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HPA
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BRAIN CEREBELLUM Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Cerebellum
CEREBELLUM - Expression summary
Protein expression
Cerebellumi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Cells in granular layer: Not detected
Cells in molecular layer: Low
Purkinje cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:1598.2 nTPM
HPA Brain:2339.9 nTPM
GTEx:1598.2 nTPM
FANTOM5:1352.8 Scaled Tags Per Million
Pig:1455.5 nTPM
Mouse:2548.7 nTPM
Allen mouse:28.1 Expression energy

CEREBELLUM - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA040067Antibody HPA061280Antibody CAB005197Antibody CAB016392Antibody CAB079968
Purkinje cells Not detectedNot detectedLowNot detectedNot detected
Cells in granular layer LowNot detectedNot detectedLowNot detected
Cells in molecular layer Not detectedLowNot detectedMediumNot detected











CEREBELLUM - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

2339.9
Sample id Sample description nTPM
Cerebellar cortex
nTPM: 1050.7
1768 Female, age 72, unknown 1557.0
2101 Male, age 74, right hemisphere 1292.4
2055 Female, age 91, right hemisphere 1022.1
2003 Female, age 85, right hemisphere 951.2
1774 Male, age 80, left hemisphere 915.0
2006 Male, age 61, right hemisphere 898.4
1788 Male, age 55, unknown 885.6
1769 Male, age 76, right hemisphere 883.7
Cerebellar nuclei
nTPM: 2339.9
2783 Female, age 72, unknown 3583.0
2882 Male, age 76, left hemisphere 2739.0
2177 Female, age 85, both hemispheres 2682.9
2175 Male, age 61, right hemisphere 2242.0
1966 Female, age 91, left hemisphere 2107.6
1879 Male, age 55, unknown 2052.9
2005 Male, age 80, left hemisphere 2043.1
1871 Male, age 74, unknown 1875.6
2318 Male, age 74, left hemisphere 1732.9
Flocculonodular lobe
nTPM: 940.5
2004 Male, age 61, right hemisphere 1202.3
1792 Male, age 74, unknown 1023.3
1765 Male, age 55, unknown 987.8
1771 Male, age 80, left hemisphere 973.2
2176 Female, age 91, right hemisphere 856.5
1835 Female, age 85, right hemisphere 815.2
1767 Male, age 76, left hemisphere 725.4
Vermis
nTPM: 1009.2
1751 Male, age 74, right hemisphere 1303.3
1928 Female, age 72, unknown 1262.1
2834 Male, age 80, left hemisphere 1204.2
1766 Male, age 55, unknown 1197.7
1778 Female, age 91, left hemisphere 1078.4
1825 Male, age 74, unknown 873.2
1770 Male, age 76, left hemisphere 846.3
1988 Female, age 85, left hemisphere 663.2
2460 Male, age 61, both hemispheres 654.3

CEREBELLUM - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1598.2
GTEx sample id Sample description nTPM
Brain - Cerebellar Hemisphere
Average nTPM: 1587.7
Samples: 215

