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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
2288.7
nTPM
FANTOM5:
3737.5
Scaled Tags Per Million
Pig:
2763.0
nTPM
Allen mouse:
18.1
Expression energy
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
2288.7
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 1654.4
2301
Female, age 85, both hemispheres
1787.6
2188
Female, age 91, both hemispheres
1717.8
2090
Male, age 80, both hemispheres
1641.2
1984
Male, age 76, both hemispheres
1470.9
Dorsal cochlear nucleus nTPM: 1724.0
2187
Female, age 91, both hemispheres
1876.5
2802
Male, age 74, right hemisphere
1871.0
2058
Male, age 76, both hemispheres
1796.6
2370
Male, age 61, both hemispheres
1613.0
2378
Male, age 80, both hemispheres
1463.0
Dorsal tegmental nucleus nTPM: 1975.9
2358
Male, age 61, both hemispheres
2342.9
2083
Male, age 80, both hemispheres
2193.8
2326
Male, age 74, both hemispheres
1796.9
1936
Male, age 76, left hemisphere
1570.1
Dorsolateral tegmental area nTPM: 1831.3
2337
Male, age 61, both hemispheres
2045.2
2751
Female, age 85, both hemispheres
1983.2
2654
Male, age 80, both hemispheres
1932.5
2141
Male, age 76, both hemispheres
1617.6
2360
Male, age 74, both hemispheres
1577.9
Kolliker-Fuse nucleus nTPM: 2094.0
2163
Male, age 80, both hemispheres
2377.2
2315
Male, age 76, right hemisphere
2072.3
2793
Female, age 91, left hemisphere
1832.6
Lateral lemniscal nuclei nTPM: 1863.0
2036
Male, age 80, both hemispheres
2202.3
2169
Male, age 76, both hemispheres
2157.2
2746
Female, age 85, left hemisphere
1864.1
2453
Male, age 74, right hemisphere
1678.6
2320
Female, age 91, left hemisphere
1412.9
Lateral parabrachial nucleus nTPM: 1935.4
2139
Female, age 85, right hemisphere
2307.3
2790
Male, age 61, both hemispheres
1842.6
2013
Male, age 80, both hemispheres
1833.7
2792
Male, age 76, both hemispheres
1758.0
Lateral vestibular nucleus nTPM: 2071.0
2184
Male, age 76, both hemispheres
2304.2
2311
Male, age 80, both hemispheres
1837.8
Locus coeruleus nTPM: 2288.7
2123
Female, age 91, both hemispheres
3014.0
2720
Male, age 74, both hemispheres
2527.6
2014
Male, age 55, unknown
2409.9
2788
Male, age 74, unknown
2125.1
2317
Female, age 72, unknown
2048.2
2162
Male, age 80, both hemispheres
1974.8
1980
Male, age 76, both hemispheres
1921.0
Medial parabrachial nucleus nTPM: 2021.0
2170
Female, age 91, both hemispheres
2461.9
2854
Male, age 80, both hemispheres
2175.7
2156
Male, age 61, both hemispheres
1989.9
2786
Male, age 76, both hemispheres
1753.5
2463
Female, age 85, right hemisphere
1723.9
Medial periolivary nuclei nTPM: 1898.2
2171
Female, age 85, both hemispheres
2438.7
2063
Male, age 76, both hemispheres
2104.1
2791
Male, age 74, right hemisphere
2022.3
2081
Male, age 80, both hemispheres
1560.9
2458
Female, age 91, both hemispheres
1365.1
Motor facial nucleus nTPM: 1924.4
2365
Male, age 74, right hemisphere
2257.8
2062
Male, age 76, both hemispheres
2224.1
2697
Female, age 85, both hemispheres
1888.4
2126
Male, age 61, both hemispheres
1753.9
2795
Female, age 91, both hemispheres
1752.4
2327
Male, age 80, both hemispheres
1670.0
Motor trigeminal nucleus nTPM: 1677.4
2335
Male, age 61, both hemispheres
1927.7
2079
Male, age 80, both hemispheres
1882.7
2560
Male, age 74, both hemispheres
1624.5
2309
Male, age 76, both hemispheres
1564.0
2321
Female, age 91, both hemispheres
1388.1
Nuclei of the trapezoid body nTPM: 2035.7
2159
Male, age 61, both hemispheres
2426.5
2735
Female, age 85, both hemispheres
2310.2
1983
Male, age 76, both hemispheres
2242.7
2166
Male, age 80, both hemispheres
1808.9
2368
Female, age 91, both hemispheres
1390.4
Nucleus raphe magnus nTPM: 2077.8
2160
Male, age 61, both hemispheres
2612.4
2172
Female, age 85, both hemispheres
2458.0
2455
