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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
PRIMARY MOUSE DATA
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:327.3 nTPM
HPA Brain:523.9 nTPM
GTEx:327.3 nTPM
FANTOM5:432.5 Scaled Tags Per Million
Pig:464.4 nTPM
Mouse:951.0 nTPM
Allen mouse:26.9 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody CAB000063Antibody CAB073539
Glial cells HighNot detected
Neuronal cells HighHigh





BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

523.9
Sample id Sample description nTPM
Caudate nucleus
nTPM: 358.4
1781 Male, age 74, unknown 445.0
1857 Female, age 85, left hemisphere 406.2
2846 Female, age 79, unknown 392.3
2288 Male, age 75, left hemisphere 380.3
1854 Male, age 80, left hemisphere 379.4
2290 Female, age 72, unknown 360.0
2289 Male, age 61, right hemisphere 266.6
2481 Female, age 94, left hemisphere 237.1
Globus pallidus, externus
nTPM: 215.3
2772 Female, age 79, unknown 331.0
2395 Male, age 75, both hemispheres 269.6
2646 Male, age 61, right hemisphere 166.9
1996 Male, age 80, right hemisphere 158.6
2567 Female, age 72, unknown 150.2
Globus pallidus, internus
nTPM: 200.8
2287 Male, age 75, right hemisphere 294.9
1818 Male, age 74, unknown 244.4
2483 Female, age 94, right hemisphere 220.8
2566 Female, age 72, unknown 181.9
2037 Male, age 80, right hemisphere 173.1
2778 Female, age 91, both hemispheres 159.8
2111 Female, age 85, right hemisphere 130.6
Nucleus accumbens
nTPM: 379.4
1856 Female, age 91, right hemisphere 601.5
1783 Male, age 74, unknown 456.0
2824 Male, age 61, right hemisphere 430.0
1806 Female, age 85, left hemisphere 406.6
2286 Male, age 75, left hemisphere 376.1
2698 Female, age 72, unknown 323.3
2732 Male, age 80, right hemisphere 234.4
2391 Female, age 94, left hemisphere 207.0
Nucleus basalis of Meynert
nTPM: 268.8
2393 Male, age 80, right hemisphere 327.6
2484 Female, age 94, left hemisphere 311.3
2821 Male, age 75, both hemispheres 290.9
2569 Male, age 61, both hemispheres 145.3
Nucleus of the diagonal band
nTPM: 505.4
1812 Female, age 91, both hemispheres 649.2
2775 Male, age 80, right hemisphere 605.2
2029 Male, age 61, right hemisphere 518.7
2195 Female, age 85, both hemispheres 462.0
1979 Male, age 74, unknown 291.9
Putamen
nTPM: 345.2
1937 Female, age 91, right hemisphere 482.8
1838 Male, age 80, right hemisphere 467.1
2466 Female, age 79, unknown 421.2
1829 Male, age 74, unknown 336.7
2647 Male, age 75, left hemisphere 273.6
2482 Female, age 94, left hemisphere 235.8
2489 Female, age 72, unknown 199.2
Septal nuclei
nTPM: 423.4
2031 Female, age 72, unknown 597.7
1960 Male, age 74, unknown 563.4
2009 Female, age 91, both hemispheres 518.7
2629 Female, age 94, right hemisphere 466.6
2059 Female, age 85, both hemispheres 350.0
2394 Male, age 61, left hemisphere 277.5
2199 Male, age 80, right hemisphere 189.9
Stria terminalis, bed nucleus
nTPM: 523.9
1974 Female, age 91, both hemispheres 725.3
2486 Female, age 94, both hemispheres 546.6
2201 Male, age 74, unknown 299.9