Max nTPM: 2959.3
Min nTPM: 816.9
Std nTPM: 344.6
Median nTPM: 1536.2
GTEX-16XZZ-0011-R11a-SM-7EPI3 60-69 years, male 2959.3
GTEX-16Z82-0011-R11a-SM-79OKJ 60-69 years, male 2681.5
GTEX-13FLV-0011-R11a-SM-5LZZ7 50-59 years, male 2670.0
GTEX-N7MT-0011-R11A-SM-2I3DZ 60-69 years, female 2557.1
GTEX-17EVP-0011-R11a-SM-7EWDL 40-49 years, male 2464.3
GTEX-1JJ6O-0011-R11b-SM-EXUS2 60-69 years, male 2366.9
GTEX-1F75W-0011-R11b-SM-AHZ34 60-69 years, male 2352.2
GTEX-13X6J-0011-R11a-SM-5P9HE 50-59 years, male 2308.4
GTEX-14ASI-0011-R11b-SM-6AJBJ 60-69 years, male 2291.7
GTEX-1B933-0011-R11a-SM-7P8PM 50-59 years, female 2279.3
GTEX-139UW-0011-R11a-SM-5IJGN 60-69 years, male 2254.0
GTEX-1313W-0011-R11a-SM-5DUXN 50-59 years, female 2251.8
GTEX-1CAV2-0011-R11a-SM-ARU8D 40-49 years, female 2185.5
GTEX-1F6I4-0011-R11b-SM-9OSWS 60-69 years, male 2149.7
GTEX-18A6Q-0011-R11a-SM-72D6H 60-69 years, male 2143.2
GTEX-1HBPI-0011-R11b-SM-CE6SH 50-59 years, male 2131.9
GTEX-12WSC-0011-R11a-SM-5GU5J 50-59 years, male 2100.9
GTEX-12WSD-0011-R11a-SM-9OSVC 60-69 years, female 2077.4
GTEX-1R9K4-0011-R11a-SM-EZ6N9 60-69 years, male 2057.7
GTEX-1LKK1-0011-R11a-SM-EXOIG 50-59 years, female 2048.3
GTEX-145MH-0011-R11a-SM-5P9HQ 50-59 years, male 2045.0
GTEX-NL4W-0011-R11A-SM-2I3DW 50-59 years, male 2031.2
GTEX-12ZZZ-0011-R11a-SM-5EGLC 60-69 years, male 2024.0
GTEX-1KD4Q-0011-R11b-SM-EXOIE 40-49 years, male 2008.2
GTEX-11ZTS-0011-R11a-SM-DO113 60-69 years, female 2006.6
GTEX-N7MS-0011-R11A-SM-2HMJS 60-69 years, male 2004.2
GTEX-15CHQ-0011-R11b-SM-686ZZ 60-69 years, male 1994.6
GTEX-1IOXB-0011-R11a-SM-A9G1X 50-59 years, male 1966.6
GTEX-14E7W-0011-R11a-SM-5ZZVA 70-79 years, male 1963.1
GTEX-1B8SG-0011-R11a-SM-7P8PF 50-59 years, male 1945.0
GTEX-1JJEA-0011-R11a-SM-EXUTE 60-69 years, male 1943.0
GTEX-1I1GV-0011-R11a-SM-CJI3Z 60-69 years, male 1934.2
GTEX-1CB4G-0011-R11a-SM-9OSWG 60-69 years, male 1930.6
GTEX-16GPK-0011-R11b-SM-7MKFF 60-69 years, male 1914.0
GTEX-ZVZQ-0011-R11a-SM-51MS6 60-69 years, female 1873.9
GTEX-X585-0011-R11B-SM-46MUZ 50-59 years, male 1866.1
GTEX-WWYW-0011-R11A-SM-3NB38 50-59 years, female 1865.3
GTEX-131XW-0011-R11a-SM-5DUV9 50-59 years, female 1865.0
GTEX-11ZUS-0011-R11b-SM-5BC7B 30-39 years, male 1864.9
GTEX-1H4P4-0011-R11b-SM-CE6S8 50-59 years, male 1862.8
GTEX-1HSKV-0011-R11b-SM-AHZ2E 60-69 years, male 1843.5
GTEX-WHSE-0011-R11A-SM-3P5YY 20-29 years, male 1839.6
GTEX-1F75A-0011-R11a-SM-AHZ35 50-59 years, male 1837.8
GTEX-1IY9M-0011-R11b-SM-A96TI 60-69 years, male 1833.5
GTEX-1EKGG-0011-R11a-SM-9QEHZ 60-69 years, male 1833.3
GTEX-144GL-0011-R11b-SM-5P9F6 50-59 years, male 1831.1
GTEX-17EVQ-0011-R11a-SM-7LT9C 70-79 years, male 1822.7
GTEX-139TT-0011-R11b-SM-5LZV1 60-69 years, male 1820.8
GTEX-1GF9W-0011-R11b-SM-9OSXG 60-69 years, male 1811.0
GTEX-16YQH-0011-R11b-SM-7LT98 30-39 years, male 1808.1
GTEX-1I1GQ-0011-R11b-SM-CKZPA 50-59 years, male 1783.7
GTEX-132Q8-0011-R11b-SM-5DUW9 60-69 years, male 1769.4
GTEX-1F7RK-0011-R11b-SM-9QEI2 20-29 years, female 1769.2
GTEX-14C39-0011-R11b-SM-5YYAF 40-49 years, male 1753.5
GTEX-1C64N-0011-R11b-SM-7P8Q6 50-59 years, male 1742.0
GTEX-12WSI-0011-R11b-SM-5P9EZ 50-59 years, male 1739.8
GTEX-ZE7O-0011-R11a-SM-57WBC 50-59 years, female 1732.3
GTEX-11DYG-0011-R11a-SM-DNZZP 60-69 years, male 1731.0
GTEX-1A3MX-0011-R11b-SM-7DUGP 60-69 years, male 1728.1
GTEX-1J8Q2-0011-R11a-SM-A9SKI 60-69 years, male 1727.7
GTEX-WL46-0011-R11A-SM-3MJFT 50-59 years, male 1727.5
GTEX-13NYS-0011-R11b-SM-5MR4P 60-69 years, male 1727.1
GTEX-1GMR8-0011-R11b-SM-9OSX2 50-59 years, female 1723.8
GTEX-13G51-0011-R11b-SM-5J2NE 60-69 years, male 1723.5
GTEX-1E1VI-0011-R11a-SM-9OSWI 50-59 years, male 1712.4
GTEX-131XH-0011-R11a-SM-5EGLN 50-59 years, male 1707.0
GTEX-1H1CY-0011-R11a-SM-C1YQR 60-69 years, female 1707.0
GTEX-13FXS-0011-R11a-SM-5L3DM 50-59 years, male 1701.2
GTEX-14PN4-0011-R11a-SM-686ZW 50-59 years, male 1700.5
GTEX-13O3O-0011-R11b-SM-5KM4G 60-69 years, female 1699.6
GTEX-17JCI-0011-R11a-SM-7189Y 60-69 years, female 1678.2
