PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:2312.1 nTPM
FANTOM5:3737.5 Scaled Tags Per Million
Pig:2763.0 nTPM
Mouse:2749.9 nTPM
Allen mouse:19.7 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 2312.1
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 1654.4
2301 Female, age 85, both hemispheres 1787.6
2188 Female, age 91, both hemispheres 1717.8
2090 Male, age 80, both hemispheres 1641.2
1984 Male, age 76, both hemispheres 1470.9
Area postrema
nTPM: 1854.4
2799 Male, age 61, both hemispheres 2133.0
2054 Male, age 76, both hemispheres 1998.9
2306 Male, age 80, both hemispheres 1431.4
Dorsal cochlear nucleus
nTPM: 1724.0
2187 Female, age 91, both hemispheres 1876.5
2802 Male, age 74, right hemisphere 1871.0
2058 Male, age 76, both hemispheres 1796.6
2370 Male, age 61, both hemispheres 1613.0
2378 Male, age 80, both hemispheres 1463.0
Dorsal medullary reticular nucleus
nTPM: 1763.2
2040 Female, age 85, both hemispheres 2299.3
2088 Male, age 76, both hemispheres 1516.9
2373 Male, age 61, both hemispheres 1473.5
Dorsal motor vagal complex
nTPM: 1764.4
2133 Female, age 91, both hemispheres 2179.6
2000 Male, age 74, unknown 2058.8
2844 Male, age 55, unknown 1832.0
2797 Male, age 61, both hemispheres 1812.6
2813 Female, age 72, unknown 1801.6
2643 Male, age 74, both hemispheres 1749.8
2185 Male, age 76, both hemispheres 1633.3
2807 Female, age 85, both hemispheres 1047.9
Dorsal tegmental nucleus
nTPM: 1975.9
2358 Male, age 61, both hemispheres 2342.9
2083 Male, age 80, both hemispheres 2193.8
2326 Male, age 74, both hemispheres 1796.9
1936 Male, age 76, left hemisphere 1570.1
Dorsolateral tegmental area
nTPM: 1831.3
2337 Male, age 61, both hemispheres 2045.2
2751 Female, age 85, both hemispheres 1983.2
2654 Male, age 80, both hemispheres 1932.5
2141 Male, age 76, both hemispheres 1617.6
2360 Male, age 74, both hemispheres 1577.9
Gigantocellular reticular nuclei, medullary
nTPM: 1766.6
2462 Male, age 74, both hemispheres 1959.5
2314 Male, age 61, both hemispheres 1889.7
1876 Female, age 85, both hemispheres 1868.6
2022 Male, age 76, right hemisphere 1676.2
2310 Male, age 80, both hemispheres 1663.2
2387 Female, age 91, both hemispheres 1542.6
Gigantocellular reticular nuclei, pars
nTPM: 1805.3
2084 Female, age 85, both hemispheres 2025.4
2168 Male, age 76, both hemispheres 1972.1
2336 Male, age 61, both hemispheres 1859.5
2706 Male, age 80, both hemispheres 1586.4
2330 Male, age 80, both hemispheres 1582.9
Inferior olive
nTPM: 2004.5
2563 Male, age 74, both hemispheres 2561.6
2085 Female, age 85, both hemispheres 2264.4
2628 Female, age 91, both hemispheres 1986.5
2178 Male, age 61, both hemispheres 1660.8
2379 Male, age 80, both hemispheres 1549.0
Kolliker-Fuse nucleus
nTPM: 2094.0
2163 Male, age 80, both hemispheres 2377.2
2315 Male, age 76, right hemisphere 2072.3
2793 Female, age 91, left hemisphere 1832.6
Lateral lemniscal nuclei
nTPM: 1863.0
2036 Male, age 80, both hemispheres 2202.3
2169 Male, age 76, both hemispheres 2157.2
2746 Female, age 85, left hemisphere 1864.1
2453 Male, age 74, right hemisphere 1678.6
2320 Female, age 91, left hemisphere 1412.9
Lateral medullary reticular nucleus
nTPM: 2039.2
2044 Male, age 76, both hemispheres 2425.1
2305 Male, age 74, both hemispheres 2210.2
2804 Female, age 91, both hemispheres 1970.2
2374 Male, age 61, both hemispheres 1960.9
2190 Female, age 85, both hemispheres 1902.7
2852 Male, age 80, both hemispheres 1765.8
Lateral parabrachial nucleus
nTPM: 1935.4
2139 Female, age 85, right hemisphere 2307.3
2790 Male, age 61, both hemispheres 1842.6
2013 Male, age 80, both hemispheres 1833.7
2792 Male, age 76, both hemispheres 1758.0
Lateral vestibular nucleus
nTPM: 2071.0
2184 Male, age 76, both hemispheres 2304.2
2311 Male, age 80, both hemispheres 1837.8
Locus coeruleus
nTPM: 2288.7
2123 Female, age 91, both hemispheres 3014.0
2720 Male, age 74, both hemispheres 2527.6
2014 Male, age 55, unknown 2409.9
2788 Male, age 74, unknown 2125.1
2317 Female, age 72, unknown 2048.2
2162 Male, age 80, both hemispheres 1974.8
1980 Male, age 76, both hemispheres 1921.0
Medial olivary nucleus
nTPM: 1856.2
2138 Female, age 91, both hemispheres 1990.9
1962 Male, age 76, both hemispheres 1952.0
1943 Male, age 61, both hemispheres 1765.3
2851 Male, age 80, both hemispheres 1716.6
Medial parabrachial nucleus
