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BRAIN CEREBELLUM Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
PRIMARY MOUSE DATA
ANTIBODIES
AND
VALIDATION
Brain proteome
Cerebellum
CEREBELLUM - Expression summary
Protein expression
Cerebellumi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Cells in granular layer: High
Cells in molecular layer: Medium
Purkinje cells: Medium
Mouse brain, Intensity
Cerebellumi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity .

64.147
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:844.5 nTPM
HPA Brain:547.2 nTPM
GTEx:844.5 nTPM
FANTOM5:584.2 Scaled Tags Per Million
Pig:510.9 nTPM
Mouse:671.5 nTPM
Allen mouse:25.0 Expression energy

CEREBELLUM - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody CAB000063Antibody CAB073539
Purkinje cells Not detectedMedium
Cells in granular layer HighHigh
Cells in molecular layer Not detectedMedium





CEREBELLUM - Mouse brain profilei

Protein expression in mouse brain using immunofluorescence is reported as fluorescence intensity .

, antibody CAB079023
Cerebellum mean intensity 64.147
intensityi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity .

FRONT BACK
Vestibulocerebellar nucleus -
Moleuclar layer of the cerebellum 57.670
Purkinje layer of the cerebellum 43.685
Granular layer of the cerebellum 47.746

CEREBELLUM - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

547.2
Sample id Sample description nTPM
Cerebellar cortex
nTPM: 547.2
2101 Male, age 74, right hemisphere 1265.0
1768 Female, age 72, unknown 649.7
2055 Female, age 91, right hemisphere 566.9
1774 Male, age 80, left hemisphere 460.9
2006 Male, age 61, right hemisphere 430.7
1788 Male, age 55, unknown 407.0
1769 Male, age 76, right hemisphere 355.2
2003 Female, age 85, right hemisphere 242.1
Cerebellar nuclei
nTPM: 322.9
2318 Male, age 74, left hemisphere 569.4
2783 Female, age 72, unknown 433.4
2177 Female, age 85, both hemispheres 367.4
1879 Male, age 55, unknown 290.6
2882 Male, age 76, left hemisphere 287.9
1966 Female, age 91, left hemisphere 279.7
2175 Male, age 61, right hemisphere 244.7
2005 Male, age 80, left hemisphere 232.1
1871 Male, age 74, unknown 201.1
Flocculonodular lobe
nTPM: 442.9
2176 Female, age 91, right hemisphere 559.8
1792 Male, age 74, unknown 533.2
1771 Male, age 80, left hemisphere 505.0
1835 Female, age 85, right hemisphere 422.9
2004 Male, age 61, right hemisphere 415.0
1765 Male, age 55, unknown 342.4
1767 Male, age 76, left hemisphere 321.9
Vermis
nTPM: 504.0
1751 Male, age 74, right hemisphere 966.9
1928 Female, age 72, unknown 674.2
1778 Female, age 91, left hemisphere 488.2
2834 Male, age 80, left hemisphere 465.8
1825 Male, age 74, unknown 458.0
1988 Female, age 85, left hemisphere 440.5
1770 Male, age 76, left hemisphere 376.0
1766 Male, age 55, unknown 340.9
2460 Male, age 61, both hemispheres 325.6