GTEX-1F52S-0011-R11a-SM-CJI23 60-69 years, female 1674.6
GTEX-1LG7Y-0011-R11a-SM-EXOIH 50-59 years, male 1671.8
GTEX-S7SE-0011-R11A-SM-2XCDD 50-59 years, male 1669.1
GTEX-1AX9I-0011-R11b-SM-7DHN4 60-69 years, male 1666.7
GTEX-12126-0011-R11a-SM-5BC6X 20-29 years, male 1652.7
GTEX-1HGF4-0011-R11a-SM-C1YRR 60-69 years, male 1648.5
GTEX-1GZHY-0011-R11a-SM-C1YRQ 50-59 years, female 1642.3
GTEX-X261-0011-R11A-SM-4E3JY 50-59 years, male 1638.9
GTEX-15DYW-0011-R11a-SM-6LPIT 60-69 years, female 1638.1
GTEX-T2IS-0011-R11A-SM-32QPC 20-29 years, female 1635.1
GTEX-13OW7-0011-R11a-SM-5O9DY 50-59 years, male 1634.5
GTEX-1GZ4I-0011-R11b-SM-9OSWR 50-59 years, male 1633.7
GTEX-1HFI6-0011-R11b-SM-A96RU 40-49 years, male 1633.7
GTEX-1GN73-0011-R11b-SM-9OSX4 60-69 years, male 1628.6
GTEX-1B8L1-0011-R11b-SM-793DJ 60-69 years, male 1625.0
GTEX-13X6I-0011-R11a-SM-5P9HN 60-69 years, male 1623.4
GTEX-13PLJ-0011-R11b-SM-5O9BS 60-69 years, female 1623.2
GTEX-11EMC-0011-R11b-SM-DNZZK 60-69 years, female 1621.6
GTEX-11WQC-0011-R11b-SM-57WD6 60-69 years, male 1618.0
GTEX-13VXU-0011-R11b-SM-5O9DJ 50-59 years, male 1617.5
GTEX-13JUV-0011-R11a-SM-5LZYH 40-49 years, female 1615.8
GTEX-1B8SF-0011-R11a-SM-79OOP 60-69 years, male 1610.5
GTEX-11DXY-0011-R11a-SM-DNZZN 60-69 years, male 1609.6
GTEX-1I1HK-0011-R11a-SM-B2LVN 60-69 years, male 1604.4
GTEX-12WSH-0011-R11a-SM-5LZVM 50-59 years, male 1603.8
GTEX-1H1DG-0011-R11a-SM-C1YQK 70-79 years, male 1602.0
GTEX-1HUB1-0011-R11b-SM-CE6SC 60-69 years, male 1597.4
GTEX-1H3VE-0011-R11b-SM-C1YRP 40-49 years, male 1596.6
GTEX-16NPV-0011-R11a-SM-7IGMK 50-59 years, female 1595.8
GTEX-13SLX-0011-R11b-SM-5O9C8 50-59 years, female 1593.9
GTEX-13OVH-0011-R11b-SM-5KM4X 70-79 years, male 1592.8
GTEX-1I1GS-0011-R11a-SM-C1YRU 60-69 years, male 1591.0
GTEX-WZTO-0011-R11A-SM-4E3K9 40-49 years, male 1579.5
GTEX-14C5O-0011-R11b-SM-6872H 60-69 years, male 1568.6
GTEX-18465-0011-R11a-SM-72D78 50-59 years, male 1559.3
GTEX-1GMRU-0011-R11b-SM-C1YQ4 50-59 years, male 1550.9
GTEX-YJ89-0011-R11a-SM-4SOKA 60-69 years, male 1536.2
GTEX-145LU-0011-R11b-SM-5P9JX 50-59 years, male 1533.9
GTEX-15ER7-0011-R11a-SM-6LPIL 20-29 years, female 1533.0
GTEX-1R9PO-0011-R11b-SM-EZ6NB 60-69 years, female 1532.8
GTEX-1IDJH-0011-R11b-SM-C1YRT 70-79 years, male 1526.1
GTEX-1IGQW-0011-R11a-SM-C1YRV 60-69 years, male 1523.8
GTEX-11EI6-0011-R11a-SM-DO11V 60-69 years, male 1523.4
GTEX-ZDXO-0011-R11a-SM-4WWD9 60-69 years, male 1518.1
GTEX-13X6K-0011-R11a-SM-5P9F5 60-69 years, female 1513.8
GTEX-1HCU6-0011-R11b-SM-AHZ2F 60-69 years, female 1513.5
GTEX-1I1GR-0011-R11a-SM-CM2T5 60-69 years, male 1508.9
GTEX-1N2EE-0011-R11b-SM-EXOIJ 60-69 years, male 1503.2
GTEX-1J8EW-0011-R11a-SM-AHZ37 60-69 years, female 1500.1
GTEX-13NYB-0011-R11a-SM-5KM3Q 40-49 years, male 1497.3
GTEX-1H3O1-0011-R11a-SM-A96RV 60-69 years, male 1495.1
GTEX-T5JC-0011-R11A-SM-32PMB 20-29 years, male 1490.7
GTEX-14E6D-0011-R11b-SM-664NP 50-59 years, male 1486.3
GTEX-1EMGI-0011-R11b-SM-9OSWX 60-69 years, male 1476.1
GTEX-ZUA1-0011-R11b-SM-51MTI 40-49 years, male 1471.1
GTEX-12WSE-0011-R11b-SM-5P9JW 20-29 years, male 1471.0
GTEX-1GTWX-0011-R11b-SM-C1YQJ 60-69 years, male 1468.8
GTEX-13FTY-0011-R11a-SM-5IJEA 40-49 years, female 1467.1
GTEX-13S7M-0011-R11b-SM-5P9HU 60-69 years, female 1463.4
GTEX-13CF2-0011-R11b-SM-5LZXO 60-69 years, male 1463.3
GTEX-13CZV-0011-R11b-SM-5N9FN 60-69 years, male 1458.3
GTEX-12WSM-0011-R11a-SM-5DUX8 60-69 years, male 1455.8
GTEX-13NZA-0011-R11b-SM-5KM4W 60-69 years, male 1449.6
GTEX-P44G-0011-R11A-SM-2I3FD 30-39 years, male 1447.3
GTEX-13OW6-0011-R11a-SM-5L3H2 50-59 years, male 1445.3
GTEX-17HII-0011-R11b-SM-7KFSX 50-59 years, male 1438.6
GTEX-1LVAO-0011-R11b-SM-EXOI8 60-69 years, male 1437.6
GTEX-11H98-0011-R11b-SM-5NQ6U 50-59 years, male 1429.0
GTEX-13QIC-0011-R11b-SM-5O9BU 60-69 years, female 1428.3
GTEX-1IL2V-0011-R11a-SM-ARU6T 70-79 years, male 1419.6
GTEX-13O3Q-0011-R11b-SM-5KM2W 50-59 years, male 1413.0
GTEX-1IL2U-0011-R11a-SM-CE6SO 60-69 years, male 1411.5
GTEX-1N2DW-0011-R11b-SM-EXOIL 50-59 years, male 1407.9