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

327.3
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 260.6
Samples: 246

Max nTPM: 592.1
Min nTPM: 61.7
Std nTPM: 116.4
Median nTPM: 261.2
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 592.1
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 582.9
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 565.7
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 522.2
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 506.7
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 496.4
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 474.6
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 471.9
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 470.0
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 465.3
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 463.5
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 463.1
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 458.9
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 454.9
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 454.7
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 453.2
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 452.8
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 442.7
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 441.3
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 439.6
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 438.5
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 438.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 435.6
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 430.7
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 427.5
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 422.2
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 422.0
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 416.2
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 414.5
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 409.6
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 408.8
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 408.0
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 407.7
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 402.2
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 400.3
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 397.0
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 395.3
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 394.7
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 393.1
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 383.2
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 374.1
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 373.5
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 373.2
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 372.2
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 369.6
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 368.9
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 364.6
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 358.9
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 358.5
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 356.7
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 356.2
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 355.4
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 352.3
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 349.4
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 349.1
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 348.4
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 345.4
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 342.9
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 341.7
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 340.8
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 339.1
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 336.2
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 334.4
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 334.1
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 333.4
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 330.5
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 330.5
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 329.9
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 329.4
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 327.9
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 327.5
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 326.2
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 324.7
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 323.7
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 323.0
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 322.0
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 320.3
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 319.4
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 317.3
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 313.7
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 311.9
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 307.8
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 306.1
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 304.6
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 304.3
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 303.1
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 303.1
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 302.4
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 302.1
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 301.9
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 301.0
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 299.5
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 297.1
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 296.6
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 296.4
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 294.9
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 292.3
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 291.5
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 290.5
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 290.3
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 288.5
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 287.4
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 286.4
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 286.3
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 285.5
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 284.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 283.0
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 282.4
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 282.0
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 281.0
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 280.9
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 278.6
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 276.9
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 275.6
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 273.6
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 272.5
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 271.1
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 268.8
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 267.4
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 267.3
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 263.5
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 262.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 262.6
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 259.7
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 258.6
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 255.0
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 253.2
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 250.9
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 250.6
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 248.6
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 248.0
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 247.5
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 244.3
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 242.8
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 240.8
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 239.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 238.8
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 237.2
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 236.6
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 235.4
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 233.3
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 230.9
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 228.9
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 227.0
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 226.8
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 226.3
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 226.1
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 224.1
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 219.2
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 218.2
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 217.4
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 216.2
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 215.5
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 215.4
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 207.7
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 206.1
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 205.8
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 205.2
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 205.0
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 200.1
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 198.6
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 198.4
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 196.5
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 193.7
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 187.9
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 187.2
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 187.1
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 186.2
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 186.1
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 184.7
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 184.2
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 184.2
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 180.8
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 180.2
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 179.6
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 179.3
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 177.5
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 177.1
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 176.5
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 175.4
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 174.4
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 171.5
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 165.3
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 164.7
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 160.9
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 158.0
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 156.5
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 156.3
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 155.8
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 151.6
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 145.4
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 144.5
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 143.5
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 142.3
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 140.8
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 137.0
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 134.3
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 130.3
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 129.5
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 128.4
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 128.4
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 128.0
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 127.7
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 126.1
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 125.0
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 124.8
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 121.6
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 121.5
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 121.4
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 120.6
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 120.3
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 120.1
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 118.0
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 116.4
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 116.3
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 114.9
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 114.4
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 114.3
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 112.5
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 110.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 109.5
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 109.1
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 108.9
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 108.9
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 108.6
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 107.9
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 106.7
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 105.0
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 104.3
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 103.2
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 102.7
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 101.6
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 100.5
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 99.2
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 99.1
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 99.0
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 95.3
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 94.6
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 92.9
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 91.8
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 83.5
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 83.0
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 73.4
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 71.6
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 66.1
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 61.7
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 327.3
Samples: 246

