6
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 317.8
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 314.9
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 314.2
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 314.0
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 312.2
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 310.1
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 309.8
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 309.4
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 308.1
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 307.1
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 306.4
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 305.8
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 303.5
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 301.8
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 301.2
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 300.8
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 299.7
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 299.4
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 298.7
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 297.4
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 297.3
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 297.0
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 295.6
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 295.0
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 294.3
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 293.8
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 292.1
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 290.9
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 290.6
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 290.3
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 288.9
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 288.7
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 287.3
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 287.2
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 286.5
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 286.4
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 286.3
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 286.2
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 285.9
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 285.3
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 285.2
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 284.7
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 281.4
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 279.5
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 278.8
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 277.2
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 275.1
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 274.5
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 274.0
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 273.9
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 273.8
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 270.1
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 270.0
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 269.9
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 268.6
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 268.6
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 268.5
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 268.3
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 267.4
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 267.3
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 266.9
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 264.0
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 262.8
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 261.1
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 260.3
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 259.6
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 259.3
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 257.6
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 257.2
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 256.7
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 255.5
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 255.4
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 254.8
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 254.8
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 253.2
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 253.0
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 251.6
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 249.2
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 248.8
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 248.6
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 247.1
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 246.7
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 246.3
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 244.1
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 243.9
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 243.6
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 242.0
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 241.6
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 240.6
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 239.5
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 239.4
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 239.2
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 238.3
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 237.7
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 236.6
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 236.3
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 235.6
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 235.3
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 234.9
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 234.3
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 234.2
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 233.6
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 233.2
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 232.7
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 232.4
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 231.9
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 231.7
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 231.1
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 230.9
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 230.8
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 230.5
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 230.3
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 230.2
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 229.8
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 228.1
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 227.8
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 227.7
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 227.6
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 227.3
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 226.4
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 226.2
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 225.3
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 224.5
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 224.2
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 223.7
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 221.1
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 220.5
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 220.5
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 220.5
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 220.2
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 219.9
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 219.3
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 218.9
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 218.8
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 217.7
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 216.9
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 214.3
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 213.2
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 212.4
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 212.0
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 211.7
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 210.4
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 208.3
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 208.3
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 208.0
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 206.7
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 205.9
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 205.4
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 203.3
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 203.2
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 201.9
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 201.4
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 200.3
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 199.5
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 198.6
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 198.2
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 197.8
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 197.4
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 195.6
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 194.2
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 191.3
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 189.3
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 187.4
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 187.1
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 186.1
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 184.9
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 183.8
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 179.3
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 178.2
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 178.2
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 174.5
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 168.5
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 164.6
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 159.5
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 140.8
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 128.3
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

751.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 599.2
FF:10164-103B2 76 years, female 599.2
Nucleus accumbens
Scaled Tags Per Million: 751.0
FF:10037-101F1 23-56 years, mixed 751.0
Putamen
Scaled Tags Per Million: 647.7
FF:10176-103C5 60 years, female 647.7
Globus pallidus
Scaled Tags Per Million: 682.1
FF:10175-103C4 60 years, female 692.9
FF:10161-103A8 76 years, female 671.2

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1966.5
Pig sample Sample description nTPM
Caudate
nTPM: 777.3
Samples: 4

Max nTPM: 850.9
Min nTPM: 672.9
Sample A Female 802.7
Sample B Female 850.9
Sample C Male 782.7
Sample D Male 672.9
Putamen
nTPM: 772.4
Samples: 4

Max nTPM: 1082.5
Min nTPM: 597.8
Sample A Female 1082.5
Sample B Female 597.8
Sample C Male 718.0
Sample D Male 691.3
Septum
nTPM: 1966.6
Samples: 4

Max nTPM: 2773.7
Min nTPM: 1159.7
Sample A Female 1615.5
Sample B Female 1159.7
Sample C Male 2773.7
Sample D Male 2317.3
Ventral pallidum
nTPM: 1041.3
Samples: 4

Max nTPM: 1581.1
Min nTPM: 693.1
Sample A Female 1005.8
Sample B Female 693.1
Sample C Male 1581.1
Sample D Male 885.2

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1990.7
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 887.1
Samples: 4

Max nTPM: 1050.1
Min nTPM: 733.9
Sample A Male 760.0
Sample B Male 733.9
Sample C Female 1050.1
Sample D Female 1004.5
Septum
nTPM: 1990.8
Samples: 4

Max nTPM: 2040.3
Min nTPM: 1903.3
Sample A Male 2013.4
Sample B Male 2040.3
Sample C Female 1903.3
Sample D Female 2006.0
Ventral forebrain
nTPM: 1338.2
Samples: 4

Max nTPM: 1405.8
Min nTPM: 1232.2
Sample A Male 1232.2
Sample B Male 1405.8
Sample C Female 1330.8
Sample D Female 1383.9

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

6.5
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 3.9
509 Antisense, RP_040507_01_H03, Mouse strain C57BL/6J (56 days, male) 7.8
510 Antisense, RP_040507_01_H03, Mouse strain C57BL/6J (56 days, male) 6.9
70230813 Antisense, RP_050524_04_E07, Mouse strain C57BL/6J (56 days, male) 0.0
Pallidum
Expression energy: 6.5
509 Antisense, RP_040507_01_H03, Mouse strain C57BL/6J (56 days, male) 13.0
510 Antisense, RP_040507_01_H03, Mouse strain C57BL/6J (56 days, male) 9.1
70230813 Antisense, RP_050524_04_E07, Mouse strain C57BL/6J (56 days, male) 0.0

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