GTEX-1BAJH-0011-R11b-SM-7IGLM 70-79 years, male 1407.4
GTEX-13SLW-0011-R11a-SM-5SI8Q 70-79 years, male 1404.9
GTEX-1399T-0011-R11a-SM-5J2O1 60-69 years, male 1403.2
GTEX-13OW8-0011-R11a-SM-5L3GT 60-69 years, male 1403.2
GTEX-13N2G-0011-R11a-SM-5MR3F 60-69 years, male 1400.2
GTEX-1I19N-0011-R11b-SM-ARU6Y 70-79 years, male 1398.7
GTEX-ZE9C-0011-R11a-SM-4WKGG 60-69 years, male 1397.3
GTEX-1LSVX-0011-R11b-SM-EXOIA 60-69 years, male 1397.2
GTEX-1J1OQ-0011-R11a-SM-A96S3 40-49 years, female 1391.0
GTEX-13RTJ-0011-R11a-SM-5O9CK 60-69 years, male 1387.1
GTEX-ZVT3-0011-R11b-SM-57WBI 60-69 years, female 1386.0
GTEX-11OF3-0011-R11a-SM-57WCR 60-69 years, male 1378.3
GTEX-14ABY-0011-R11a-SM-5SI7C 50-59 years, male 1376.3
GTEX-YFC4-0011-R11a-SM-4SOK6 40-49 years, female 1373.1
GTEX-ZF28-0011-R11a-SM-4WWEI 60-69 years, male 1367.0
GTEX-13FHO-0011-R11b-SM-5LZYQ 60-69 years, male 1362.0
GTEX-1JMQJ-0011-R11a-SM-EXOJY 50-59 years, male 1360.9
GTEX-12WSF-0011-R11a-SM-5LZVT 70-79 years, male 1360.7
GTEX-17HG3-0011-R11b-SM-7KFT4 30-39 years, female 1350.0
GTEX-18464-0011-R11a-SM-72D76 50-59 years, male 1348.9
GTEX-13OVL-0011-R11b-SM-5L3G7 50-59 years, male 1348.2
GTEX-11PRG-0011-R11b-SM-DNZZY 50-59 years, male 1341.9
GTEX-1M4P7-0011-R11b-SM-EXOIK 60-69 years, male 1340.8
GTEX-1IKK5-0011-R11a-SM-C1YRX 60-69 years, male 1339.2
GTEX-131YS-0011-R11b-SM-5EGLM 60-69 years, female 1338.9
GTEX-NL3H-0011-R11A-SM-2I3E6 60-69 years, male 1338.8
GTEX-14DAQ-0011-R11a-SM-664NO 60-69 years, female 1334.0
GTEX-15G19-0011-R11b-SM-6LPIH 60-69 years, male 1333.8
GTEX-Y8DK-0011-R11A-SM-4SOK2 60-69 years, male 1330.5
GTEX-13OW5-0011-R11b-SM-5L3GG 60-69 years, male 1318.7
GTEX-Z93S-0011-R11a-SM-4RGNN 50-59 years, male 1317.6
GTEX-1H1ZS-0011-R11a-SM-C1YQM 70-79 years, male 1312.5
GTEX-13FHP-0011-R11b-SM-5LZXP 50-59 years, male 1311.6
GTEX-11DZ1-0011-R11b-SM-DO11W 50-59 years, male 1309.2
GTEX-1JMOU-0011-R11b-SM-EXUTA 60-69 years, female 1298.2
GTEX-Q2AG-0011-R11A-SM-2HMKZ 40-49 years, female 1293.2
GTEX-13PVQ-0011-R11a-SM-5O9DU 50-59 years, male 1292.2
GTEX-14BIN-0011-R11a-SM-5SI79 50-59 years, female 1285.3
GTEX-RVPV-0011-R11A-SM-2TF6F 60-69 years, male 1279.2
GTEX-OHPN-0011-R11A-SM-2I5FM 60-69 years, female 1272.8
GTEX-NPJ7-0011-R11A-SM-2I3E8 60-69 years, female 1253.9
GTEX-13JVG-0011-R11a-SM-5KM53 60-69 years, male 1244.6
GTEX-11GSP-0011-R11b-SM-5NQ7V 60-69 years, female 1240.1
GTEX-1H3NZ-0011-R11b-SM-CE6SF 60-69 years, male 1239.4
GTEX-1F48J-0011-R11b-SM-9OSWV 50-59 years, female 1235.9
GTEX-15EO6-0011-R11b-SM-6M47M 50-59 years, male 1233.9
GTEX-RU72-0011-R11A-SM-CM2U1 50-59 years, female 1225.0
GTEX-11TTK-0011-R11b-SM-DO112 60-69 years, female 1208.7
GTEX-17F97-0011-R11b-SM-7KFRQ 50-59 years, male 1208.6
GTEX-X4EP-0011-R11B-SM-4QASK 60-69 years, female 1190.6
GTEX-15DCD-0011-R11a-SM-D4P1R 70-79 years, female 1179.8
GTEX-WVLH-0011-R11A-SM-3MJFO 50-59 years, male 1176.4
GTEX-1IKOH-0011-R11a-SM-AHZ38 60-69 years, female 1156.0
GTEX-14BIM-0011-R11b-SM-5S2RN 60-69 years, female 1154.1
GTEX-NPJ8-0011-R11A-SM-2YUMS 40-49 years, male 1141.4
GTEX-T6MN-0011-R11A-SM-32QOX 50-59 years, male 1134.3
GTEX-QMR6-0011-R11A-SM-32PKK 50-59 years, male 1132.5
GTEX-R55E-0011-R11A-SM-2TC6I 20-29 years, male 1115.5
GTEX-1ICLZ-0011-R11a-SM-CJI3N 60-69 years, male 1111.2
GTEX-P44H-0011-R11A-SM-2XCER 40-49 years, male 1087.9
GTEX-XMD1-0011-R11A-SM-4AT5J 60-69 years, male 1082.0
GTEX-X4XX-0011-R11A-SM-46MWQ 60-69 years, male 1081.6
GTEX-12ZZX-0011-R11a-SM-5DUVJ 40-49 years, female 1071.6
GTEX-UTHO-0011-R11A-SM-3GIJE 60-69 years, male 1068.9
GTEX-1HB9E-0011-R11b-SM-ARU79 50-59 years, male 1053.7
GTEX-13OVJ-0011-R11a-SM-5P9H8 50-59 years, female 1044.3
GTEX-ZAB4-0011-R11a-SM-4SOKI 40-49 years, male 1044.1
GTEX-183WM-0011-R11a-SM-718A5 70-79 years, female 977.7
GTEX-TSE9-0011-R11A-SM-3DB7N 60-69 years, female 864.3
GTEX-145MI-0011-R11a-SM-5P9JZ 60-69 years, female 861.4
GTEX-QDT8-0011-R11A-SM-32PKD 30-39 years, female 816.9
Show allShow less
Brain - Cerebellum
Average nTPM: 1598.2
Samples: 241

