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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
1961.5
nTPM
FANTOM5:
1935.0
Scaled Tags Per Million
Pig:
1745.2
nTPM
Allen mouse:
5.1
Expression energy
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
1961.5
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 896.0
2301
Female, age 85, both hemispheres
995.5
2090
Male, age 80, both hemispheres
918.6
1984
Male, age 76, both hemispheres
836.1
2188
Female, age 91, both hemispheres
833.8
Dorsal cochlear nucleus nTPM: 958.0
2058
Male, age 76, both hemispheres
1120.8
2187
Female, age 91, both hemispheres
1094.4
2370
Male, age 61, both hemispheres
1012.3
2802
Male, age 74, right hemisphere
842.7
2378
Male, age 80, both hemispheres
719.8
Dorsal tegmental nucleus nTPM: 1115.6
2083
Male, age 80, both hemispheres
1333.7
2358
Male, age 61, both hemispheres
1194.1
1936
Male, age 76, left hemisphere
991.0
2326
Male, age 74, both hemispheres
943.5
Dorsolateral tegmental area nTPM: 1104.7
2141
Male, age 76, both hemispheres
1334.1
2654
Male, age 80, both hemispheres
1288.0
2751
Female, age 85, both hemispheres
1115.7
2360
Male, age 74, both hemispheres
967.3
2337
Male, age 61, both hemispheres
818.6
Kolliker-Fuse nucleus nTPM: 998.3
2163
Male, age 80, both hemispheres
1313.5
2793
Female, age 91, left hemisphere
885.7
2315
Male, age 76, right hemisphere
795.8
Lateral lemniscal nuclei nTPM: 1258.3
2036
Male, age 80, both hemispheres
1568.1
2169
Male, age 76, both hemispheres
1555.3
2746
Female, age 85, left hemisphere
1389.7
2453
Male, age 74, right hemisphere
1022.0
2320
Female, age 91, left hemisphere
756.4
Lateral parabrachial nucleus nTPM: 1063.9
2139
Female, age 85, right hemisphere
1631.6
2013
Male, age 80, both hemispheres
1075.0
2790
Male, age 61, both hemispheres
1000.5
2792
Male, age 76, both hemispheres
548.3
Lateral vestibular nucleus nTPM: 1095.0
2184
Male, age 76, both hemispheres
1134.7
2311
Male, age 80, both hemispheres
1055.3
Locus coeruleus nTPM: 1961.5
2123
Female, age 91, both hemispheres
2847.4
2720
Male, age 74, both hemispheres
2103.8
2014
Male, age 55, unknown
2022.0
1980
Male, age 76, both hemispheres
1884.5
2317
Female, age 72, unknown
1780.1
2788
Male, age 74, unknown
1589.3
2162
Male, age 80, both hemispheres
1503.1
Medial parabrachial nucleus nTPM: 1174.7
2854
Male, age 80, both hemispheres
1319.5
2170
Female, age 91, both hemispheres
1306.7
2156
Male, age 61, both hemispheres
1269.9
2786
Male, age 76, both hemispheres
1075.6
2463
Female, age 85, right hemisphere
901.7
Medial periolivary nuclei nTPM: 1109.9
2171
Female, age 85, both hemispheres
1752.2
2063
Male, age 76, both hemispheres
1490.4
2791
Male, age 74, right hemisphere
891.9
2081
Male, age 80, both hemispheres
768.3
2458
Female, age 91, both hemispheres
646.8
Motor facial nucleus nTPM: 1162.5
2062
Male, age 76, both hemispheres
1676.9
2697
Female, age 85, both hemispheres
1283.6
2365
Male, age 74, right hemisphere
1109.0
2327
Male, age 80, both hemispheres
1078.1
2126
Male, age 61, both hemispheres
1019.9
2795
Female, age 91, both hemispheres
807.8
Motor trigeminal nucleus nTPM: 1072.8
2079
Male, age 80, both hemispheres
1271.1
2335
Male, age 61, both hemispheres
1222.9
2309
Male, age 76, both hemispheres
1136.8
2560
Male, age 74, both hemispheres
903.0
2321
Female, age 91, both hemispheres
830.0
Nuclei of the trapezoid body nTPM: 1328.5
2735
Female, age 85, both hemispheres
1778.8
2159
Male, age 61, both hemispheres
1604.2
1983
Male, age 76, both hemispheres
1603.7
2166
Male, age 80, both hemispheres
998.0
2368
Female, age 91, both hemispheres
657.8
Nucleus raphe magnus nTPM: 1366.2
2172
Female, age 85, both hemispheres
1940.6
2160
Male, age 61, both hemispheres
1887.5
2455