CEREBELLUM - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

844.5
GTEx sample id Sample description nTPM
Brain - Cerebellar Hemisphere
Average nTPM: 844.5
Samples: 215

Max nTPM: 1396.9
Min nTPM: 356.9
Std nTPM: 160.0
Median nTPM: 850.4
GTEX-13FLV-0011-R11a-SM-5LZZ7 50-59 years, male 1396.9
GTEX-1B933-0011-R11a-SM-7P8PM 50-59 years, female 1320.1
GTEX-13X6J-0011-R11a-SM-5P9HE 50-59 years, male 1222.9
GTEX-N7MS-0011-R11A-SM-2HMJS 60-69 years, male 1207.3
GTEX-1313W-0011-R11a-SM-5DUXN 50-59 years, female 1179.7
GTEX-1HFI6-0011-R11b-SM-A96RU 40-49 years, male 1174.5
GTEX-145MH-0011-R11a-SM-5P9HQ 50-59 years, male 1158.6
GTEX-145LU-0011-R11b-SM-5P9JX 50-59 years, male 1142.1
GTEX-1B8L1-0011-R11b-SM-793DJ 60-69 years, male 1119.7
GTEX-1F6I4-0011-R11b-SM-9OSWS 60-69 years, male 1088.5
GTEX-1F7RK-0011-R11b-SM-9QEI2 20-29 years, female 1088.5
GTEX-1EMGI-0011-R11b-SM-9OSWX 60-69 years, male 1083.3
GTEX-11ZUS-0011-R11b-SM-5BC7B 30-39 years, male 1082.4
GTEX-13OW6-0011-R11a-SM-5L3H2 50-59 years, male 1055.5
GTEX-12WSI-0011-R11b-SM-5P9EZ 50-59 years, male 1051.7
GTEX-1F75W-0011-R11b-SM-AHZ34 60-69 years, male 1048.1
GTEX-1F75A-0011-R11a-SM-AHZ35 50-59 years, male 1047.3
GTEX-1IY9M-0011-R11b-SM-A96TI 60-69 years, male 1037.7
GTEX-13SLX-0011-R11b-SM-5O9C8 50-59 years, female 1031.4
GTEX-1H4P4-0011-R11b-SM-CE6S8 50-59 years, male 1030.0
GTEX-1E1VI-0011-R11a-SM-9OSWI 50-59 years, male 1029.5
GTEX-1CB4G-0011-R11a-SM-9OSWG 60-69 years, male 1029.3
GTEX-1KD4Q-0011-R11b-SM-EXOIE 40-49 years, male 1029.0
GTEX-1JMQJ-0011-R11a-SM-EXOJY 50-59 years, male 1015.0
GTEX-132Q8-0011-R11b-SM-5DUW9 60-69 years, male 1014.3
GTEX-139TT-0011-R11b-SM-5LZV1 60-69 years, male 1013.1
GTEX-13VXU-0011-R11b-SM-5O9DJ 50-59 years, male 1009.0
GTEX-1I1GV-0011-R11a-SM-CJI3Z 60-69 years, male 1001.2
GTEX-ZVZQ-0011-R11a-SM-51MS6 60-69 years, female 1000.8
GTEX-13RTJ-0011-R11a-SM-5O9CK 60-69 years, male 1000.5
GTEX-131XH-0011-R11a-SM-5EGLN 50-59 years, male 997.1
GTEX-11EMC-0011-R11b-SM-DNZZK 60-69 years, female 995.1
GTEX-16GPK-0011-R11b-SM-7MKFF 60-69 years, male 995.0
GTEX-17EVP-0011-R11a-SM-7EWDL 40-49 years, male 989.4
GTEX-11OF3-0011-R11a-SM-57WCR 60-69 years, male 986.9
GTEX-13OVH-0011-R11b-SM-5KM4X 70-79 years, male 986.6
GTEX-13G51-0011-R11b-SM-5J2NE 60-69 years, male 985.0
GTEX-1B8SF-0011-R11a-SM-79OOP 60-69 years, male 984.8
GTEX-1I19N-0011-R11b-SM-ARU6Y 70-79 years, male 984.2
GTEX-1R9K4-0011-R11a-SM-EZ6N9 60-69 years, male 984.2
GTEX-1EKGG-0011-R11a-SM-9QEHZ 60-69 years, male 983.8
GTEX-1I1HK-0011-R11a-SM-B2LVN 60-69 years, male 982.1
GTEX-12WSE-0011-R11b-SM-5P9JW 20-29 years, male 978.7
GTEX-12WSD-0011-R11a-SM-9OSVC 60-69 years, female 976.0
GTEX-1C64N-0011-R11b-SM-7P8Q6 50-59 years, male 974.3
GTEX-13OW7-0011-R11a-SM-5O9DY 50-59 years, male 973.1
GTEX-1HSKV-0011-R11b-SM-AHZ2E 60-69 years, male 969.3
GTEX-1H1CY-0011-R11a-SM-C1YQR 60-69 years, female 967.8
GTEX-1HBPI-0011-R11b-SM-CE6SH 50-59 years, male 965.6
GTEX-18464-0011-R11a-SM-72D76 50-59 years, male 956.0
GTEX-14ABY-0011-R11a-SM-5SI7C 50-59 years, male 952.5
GTEX-1GF9W-0011-R11b-SM-9OSXG 60-69 years, male 951.8
GTEX-YJ89-0011-R11a-SM-4SOKA 60-69 years, male 948.9
GTEX-13FXS-0011-R11a-SM-5L3DM 50-59 years, male 948.6
GTEX-NL4W-0011-R11A-SM-2I3DW 50-59 years, male 948.6