Max nTPM: 3388.3
Min nTPM: 808.8
Std nTPM: 286.5
Median nTPM: 1600.2
GTEX-11OC5-0626-SM-5HL6M 60-69 years, male 3388.3
GTEX-16XZZ-2926-SM-6LPK4 60-69 years, male 3332.7
GTEX-1EH9U-3126-SM-7MXU5 60-69 years, male 2608.0
GTEX-1B996-2926-SM-7MXUH 60-69 years, male 2235.2
GTEX-1RQEC-3026-SM-DPRXM 60-69 years, male 2146.9
GTEX-13OW5-3126-SM-5MR3Y 60-69 years, male 2077.0
GTEX-1E1VI-2926-SM-7IGLT 50-59 years, male 2033.5
GTEX-15DYW-3026-SM-7KFRM 60-69 years, female 2032.5
GTEX-1313W-3026-SM-5LZUZ 50-59 years, female 2002.7
GTEX-11ONC-3026-SM-5985W 60-69 years, male 1991.9
GTEX-15ER7-3026-SM-6M47W 20-29 years, female 1985.3
GTEX-13OW7-2926-SM-5MR3Z 50-59 years, male 1965.2
GTEX-ZYFD-2926-SM-5GID9 50-59 years, male 1958.1
GTEX-1C6WA-3326-SM-7MKGN 60-69 years, male 1956.9
GTEX-11ZTS-3226-SM-5EGID 60-69 years, female 1954.4
GTEX-WHSE-2926-SM-3NMBG 20-29 years, male 1944.8
GTEX-1A3MX-2926-SM-718B7 60-69 years, male 1932.7
GTEX-1MJK2-3026-SM-EV7A5 50-59 years, male 1919.9
GTEX-13112-2926-SM-5DUWT 50-59 years, male 1913.4
GTEX-1E2YA-2926-SM-7MGWX 50-59 years, male 1904.6
GTEX-12ZZZ-3126-SM-5LZU6 60-69 years, male 1903.8
GTEX-1GZHY-3026-SM-7MXVA 50-59 years, female 1898.4
GTEX-17HG3-2826-SM-7EPGO 30-39 years, female 1895.1
GTEX-1GTWX-2926-SM-7MXV4 60-69 years, male 1888.2
GTEX-11DXY-3126-SM-5N9BT 60-69 years, male 1888.1
GTEX-16Z82-2926-SM-6LPJJ 60-69 years, male 1869.2
GTEX-Y111-2826-SM-4TT3O 50-59 years, male 1868.1
GTEX-1B8L1-3226-SM-7P8OX 60-69 years, male 1845.9
GTEX-131XH-2926-SM-5LZU4 50-59 years, male 1844.0
GTEX-11ZUS-2826-SM-5EQKW 30-39 years, male 1841.3
GTEX-1RDX4-3226-SM-DPS14 50-59 years, female 1841.1
GTEX-WWYW-3026-SM-3NB36 50-59 years, female 1834.0
GTEX-13G51-3126-SM-5IJG7 60-69 years, male 1832.2
GTEX-1F6IF-3026-SM-7P8QN 60-69 years, male 1831.4
GTEX-14E6D-2926-SM-664OP 50-59 years, male 1828.3
GTEX-12126-0926-SM-5FQTW 20-29 years, male 1827.5
GTEX-13FHO-2926-SM-5L3ES 60-69 years, male 1827.4
GTEX-14JIY-2326-SM-6AJAJ 60-69 years, male 1825.9
GTEX-1KD4Q-3026-SM-EV7A7 40-49 years, male 1823.4
GTEX-1GF9V-3026-SM-7P8R8 60-69 years, male 1815.4
GTEX-12WSD-3026-SM-5LZU7 60-69 years, female 1805.5
GTEX-17HII-2926-SM-79OMK 50-59 years, male 1802.5
GTEX-12WSM-2126-SM-5GCOC 60-69 years, male 1797.8
GTEX-1HBPI-2726-SM-9WPPF 50-59 years, male 1793.7
GTEX-16YQH-2926-SM-6LPJE 30-39 years, male 1792.8
GTEX-T6MN-2526-SM-32PMN 50-59 years, male 1791.7
GTEX-1NV8Z-3026-SM-DTX8Z 60-69 years, male 1786.1
GTEX-1GN73-3026-SM-7MXV8 60-69 years, male 1782.7
GTEX-1F6I4-3026-SM-7P8SI 60-69 years, male 1780.4
GTEX-1PIIG-2826-SM-DTX7O 30-39 years, male 1779.4
GTEX-1JJ6O-3026-SM-C1YQH 60-69 years, male 1779.0
GTEX-1BAJH-3126-SM-7MGXY 70-79 years, male 1775.4
GTEX-1CB4G-2926-SM-7MKFQ 60-69 years, male 1774.1
GTEX-13OVL-3026-SM-5IJF1 50-59 years, male 1773.6
GTEX-14PJO-2926-SM-686ZI 60-69 years, male 1771.9
GTEX-13O3O-3026-SM-5KM42 60-69 years, female 1770.2
GTEX-1C64N-3126-SM-79OO3 50-59 years, male 1759.1
GTEX-131YS-3026-SM-5EGHY 60-69 years, female 1754.9
GTEX-1H1DG-2826-SM-9JGHB 70-79 years, male 1750.6
GTEX-N7MS-2526-SM-2D7W3 60-69 years, male 1747.4
GTEX-11EMC-3326-SM-5P9JH 60-69 years, female 1743.6
GTEX-139TT-2626-SM-5LZUB 60-69 years, male 1741.5
GTEX-13FXS-3026-SM-5LZYO 50-59 years, male 1737.2
GTEX-1I1GV-3026-SM-CNNR9 60-69 years, male 1731.6
GTEX-R55E-2526-SM-2TC6H 20-29 years, male 1729.7