nTPM: 2021.0
2170 Female, age 91, both hemispheres 2461.9
2854 Male, age 80, both hemispheres 2175.7
2156 Male, age 61, both hemispheres 1989.9
2786 Male, age 76, both hemispheres 1753.5
2463 Female, age 85, right hemisphere 1723.9
Medial periolivary nuclei
nTPM: 1898.2
2171 Female, age 85, both hemispheres 2438.7
2063 Male, age 76, both hemispheres 2104.1
2791 Male, age 74, right hemisphere 2022.3
2081 Male, age 80, both hemispheres 1560.9
2458 Female, age 91, both hemispheres 1365.1
Medial vestibular nucleus
nTPM: 2230.2
2624 Male, age 61, both hemispheres 2587.9
2801 Male, age 74, both hemispheres 2422.6
2803 Female, age 91, both hemispheres 2167.7
2134 Male, age 76, both hemispheres 2117.7
2093 Male, age 80, both hemispheres 2075.7
2743 Female, age 85, both hemispheres 2009.5
Motor facial nucleus
nTPM: 1924.4
2365 Male, age 74, right hemisphere 2257.8
2062 Male, age 76, both hemispheres 2224.1
2697 Female, age 85, both hemispheres 1888.4
2126 Male, age 61, both hemispheres 1753.9
2795 Female, age 91, both hemispheres 1752.4
2327 Male, age 80, both hemispheres 1670.0
Motor hypoglossal nucleus
nTPM: 1957.9
2461 Male, age 61, both hemispheres 2262.6
2125 Female, age 91, both hemispheres 2203.8
2132 Female, age 85, both hemispheres 1935.6
2182 Male, age 80, both hemispheres 1778.1
2277 Male, age 76, both hemispheres 1609.4
Motor trigeminal nucleus
nTPM: 1677.4
2335 Male, age 61, both hemispheres 1927.7
2079 Male, age 80, both hemispheres 1882.7
2560 Male, age 74, both hemispheres 1624.5
2309 Male, age 76, both hemispheres 1564.0
2321 Female, age 91, both hemispheres 1388.1
Nuclei of the trapezoid body
nTPM: 2035.7
2159 Male, age 61, both hemispheres 2426.5
2735 Female, age 85, both hemispheres 2310.2
1983 Male, age 76, both hemispheres 2242.7
2166 Male, age 80, both hemispheres 1808.9
2368 Female, age 91, both hemispheres 1390.4
Nucleus ambiguus
nTPM: 1884.7
2071 Male, age 76, both hemispheres 1914.7
2096 Female, age 85, both hemispheres 1854.6
Nucleus cuneatus
nTPM: 1616.0
2564 Male, age 74, both hemispheres 2049.9
2131 Male, age 76, both hemispheres 1832.9
2100 Male, age 76, both hemispheres 1714.5
2376 Male, age 61, both hemispheres 1656.5
2562 Male, age 61, both hemispheres 1650.6
2808 Female, age 85, both hemispheres 1502.9
2380 Male, age 80, both hemispheres 1417.0
2381 Male, age 80, both hemispheres 1366.1
2805 Female, age 91, both hemispheres 1353.8
Nucleus gracilis
nTPM: 1594.5
2627 Male, age 74, both hemispheres 2320.6
2382 Male, age 80, both hemispheres 1323.1
2299 Female, age 85, both hemispheres 1139.8
Nucleus raphe magnus
nTPM: 2077.8
2160 Male, age 61, both hemispheres 2612.4
2172 Female, age 85, both hemispheres 2458.0
2455 Male, age 74, both hemispheres 2151.9
2051 Male, age 76, both hemispheres 1926.6
2328 Male, age 80, both hemispheres 1840.6
2459 Female, age 91, both hemispheres 1477.3
Nucleus raphe obscurus
nTPM: 1916.3
2800 Male, age 61, midline 2007.6
2845 Female, age 85, midline 1894.1
2142 Male, age 76, midline 1847.2
Nucleus raphe pallidus
nTPM: 2115.4
1924 Male, age 61, midline 2488.5
2183 Male, age 80, midline 2228.7
2145 Male, age 76, midline 1629.0
Nucleus tractus solitarii
nTPM: 1444.5
2144 Female, age 91, right hemisphere 1695.8
2656 Male, age 76, both hemispheres 1506.1
2191 Female, age 85, both hemispheres 1367.9
2307 Male, age 80, both hemispheres 1208.0
Paramedian reticular nucleus
nTPM: 2057.6
2050 Female, age 85, both hemispheres 2356.2
2057 Male, age 80, both hemispheres 2099.6
2313 Male, age 61, both hemispheres 2087.1
2052 Male, age 76, both hemispheres 1687.5
Parvicellular reticular nuclei
nTPM: 1866.7
2119 Male, age 80, both hemispheres 2191.6
2095 Male, age 76, both hemispheres 1896.2
2558 Male, age 74, both hemispheres 1512.3
Parvicellular reticular nuclei, medullary
nTPM: 1932.1
2189 Female, age 91, both hemispheres 2136.2
2091 Female, age 85, both hemispheres 2025.8
2181 Male, age 80, left hemisphere 1634.4
Pedunculopontine tegmental nucleus
nTPM: 2018.9
2338 Male, age 61, both hemispheres 2285.8
2334 Male, age 80, both hemispheres 2021.0
1921 Female, age 85, both hemispheres 1749.9
Peritrigeminal nucleus
nTPM: 2312.1
2136 Male, age 76, both hemispheres 2362.3
2067 Female, age 85, both hemispheres 2352.5
2179 Male, age 61, both hemispheres 2221.4
Pontine nuclei
nTPM: 2165.2
2787 Female, age 85, both hemispheres 2889.7