Male, age 74, both hemispheres
2151.9
2051
Male, age 76, both hemispheres
1926.6
2328
Male, age 80, both hemispheres
1840.6
2459
Female, age 91, both hemispheres
1477.3
Paramedian reticular nucleus nTPM: 2057.6
2050
Female, age 85, both hemispheres
2356.2
2057
Male, age 80, both hemispheres
2099.6
2313
Male, age 61, both hemispheres
2087.1
2052
Male, age 76, both hemispheres
1687.5
Pedunculopontine tegmental nucleus nTPM: 2018.9
2338
Male, age 61, both hemispheres
2285.8
2334
Male, age 80, both hemispheres
2021.0
1921
Female, age 85, both hemispheres
1749.9
Pontine nuclei nTPM: 2165.2
2787
Female, age 85, both hemispheres
2889.7
1863
Male, age 55, unknown
2818.1
2727
Male, age 61, right hemisphere
2334.6
2109
Female, age 72, unknown
2237.7
1968
Male, age 76, left hemisphere
1981.7
2454
Male, age 74, left hemisphere
1777.7
2115
Male, age 80, left hemisphere
1686.8
2319
Female, age 91, both hemispheres
1595.6
Pontine raphe nucleus nTPM: 1967.0
2122
Female, age 85, midline
2114.0
2853
Male, age 76, midline
1820.0
Posteroventral cochlear nucleus nTPM: 1743.7
2752
Female, age 85, both hemispheres
1989.3
2341
Male, age 80, both hemispheres
1798.4
2070
Male, age 76, both hemispheres
1752.4
2371
Male, age 61, both hemispheres
1640.0
2135
Female, age 91, both hemispheres
1538.4
Principal sensory trigeminal nucleus nTPM: 1952.1
2158
Male, age 61, both hemispheres
2373.5
2324
Male, age 76, both hemispheres
2017.8
2008
Male, age 80, left hemisphere
1931.4
2367
Female, age 91, left hemisphere
1485.7
Reticular pontine nucleus, caudal nTPM: 1709.8
2092
Male, age 76, both hemispheres
1955.2
2332
Male, age 80, right hemisphere
1880.3
2559
Male, age 74, both hemispheres
1600.8
2457
Female, age 91, both hemispheres
1403.1
Reticular pontine nucleus, oral nTPM: 1914.3
1939
Male, age 80, both hemispheres
2183.3
2167
Male, age 76, both hemispheres
2066.3
2012
Female, age 85, both hemispheres
2003.7
2361
Male, age 74, both hemispheres
1764.0
2366
Female, age 91, both hemispheres
1554.2
Reticulotegmental nucleus nTPM: 1894.8
2325
Male, age 76, both hemispheres
2061.5
2322
Female, age 91, both hemispheres
1940.6
2333
Male, age 80, both hemispheres
1874.0
2452
Male, age 74, both hemispheres
1703.0
Spinal trigeminal nucleus, oral nTPM: 1788.9
2164
Male, age 80, both hemispheres
2051.2
2737
Female, age 85, both hemispheres
1890.4
1978
Male, age 76, both hemispheres
1425.0
Subcoeruleus area nTPM: 1858.1
1958
Male, age 80, both hemispheres
2075.7
2323
Female, age 91, left hemisphere
2071.5
2369
Female, age 85, left hemisphere
1918.2
2451
Male, age 74, both hemispheres
1624.1
2089
Male, age 76, left hemisphere
1600.8
Superior olive nTPM: 1856.8
1875
Female, age 85, both hemispheres
2184.0
2364
Male, age 74, right hemisphere
2150.7
2020
Male, age 76, both hemispheres
1767.4
2329
Male, age 80, right hemisphere
1688.5
2561
Female, age 91, both hemispheres
1493.4
Ventral periolivary nuclei nTPM: 1941.2
2130
Female, age 85, both hemispheres
2357.3
2165
Male, age 80, both hemispheres
2307.3
2023
Male, age 76, both hemispheres
1680.9
2794
Female, age 91, left hemisphere
1419.1
Ventrolateral tegmental area, A5 NE cell group nTPM: 1877.4
2359
Male, age 61, both hemispheres
2256.2
2840
Female, age 85, both hemispheres
2140.6
2449
Male, age 74, both hemispheres
1931.4
1959
Male, age 76, both hemispheres
1887.6
2161
Male, age 80, both hemispheres
1755.8
2456
Female, age 91, both hemispheres
1293.0
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
2763.0
Pig sample
Sample description
nTPM
Pons nTPM: 2763.0
Samples: 4
Max nTPM: 3266.2
Min nTPM: 2148.2
Sample A
Female
3266.2
Sample B
Female
2148.2
Sample C
Male
2487.7
Sample D
Male
3149.9
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.
The Human Protein Atlas project is funded