GTEX-14BMV-2926-SM-5TDEE 50-59 years, male 1729.1
GTEX-14E7W-2926-SM-5S2R8 70-79 years, male 1727.6
GTEX-144GL-2926-SM-5O99F 50-59 years, male 1724.7
GTEX-13X6K-2826-SM-5O9DS 60-69 years, female 1720.7
GTEX-13VXU-3026-SM-5LU3K 50-59 years, male 1716.8
GTEX-13FHP-2926-SM-5IJG9 50-59 years, male 1716.6
GTEX-1F75A-2926-SM-7MXVN 50-59 years, male 1716.1
GTEX-1RNSC-3126-SM-EVR4V 60-69 years, male 1715.3
GTEX-1HBPH-3026-SM-9WPNY 40-49 years, female 1714.7
GTEX-WL46-2826-SM-3LK81 50-59 years, male 1713.0
GTEX-1EU9M-2926-SM-793DF 60-69 years, male 1711.8
GTEX-ZYY3-3026-SM-5GIEJ 60-69 years, female 1710.9
GTEX-1399T-3126-SM-5IJFS 60-69 years, male 1707.9
GTEX-145MF-2826-SM-7EPGU 50-59 years, male 1700.9
GTEX-11O72-2826-SM-5HL6W 40-49 years, male 1691.2
GTEX-11GSO-3026-SM-5Q5AL 60-69 years, male 1689.8
GTEX-1EWIQ-3026-SM-7IGOJ 70-79 years, female 1685.6
GTEX-X261-3126-SM-4PQZC 50-59 years, male 1684.9
GTEX-11EI6-2926-SM-5985U 60-69 years, male 1683.5
GTEX-ZDXO-2926-SM-4WKFM 60-69 years, male 1669.8
GTEX-S7SE-2526-SM-2XCDL 50-59 years, male 1669.5
GTEX-1EMGI-3126-SM-7MXUR 60-69 years, male 1668.1
GTEX-15SHU-3026-SM-6LPIB 40-49 years, female 1662.7
GTEX-1JJE9-3026-SM-CNNPA 70-79 years, male 1660.4
GTEX-YJ89-2926-SM-5P9IT 60-69 years, male 1660.0
GTEX-ZAK1-2926-SM-5HL9S 50-59 years, female 1658.1
GTEX-1I1CD-2926-SM-A96SJ 60-69 years, female 1657.7
GTEX-WVLH-2926-SM-3MJG5 50-59 years, male 1654.4
GTEX-1H3VE-2826-SM-9WPOL 40-49 years, male 1653.4
GTEX-1IKOH-2826-SM-CNNRC 60-69 years, female 1650.5
GTEX-12WSH-3126-SM-5LZW8 50-59 years, male 1645.7
GTEX-1LSVX-2826-SM-EVR58 60-69 years, male 1643.8
GTEX-13OVH-2926-SM-5IJFH 70-79 years, male 1643.7
GTEX-1C6VR-3026-SM-7IGLW 60-69 years, male 1643.6
GTEX-1H4P4-2726-SM-9JGGB 50-59 years, male 1642.4
GTEX-14JG1-2926-SM-686ZK 40-49 years, male 1642.0
GTEX-1F75W-3126-SM-7P8SJ 60-69 years, male 1641.3
GTEX-14A5I-2826-SM-5SIBF 50-59 years, female 1640.1
GTEX-1F48J-2726-SM-7P8PW 50-59 years, female 1637.4
GTEX-1HSKV-2926-SM-B2LWJ 60-69 years, male 1633.8
GTEX-1HB9E-3126-SM-AHZ4M 50-59 years, male 1632.9
GTEX-13SLX-3226-SM-5YYA6 50-59 years, female 1631.8
GTEX-ZUA1-2926-SM-59HL3 40-49 years, male 1630.3
GTEX-13RTJ-3126-SM-5S2Q4 60-69 years, male 1629.8
GTEX-139TS-3126-SM-5LZWX 60-69 years, male 1627.8
GTEX-1H1ZS-2926-SM-9WPP2 70-79 years, male 1625.4
GTEX-1HCVE-2926-SM-9WPPJ 50-59 years, male 1622.9
GTEX-1H1CY-3026-SM-9OSW7 60-69 years, female 1619.1
GTEX-14C5O-2926-SM-5RQI1 60-69 years, male 1617.9
GTEX-1192X-3226-SM-5987D 50-59 years, male 1615.7
GTEX-11GSP-3126-SM-5A5LL 60-69 years, female 1614.3
GTEX-1GF9W-2726-SM-9JGGW 60-69 years, male 1610.0
GTEX-145MH-2926-SM-5Q5D2 50-59 years, male 1605.3
GTEX-117XS-3126-SM-5GIDP 60-69 years, male 1604.9
GTEX-147F4-3026-SM-5Q5BJ 50-59 years, male 1600.5
GTEX-1PWST-3026-SM-EAZ3H 70-79 years, male 1600.2
GTEX-14PJM-3026-SM-6LLHM 50-59 years, female 1597.4
GTEX-12ZZY-2926-SM-5DUXO 60-69 years, male 1590.5
GTEX-14C39-3026-SM-5S2QE 40-49 years, male 1587.2
GTEX-111FC-3326-SM-5GZYV 60-69 years, male 1587.0
GTEX-15G19-2826-SM-6M48K 60-69 years, male 1580.8
GTEX-11NUK-3026-SM-5986K 50-59 years, male 1580.5
GTEX-1R46S-3126-SM-DPRZ9 60-69 years, female 1578.9
GTEX-18A6Q-2826-SM-7LTAO 60-69 years, male 1576.9
GTEX-1128S-2826-SM-5N9DI 60-69 years, female 1570.7
GTEX-14PN4-3026-SM-664O4 50-59 years, male 1569.8