1863 Male, age 55, unknown 2818.1
2727 Male, age 61, right hemisphere 2334.6
2109 Female, age 72, unknown 2237.7
1968 Male, age 76, left hemisphere 1981.7
2454 Male, age 74, left hemisphere 1777.7
2115 Male, age 80, left hemisphere 1686.8
2319 Female, age 91, both hemispheres 1595.6
Pontine raphe nucleus
nTPM: 1967.0
2122 Female, age 85, midline 2114.0
2853 Male, age 76, midline 1820.0
Posteroventral cochlear nucleus
nTPM: 1743.7
2752 Female, age 85, both hemispheres 1989.3
2341 Male, age 80, both hemispheres 1798.4
2070 Male, age 76, both hemispheres 1752.4
2371 Male, age 61, both hemispheres 1640.0
2135 Female, age 91, both hemispheres 1538.4
Prepositus hypoglossal nucleus
nTPM: 1930.9
2855 Female, age 85, right hemisphere 2077.1
2086 Male, age 80, both hemispheres 1784.8
Principal sensory trigeminal nucleus
nTPM: 1952.1
2158 Male, age 61, both hemispheres 2373.5
2324 Male, age 76, both hemispheres 2017.8
2008 Male, age 80, left hemisphere 1931.4
2367 Female, age 91, left hemisphere 1485.7
Reticular pontine nucleus, caudal
nTPM: 1709.8
2092 Male, age 76, both hemispheres 1955.2
2332 Male, age 80, right hemisphere 1880.3
2559 Male, age 74, both hemispheres 1600.8
2457 Female, age 91, both hemispheres 1403.1
Reticular pontine nucleus, oral
nTPM: 1914.3
1939 Male, age 80, both hemispheres 2183.3
2167 Male, age 76, both hemispheres 2066.3
2012 Female, age 85, both hemispheres 2003.7
2361 Male, age 74, both hemispheres 1764.0
2366 Female, age 91, both hemispheres 1554.2
Reticulotegmental nucleus
nTPM: 1894.8
2325 Male, age 76, both hemispheres 2061.5
2322 Female, age 91, both hemispheres 1940.6
2333 Male, age 80, both hemispheres 1874.0
2452 Male, age 74, both hemispheres 1703.0
Spinal trigeminal nucleus, caudal
nTPM: 1820.0
2390 Female, age 91, both hemispheres 2313.6
2447 Male, age 76, both hemispheres 1834.3
2642 Male, age 74, both hemispheres 1760.7
2308 Male, age 80, both hemispheres 1615.2
2312 Male, age 61, both hemispheres 1576.5
Spinal trigeminal nucleus, interpolar
nTPM: 2282.8
2625 Male, age 61, both hemispheres 3365.6
2066 Male, age 76, right hemisphere 2616.2
2033 Male, age 80, both hemispheres 1997.1
2389 Female, age 91, both hemispheres 1794.5
2386 Female, age 85, both hemispheres 1640.6
Spinal trigeminal nucleus, oral
nTPM: 1788.9
2164 Male, age 80, both hemispheres 2051.2
2737 Female, age 85, both hemispheres 1890.4
1978 Male, age 76, both hemispheres 1425.0
Spinal vestibular nucleus
nTPM: 1901.6
2780 Male, age 80, both hemispheres 2057.0
2186 Female, age 91, both hemispheres 2042.3
2796 Male, age 61, both hemispheres 2006.7
2806 Female, age 85, both hemispheres 1891.2
2748 Male, age 76, both hemispheres 1833.4
2384 Male, age 74, both hemispheres 1578.8
Subcoeruleus area
nTPM: 1858.1
1958 Male, age 80, both hemispheres 2075.7
2323 Female, age 91, left hemisphere 2071.5
2369 Female, age 85, left hemisphere 1918.2
2451 Male, age 74, both hemispheres 1624.1
2089 Male, age 76, left hemisphere 1600.8
Superior olive
nTPM: 1856.8
1875 Female, age 85, both hemispheres 2184.0
2364 Male, age 74, right hemisphere 2150.7
2020 Male, age 76, both hemispheres 1767.4
2329 Male, age 80, right hemisphere 1688.5
2561 Female, age 91, both hemispheres 1493.4
Superior vestibular nucleus
nTPM: 1909.2
2383 Male, age 74, both hemispheres 2026.6
2061 Male, age 76, both hemispheres 1866.9
2015 Male, age 80, both hemispheres 1834.2
Ventral medullary reticular nucleus
nTPM: 1638.6
2060 Male, age 76, both hemispheres 1665.7
2372 Male, age 61, both hemispheres 1611.5
Ventral periolivary nuclei
nTPM: 1941.2
2130 Female, age 85, both hemispheres 2357.3
2165 Male, age 80, both hemispheres 2307.3
2023 Male, age 76, both hemispheres 1680.9
2794 Female, age 91, left hemisphere 1419.1
Ventrolateral medulla, A1-C1 cell groups
nTPM: 2020.9
1986 Male, age 76, both hemispheres 2355.5
2741 Female, age 85, both hemispheres 2149.5
2180 Male, age 61, both hemispheres 2002.3
2302 Female, age 91, both hemispheres 1950.1
2118 Male, age 80, both hemispheres 1647.4
Ventrolateral tegmental area, A5 NE cell group
nTPM: 1877.4
2359 Male, age 61, both hemispheres 2256.2
2840 Female, age 85, both hemispheres 2140.6
2449 Male, age 74, both hemispheres 1931.4
1959 Male, age 76, both hemispheres 1887.6
2161 Male, age 80, both hemispheres 1755.8
2456 Female, age 91, both hemispheres 1293.0