Max nTPM: 662.5
Min nTPM: 58.9
Std nTPM: 133.0
Median nTPM: 341.9
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 662.5
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 615.3
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 594.9
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 584.2
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 575.8
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 561.2
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 559.8
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 550.9
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 549.3
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 541.6
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 537.8
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 535.7
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 529.6
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 522.7
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 519.6
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 512.5
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 511.6
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 509.6
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 509.4
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 508.2
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 507.1
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 506.1
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 500.5
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 495.8
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 495.4
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 494.5
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 494.0
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 491.9
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 491.1
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 489.1
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 488.8
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 487.5
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 487.0
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 486.9
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 481.9
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 481.6
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 481.0
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 469.7
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 469.5
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 467.4
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 466.6
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 457.3
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 456.6
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 456.5
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 450.6
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 448.8
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 446.0
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 443.5
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 440.2
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 439.9
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 439.4
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 438.1
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 437.9
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 437.6
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 437.1
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 436.0
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 435.9
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 434.6
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 434.4
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 433.5
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 429.2
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 429.1
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 426.8
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 426.1
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 424.2
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 417.9
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 415.7
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 415.3
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 413.9
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 413.8
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 412.1
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 411.8
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 409.7
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 409.5
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 408.9
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 407.7
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 407.4
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 406.0
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 402.6
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 402.6
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 401.3
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 400.8
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 398.7
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 398.6
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 397.5
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 396.5
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 396.0
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 394.4
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 391.7
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 388.5
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 386.1
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 385.9
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 385.5
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 384.8
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 384.2
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 380.0
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 379.1
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 378.9
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 376.8
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 374.8
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 373.8
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 373.6
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 371.6
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 371.5
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 369.4
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 369.2
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 366.8
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 366.4
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 363.9
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 363.8
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 363.5
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 363.0
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 358.7
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 358.4
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 357.8
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 357.6
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 355.9
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 349.9
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 346.1
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 345.8
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 345.3
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 344.4
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 344.1
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 339.6
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 337.9
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 332.8
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 331.6
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 331.1
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 331.1
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 328.6
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 328.3
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 327.9
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 327.2
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 326.4
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 325.8
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 321.8
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 320.8
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 320.5
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 318.8
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 314.1
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 311.8
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 309.3
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 308.8
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 308.6
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 308.2
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 306.3
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 304.7
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 289.5
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 288.8
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 288.6
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 287.4
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 286.8
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 284.1
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 281.9
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 281.6
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 281.4
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 281.4
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 280.9
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 275.8
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 273.5
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 266.4
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 266.4
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 265.9
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 265.8
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 265.3
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 264.1
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 263.9
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 261.6
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 261.4
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 257.8
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 257.3
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 256.8
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 255.8
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 251.0
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 250.8
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 250.0
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 248.5
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 242.5
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 240.5
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 230.0
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 228.9
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 227.4
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 226.0
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 224.6
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 223.4
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 206.0
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 206.0
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 205.6
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 204.4
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 201.5
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 201.4
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 200.4
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 198.6
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 188.1
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 187.7
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 187.0
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 182.6
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 182.4
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 179.3
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 177.1
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 176.6
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 174.8
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 172.5
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 172.1
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 169.7
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 168.5
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 166.8
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 166.5
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 165.7
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 161.3
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 158.0
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 152.8
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 151.9
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 143.1
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 142.7
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 142.6
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 140.7
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 139.8
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 137.6
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 133.7
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 133.3
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 132.6
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 130.5
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 130.3
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 129.4
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 129.3
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 126.6
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 126.1
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 121.9
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 121.5
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 120.8
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 120.2
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 114.4
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 111.6
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 106.6
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 102.9
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 99.5
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 99.2
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 97.9
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 97.5
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 94.8
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 93.3
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 92.6
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 78.2
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 69.5
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 58.9
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Brain - Putamen (basal ganglia)
Average nTPM: 256.0
Samples: 205