GTEX-1JMPZ-2826-SM-C1YRA 30-39 years, male 1567.1
GTEX-12WSC-2926-SM-5BC5Z 50-59 years, male 1565.6
GTEX-11DXW-1026-SM-5H11K 40-49 years, male 1554.8
GTEX-12WSE-2926-SM-5RQJ9 20-29 years, male 1552.6
GTEX-13NYB-3226-SM-5J2ND 40-49 years, male 1550.9
GTEX-14DAQ-3026-SM-5S2QZ 60-69 years, female 1550.8
GTEX-145MG-3126-SM-5Q5D3 50-59 years, male 1546.9
GTEX-1H3O1-1826-SM-A96TO 60-69 years, male 1539.3
GTEX-1I1HK-2726-SM-AHZ2M 60-69 years, male 1538.6
GTEX-T2IS-2926-SM-32QPO 20-29 years, female 1537.9
GTEX-14JFF-2826-SM-6871Q 60-69 years, male 1536.1
GTEX-1POEN-2726-SM-E9U6B 30-39 years, female 1532.5
GTEX-RU72-2926-SM-2TF66 50-59 years, female 1528.3
GTEX-14ABY-3026-SM-664NE 50-59 years, male 1526.3
GTEX-1269C-3126-SM-5EGI6 60-69 years, female 1526.0
GTEX-1EKGG-3126-SM-9WPO5 60-69 years, male 1521.3
GTEX-1KANB-3226-SM-D4P3G 50-59 years, male 1518.2
GTEX-1JMQJ-3126-SM-EV79G 50-59 years, male 1510.9
GTEX-18465-2926-SM-7KFSE 50-59 years, male 1509.8
GTEX-11ZVC-3026-SM-59HJM 50-59 years, female 1505.9
GTEX-1B8SG-1926-SM-73KUB 50-59 years, male 1505.5
GTEX-Y8DK-0726-SM-4TT3S 60-69 years, male 1504.7
GTEX-1JMLX-3026-SM-EV79Q 50-59 years, male 1503.2
GTEX-RNOR-2226-SM-2TF5O 50-59 years, female 1502.2
GTEX-145LU-2626-SM-5LU9Z 50-59 years, male 1496.1
GTEX-13QIC-3026-SM-5LU58 60-69 years, female 1491.7
GTEX-1B8SF-3026-SM-731DX 60-69 years, male 1486.1
GTEX-1JJEA-2926-SM-C1YSK 60-69 years, male 1484.6
GTEX-YFC4-3026-SM-5IFJK 40-49 years, female 1484.1
GTEX-17EVP-2926-SM-793BU 40-49 years, male 1478.2
GTEX-X4EP-3026-SM-3P5YP 60-69 years, female 1474.3
GTEX-1IL2V-3026-SM-CYPSA 70-79 years, male 1472.1
GTEX-17F97-2926-SM-7DUEQ 50-59 years, male 1470.8
GTEX-XLM4-2926-SM-4AT59 60-69 years, male 1463.5
GTEX-1B933-3026-SM-731DB 50-59 years, female 1459.6
GTEX-ZF28-2926-SM-4WKG1 60-69 years, male 1459.6
GTEX-1LG7Y-3126-SM-EV7AS 50-59 years, male 1455.1
GTEX-ZAB4-2926-SM-57WCV 40-49 years, male 1450.8
GTEX-13O3Q-3026-SM-5IJGD 50-59 years, male 1444.7
GTEX-17HHY-2926-SM-79OJW 50-59 years, male 1444.5
GTEX-P44G-2526-SM-2I5EK 30-39 years, male 1439.5
GTEX-11TTK-2826-SM-5GU5K 60-69 years, female 1438.8
GTEX-13N2G-3126-SM-5IJGL 60-69 years, male 1438.6
GTEX-WZTO-2826-SM-3NM8P 40-49 years, male 1433.1
GTEX-T5JC-2326-SM-32PMR 20-29 years, male 1431.9
GTEX-17JCI-3026-SM-7EWDR 60-69 years, female 1427.9
GTEX-13CF2-3026-SM-5IFFX 60-69 years, male 1422.9
GTEX-13JUV-3026-SM-5K7WX 40-49 years, female 1421.1
GTEX-1EX96-3126-SM-9JGGC 50-59 years, male 1421.0
GTEX-ZAJG-3026-SM-5HL92 50-59 years, female 1419.4
GTEX-XMD1-2826-SM-4AT5F 60-69 years, male 1418.4
GTEX-1A8G7-3026-SM-73KTT 60-69 years, male 1413.4
GTEX-1QP6S-3026-SM-EAZ4N 40-49 years, male 1412.6
GTEX-1KWVE-2226-SM-CXZKN 30-39 years, male 1409.4
GTEX-ZVT3-2926-SM-5GU6M 60-69 years, female 1408.9
GTEX-147GR-3126-SM-5S2PM 60-69 years, male 1406.7
GTEX-13OVJ-2726-SM-5IJG6 50-59 years, female 1403.7
GTEX-1QEPI-3026-SM-EXOIW 60-69 years, female 1401.6
GTEX-13OW6-2926-SM-5KM29 50-59 years, male 1401.0
GTEX-UTHO-2926-SM-3P5Z9 60-69 years, male 1398.8
GTEX-1IY9M-3126-SM-AHZ3A 60-69 years, male 1391.2
GTEX-1IDJH-3126-SM-C1YQS 70-79 years, male 1389.0
GTEX-13OW8-2926-SM-5L3FV 60-69 years, male 1386.2
GTEX-13PVQ-2926-SM-5L3HJ 50-59 years, male 1382.3
GTEX-1JN1M-3126-SM-AHZ4E 60-69 years, female 1380.0
GTEX-11DYG-2926-SM-5H132 60-69 years, male 1377.0