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 3737.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 1588.4
FF:10182-103D2 60 years, female 1883.2
FF:10165-103B3 76 years, female 1293.6
Medulla oblongata
Scaled Tags Per Million: 2082.1
FF:10038-101F2 18-64 years, mixed 3284.4
FF:10174-103C3 60 years, female 1808.3
FF:10155-103A2 76 years, female 1153.5
Pons
Scaled Tags Per Million: 3737.5
FF:10033-101E6 18-54 years, mixed 3737.5

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 2763.0
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 2401.4
Samples: 4

Max nTPM: 2569.9
Min nTPM: 2196.4
Sample A Female 2196.4
Sample B Female 2556.2
Sample C Male 2569.9
Sample D Male 2282.9
Pons
nTPM: 2763.0
Samples: 4

Max nTPM: 3266.2
Min nTPM: 2148.2
Sample A Female 3266.2
Sample B Female 2148.2
Sample C Male 2487.7
Sample D Male 3149.9

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 2749.9
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 2749.9
Samples: 4

Max nTPM: 2828.2
Min nTPM: 2683.8
Sample A Male 2801.9
Sample B Male 2683.8
Sample C Female 2828.2
Sample D Female 2685.7

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 19.7
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 19.7
70276861 Antisense, RP_050531_01_D11, Mouse strain C57BL/6J (56 days, male) 19.7
Pons
Expression energy: 18.1
70276861 Antisense, RP_050531_01_D11, Mouse strain C57BL/6J (56 days, male) 18.1

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