Max nTPM: 557.1
Min nTPM: 71.7
Std nTPM: 116.1
Median nTPM: 241.1
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 557.1
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 528.8
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 520.4
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 511.3
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 498.8
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 496.0
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 492.4
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 469.0
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 461.5
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 457.8
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 455.2
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 449.4
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 446.5
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 446.0
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 444.0
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 441.3
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 435.1
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 432.7
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 427.0
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 424.1
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 420.1
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 416.4
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 411.0
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 403.1
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 402.5
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 401.4
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 401.1
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 397.4
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 393.7
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 392.6
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 389.5
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 389.3
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 388.7
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 387.1
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 378.2
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 377.6
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 375.6
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 374.0
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 373.8
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 370.9
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 369.0
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 368.2
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 366.6
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 366.4
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 366.4
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 365.2
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 363.6
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 359.6
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 358.7
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 358.3
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 355.3
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 350.0
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 347.5
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 346.2
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 344.0
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 343.9
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 342.0
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 338.3
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 338.1
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 335.0
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 334.9
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 333.2
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 326.1
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 323.8
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 323.3
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 319.2
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 314.0
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 311.3
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 306.3
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 304.3
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 297.2
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 297.0
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 295.1
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 293.4
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 290.7
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 289.7
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 289.0
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 285.8
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 284.0
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 283.1
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 279.0
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 277.9
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 276.3
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 274.3
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 267.5
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 266.3
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 263.4
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 259.6
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 258.1
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 257.4
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 254.6
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 252.4
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 251.0
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 249.4
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 249.3
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 248.4
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 247.1
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 247.1
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 247.0
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 245.0
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 242.3
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 241.1
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 241.1
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 240.5
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 240.5
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 238.3
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 238.2
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 237.4
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 236.6
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 233.7
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 226.9
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 225.8
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 224.4
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 221.7
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 221.0
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 219.9
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 217.1
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 216.2
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 216.2
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 212.1
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 211.5
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 210.5
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 208.8
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 208.2
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 205.2
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 201.7
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 201.3
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 201.2
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 199.5
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 197.9
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 197.5
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 196.6
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 192.9
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 190.2
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 187.1
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 183.5
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 182.5
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 178.7
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 178.5
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 177.7
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 176.4
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 176.0
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 175.0
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 174.4
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 173.0
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 168.8
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 168.2
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 166.9
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 164.0
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 164.0
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 162.0
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 161.7
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 159.9
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 159.3
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 157.0
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 156.6
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 156.0
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 155.9
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 153.5
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 152.7
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 150.4
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 149.6
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 149.6
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 149.4
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 139.4
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 136.2
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 136.0
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 135.4
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 135.2
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 133.0
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 132.1
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 129.0
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 126.8
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 125.8
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 125.4
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 124.9
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 123.7
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 123.2
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 121.2
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 120.0
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 116.6
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 115.4
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 114.3
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 114.2
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 113.6
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 112.7
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 112.3
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 108.8
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 106.0
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 104.9
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 103.5
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 100.4
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 99.5
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 97.8
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 92.3
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 91.7
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 91.1
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 90.2
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 85.9
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 84.0
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 79.6
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 75.7
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 75.6
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 73.7
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 71.7
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

432.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 309.0
FF:10164-103B2 76 years, female 309.0
Nucleus accumbens
Scaled Tags Per Million: 432.5
FF:10037-101F1 23-56 years, mixed 432.5
Putamen
Scaled Tags Per Million: 394.7
FF:10176-103C5 60 years, female 394.7
Globus pallidus
Scaled Tags Per Million: 117.8
FF:10175-103C4 60 years, female 131.0
FF:10161-103A8 76 years, female 104.6

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

464.4
Pig sample Sample description nTPM
Caudate
nTPM: 464.4
Samples: 4

Max nTPM: 553.7
Min nTPM: 352.0
Sample A Female 352.0
Sample B Female 505.4
Sample C Male 553.7
Sample D Male 446.3
Putamen
nTPM: 459.8
Samples: 4

Max nTPM: 731.9
Min nTPM: 242.2
Sample A Female 242.2
Sample B Female 405.5
Sample C Male 731.9
Sample D Male 459.6
Septum
nTPM: 426.7
Samples: 4

Max nTPM: 523.0
Min nTPM: 341.7
Sample A Female 450.8
Sample B Female 391.2
Sample C Male 523.0
Sample D Male 341.7
Ventral pallidum
nTPM: 409.0
Samples: 4

Max nTPM: 495.5
Min nTPM: 331.8
Sample A Female 399.9
Sample B Female 408.6
Sample C Male 495.5
Sample D Male 331.8

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

951.0
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 944.3
Samples: 4

Max nTPM: 1021.1
Min nTPM: 840.7
Sample A Male 1020.1
Sample B Male 1021.1
Sample C Female 840.7
Sample D Female 895.2
Septum
nTPM: 859.4
Samples: 4

Max nTPM: 892.8
Min nTPM: 769.5
Sample A Male 892.8
Sample B Male 887.2
Sample C Female 888.2
Sample D Female 769.5
Ventral forebrain
nTPM: 951.0
Samples: 4

Max nTPM: 1019.3
Min nTPM: 864.9
Sample A Male 864.9
Sample B Male 978.1
Sample C Female 1019.3
Sample D Female 941.7

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

26.9
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 26.9
112197625 Antisense, RP_110421_01_F07, Mouse strain C57BL/6J (56 days, male) 29.0
79360272 Antisense, RP_071018_01_G01, Mouse strain C57BL/6J (56 days, male) 24.8
Pallidum
Expression energy: 23.4
112197625 Antisense, RP_110421_01_F07, Mouse strain C57BL/6J (56 days, male) 24.4
79360272 Antisense, RP_071018_01_G01, Mouse strain C57BL/6J (56 days, male) 22.3

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