GTEX-145LS-3026-SM-5O99S 60-69 years, female 1372.1
GTEX-1F52S-3026-SM-7P8PV 60-69 years, female 1370.3
GTEX-14ASI-2926-SM-5Q5DG 60-69 years, male 1361.7
GTEX-PWO3-1026-SM-2I5F2 60-69 years, female 1359.4
GTEX-1GZ2Q-3026-SM-9JGG3 40-49 years, male 1358.8
GTEX-Z93S-2826-SM-57WBL 50-59 years, male 1350.5
GTEX-1GZ4I-2926-SM-9JGGO 50-59 years, male 1343.6
GTEX-1A8G6-3126-SM-731D8 60-69 years, male 1343.5
GTEX-14BIN-3326-SM-5Q5E6 50-59 years, female 1340.3
GTEX-17EVQ-2726-SM-7EWDT 70-79 years, male 1339.7
GTEX-11DZ1-2926-SM-5A5KI 50-59 years, male 1332.3
GTEX-OHPN-2626-SM-2I5H1 60-69 years, female 1331.1
GTEX-14BIM-3126-SM-5Q5C7 60-69 years, female 1328.8
GTEX-N7MT-1226-SM-DKPOK 60-69 years, female 1321.4
GTEX-1R9PO-2826-SM-E6CPV 60-69 years, female 1317.1
GTEX-13S7M-3026-SM-5S2QQ 60-69 years, female 1309.7
GTEX-NPJ8-2626-SM-2D7W2 40-49 years, male 1308.7
GTEX-NPJ7-2826-SM-2I3FU 60-69 years, female 1306.7
GTEX-1JMQK-2926-SM-D4P2T 60-69 years, male 1303.8
GTEX-132Q8-2926-SM-5IFFP 60-69 years, male 1293.8
GTEX-15EO6-2926-SM-6M48D 50-59 years, male 1289.4
GTEX-13X6I-2926-SM-5Q5C3 60-69 years, male 1284.1
GTEX-PVOW-2626-SM-32PL8 40-49 years, male 1278.0
GTEX-QMR6-1326-SM-32PLB 50-59 years, male 1272.2
GTEX-1JMOU-2826-SM-EV79R 60-69 years, female 1264.0
GTEX-QVJO-1325-SM-2S1QX 60-69 years, female 1244.9
GTEX-13JVG-3226-SM-5IJGJ 60-69 years, male 1235.7
GTEX-11NV4-2226-SM-5BC4T 60-69 years, male 1230.4
GTEX-X4XX-2926-SM-3NMB1 60-69 years, male 1229.8
GTEX-1J1OQ-3126-SM-D4P2O 40-49 years, female 1223.6
GTEX-183WM-2726-SM-7KFRF 70-79 years, female 1220.1
GTEX-1P4AB-3026-SM-EXOJS 50-59 years, male 1215.2
GTEX-ZZPT-2926-SM-5EQ5S 50-59 years, male 1205.6
GTEX-11PRG-2826-SM-5BC54 50-59 years, male 1204.4
GTEX-1CB4H-3026-SM-79OLX 60-69 years, female 1198.4
GTEX-Q2AG-2826-SM-2HMJQ 40-49 years, female 1185.3
GTEX-1HSMO-2926-SM-C1YR5 60-69 years, male 1166.5
GTEX-13X6J-2926-SM-7EPGP 50-59 years, male 1163.6
GTEX-P44H-2426-SM-2XCEJ 40-49 years, male 1084.7
GTEX-12ZZX-2826-SM-5BC6K 40-49 years, female 1067.5
GTEX-TSE9-2926-SM-3DB77 60-69 years, female 1038.7
GTEX-QVUS-2926-SM-3GIJB 60-69 years, female 1028.5
GTEX-QDT8-3026-SM-32PKB 30-39 years, female 999.4
GTEX-1H3NZ-2926-SM-9WPQ8 60-69 years, male 808.8
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CEREBELLUM - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

1352.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Cerebellum
Scaled Tags Per Million: 1352.8
FF:10083-102B2 22-68 years, mixed 2124.6
FF:10166-103B4 76 years, female 580.9

CEREBELLUM - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1455.5
Pig sample Sample description nTPM
Cerebellum
nTPM: 1455.5
Samples: 4

Max nTPM: 2515.0
Min nTPM: 983.7
Sample A Female 2515.0
Sample B Female 1253.0
Sample C Male 983.7
Sample D Male 1070.1

CEREBELLUM - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

2548.7
Mouse sample Sample description nTPM
Cerebellum
nTPM: 2548.8
Samples: 4

Max nTPM: 2690.1
Min nTPM: 2397.2
Sample A Male 2565.4
Sample B Male 2397.2
Sample C Female 2690.1
Sample D Female 2542.3

CEREBELLUM - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

28.1
Allen experiment id Experiment description Expression energy
Cerebellum
Expression energy: 28.1
70276861 Antisense, RP_050531_01_D11, Mouse strain C57BL/6J (56 days, male) 28.1

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