Male, age 74, both hemispheres
1410.1
2051
Male, age 76, both hemispheres
1125.7
2328
Male, age 80, both hemispheres
1102.0
2459
Female, age 91, both hemispheres
731.2
Paramedian reticular nucleus nTPM: 1466.9
2050
Female, age 85, both hemispheres
1668.7
2313
Male, age 61, both hemispheres
1659.0
2057
Male, age 80, both hemispheres
1549.8
2052
Male, age 76, both hemispheres
990.0
Pedunculopontine tegmental nucleus nTPM: 1222.0
2334
Male, age 80, both hemispheres
1408.8
1921
Female, age 85, both hemispheres
1272.3
2338
Male, age 61, both hemispheres
984.8
Pontine nuclei nTPM: 1398.7
2787
Female, age 85, both hemispheres
2460.3
1863
Male, age 55, unknown
1720.5
2727
Male, age 61, right hemisphere
1597.2
1968
Male, age 76, left hemisphere
1398.6
2109
Female, age 72, unknown
1379.6
2115
Male, age 80, left hemisphere
915.2
2319
Female, age 91, both hemispheres
874.2
2454
Male, age 74, left hemisphere
843.5
Pontine raphe nucleus nTPM: 1550.5
2122
Female, age 85, midline
1761.1
2853
Male, age 76, midline
1339.8
Posteroventral cochlear nucleus nTPM: 1012.8
2752
Female, age 85, both hemispheres
1533.4
2070
Male, age 76, both hemispheres
1245.0
2371
Male, age 61, both hemispheres
989.7
2341
Male, age 80, both hemispheres
690.2
2135
Female, age 91, both hemispheres
605.4
Principal sensory trigeminal nucleus nTPM: 1208.4
2158
Male, age 61, both hemispheres
1636.0
2008
Male, age 80, left hemisphere
1369.6
2324
Male, age 76, both hemispheres
1038.4
2367
Female, age 91, left hemisphere
789.5
Reticular pontine nucleus, caudal nTPM: 981.8
2092
Male, age 76, both hemispheres
1197.1
2332
Male, age 80, right hemisphere
1117.2
2559
Male, age 74, both hemispheres
931.3
2457
Female, age 91, both hemispheres
681.5
Reticular pontine nucleus, oral nTPM: 1096.4
2012
Female, age 85, both hemispheres
1435.7
1939
Male, age 80, both hemispheres
1201.0
2167
Male, age 76, both hemispheres
1158.7
2361
Male, age 74, both hemispheres
952.5
2366
Female, age 91, both hemispheres
734.2
Reticulotegmental nucleus nTPM: 1145.9
2325
Male, age 76, both hemispheres
1336.2
2452
Male, age 74, both hemispheres
1147.0
2333
Male, age 80, both hemispheres
1119.0
2322
Female, age 91, both hemispheres
981.3
Spinal trigeminal nucleus, oral nTPM: 1153.3
2737
Female, age 85, both hemispheres
1262.0
1978
Male, age 76, both hemispheres
1168.1
2164
Male, age 80, both hemispheres
1029.7
Subcoeruleus area nTPM: 1248.7
2323
Female, age 91, left hemisphere
1833.7
1958
Male, age 80, both hemispheres
1440.3
2089
Male, age 76, left hemisphere
1098.2
2451
Male, age 74, both hemispheres
1036.3
2369
Female, age 85, left hemisphere
835.2
Superior olive nTPM: 1128.1
1875
Female, age 85, both hemispheres
1709.7
2020
Male, age 76, both hemispheres
1104.7
2364
Male, age 74, right hemisphere
1075.1
2329
Male, age 80, right hemisphere
978.6
2561
Female, age 91, both hemispheres
772.3
Ventral periolivary nuclei nTPM: 1267.8
2130
Female, age 85, both hemispheres
1850.8
2165
Male, age 80, both hemispheres
1372.0
2023
Male, age 76, both hemispheres
1028.2
2794
Female, age 91, left hemisphere
820.1
Ventrolateral tegmental area, A5 NE cell group nTPM: 1052.3
2840
Female, age 85, both hemispheres
1349.6
1959
Male, age 76, both hemispheres
1199.4
2449
Male, age 74, both hemispheres
1088.7
2359
Male, age 61, both hemispheres
1085.1
2161
Male, age 80, both hemispheres
978.2
2456
Female, age 91, both hemispheres
612.5
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
1745.2
Pig sample
Sample description
nTPM
Pons nTPM: 1745.2
Samples: 4
Max nTPM: 1922.0
Min nTPM: 1499.7
Sample A
Female
1839.7
Sample B
Female
1719.5
Sample C
Male
1922.0
Sample D
Male
1499.7
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.
The Human Protein Atlas project is funded