GTEX-12WSF-0011-R11a-SM-5LZVT 70-79 years, male 948.2
GTEX-14PN4-0011-R11a-SM-686ZW 50-59 years, male 944.4
GTEX-WZTO-0011-R11A-SM-4E3K9 40-49 years, male 942.9
GTEX-13O3Q-0011-R11b-SM-5KM2W 50-59 years, male 942.1
GTEX-WL46-0011-R11A-SM-3MJFT 50-59 years, male 938.3
GTEX-18A6Q-0011-R11a-SM-72D6H 60-69 years, male 937.7
GTEX-S7SE-0011-R11A-SM-2XCDD 50-59 years, male 937.4
GTEX-1LG7Y-0011-R11a-SM-EXOIH 50-59 years, male 934.1
GTEX-1ICLZ-0011-R11a-SM-CJI3N 60-69 years, male 933.3
GTEX-1HCU6-0011-R11b-SM-AHZ2F 60-69 years, female 930.6
GTEX-11DYG-0011-R11a-SM-DNZZP 60-69 years, male 927.6
GTEX-16YQH-0011-R11b-SM-7LT98 30-39 years, male 925.6
GTEX-12ZZZ-0011-R11a-SM-5EGLC 60-69 years, male 924.3
GTEX-15CHQ-0011-R11b-SM-686ZZ 60-69 years, male 921.9
GTEX-1AX9I-0011-R11b-SM-7DHN4 60-69 years, male 920.4
GTEX-1I1GQ-0011-R11b-SM-CKZPA 50-59 years, male 909.4
GTEX-1IDJH-0011-R11b-SM-C1YRT 70-79 years, male 909.1
GTEX-P44G-0011-R11A-SM-2I3FD 30-39 years, male 908.4
GTEX-13S7M-0011-R11b-SM-5P9HU 60-69 years, female 907.9
GTEX-13O3O-0011-R11b-SM-5KM4G 60-69 years, female 907.4
GTEX-T5JC-0011-R11A-SM-32PMB 20-29 years, male 905.4
GTEX-11GSP-0011-R11b-SM-5NQ7V 60-69 years, female 904.3
GTEX-1LSVX-0011-R11b-SM-EXOIA 60-69 years, male 904.1
GTEX-17HII-0011-R11b-SM-7KFSX 50-59 years, male 903.3
GTEX-144GL-0011-R11b-SM-5P9F6 50-59 years, male 901.7
GTEX-1N2DW-0011-R11b-SM-EXOIL 50-59 years, male 897.1
GTEX-X261-0011-R11A-SM-4E3JY 50-59 years, male 895.5
GTEX-1GN73-0011-R11b-SM-9OSX4 60-69 years, male 895.5
GTEX-1LVAO-0011-R11b-SM-EXOI8 60-69 years, male 893.0
GTEX-1GZHY-0011-R11a-SM-C1YRQ 50-59 years, female 891.0
GTEX-T2IS-0011-R11A-SM-32QPC 20-29 years, female 890.0
GTEX-1GMR8-0011-R11b-SM-9OSX2 50-59 years, female 889.0
GTEX-RVPV-0011-R11A-SM-2TF6F 60-69 years, male 885.2
GTEX-13N2G-0011-R11a-SM-5MR3F 60-69 years, male 880.8
GTEX-11ZTS-0011-R11a-SM-DO113 60-69 years, female 879.6
GTEX-13X6I-0011-R11a-SM-5P9HN 60-69 years, male 878.4
GTEX-17EVQ-0011-R11a-SM-7LT9C 70-79 years, male 877.6
GTEX-1GZ4I-0011-R11b-SM-9OSWR 50-59 years, male 876.0
GTEX-13OVL-0011-R11b-SM-5L3G7 50-59 years, male 875.9
GTEX-17JCI-0011-R11a-SM-7189Y 60-69 years, female 875.1
GTEX-12126-0011-R11a-SM-5BC6X 20-29 years, male 874.5
GTEX-14E6D-0011-R11b-SM-664NP 50-59 years, male 872.8
GTEX-13NZA-0011-R11b-SM-5KM4W 60-69 years, male 871.6
GTEX-131YS-0011-R11b-SM-5EGLM 60-69 years, female 863.6
GTEX-18465-0011-R11a-SM-72D78 50-59 years, male 863.2
GTEX-11WQC-0011-R11b-SM-57WD6 60-69 years, male 862.1
GTEX-13FHO-0011-R11b-SM-5LZYQ 60-69 years, male 858.0
GTEX-11DXY-0011-R11a-SM-DNZZN 60-69 years, male 856.6
GTEX-13CF2-0011-R11b-SM-5LZXO 60-69 years, male 855.8
GTEX-1I1GR-0011-R11a-SM-CM2T5 60-69 years, male 855.0
GTEX-1H3O1-0011-R11a-SM-A96RV 60-69 years, male 851.8
GTEX-1B8SG-0011-R11a-SM-7P8PF 50-59 years, male 851.3
GTEX-1HGF4-0011-R11a-SM-C1YRR 60-69 years, male 850.4
GTEX-WWYW-0011-R11A-SM-3NB38 50-59 years, female 848.2
GTEX-14ASI-0011-R11b-SM-6AJBJ 60-69 years, male 846.6
GTEX-1N2EE-0011-R11b-SM-EXOIJ 60-69 years, male 846.2
GTEX-13FHP-0011-R11b-SM-5LZXP 50-59 years, male 846.0
GTEX-14C5O-0011-R11b-SM-6872H 60-69 years, male 845.1
GTEX-1J1OQ-0011-R11a-SM-A96S3 40-49 years, female 843.2
GTEX-1JJ6O-0011-R11b-SM-EXUS2 60-69 years, male 842.3
GTEX-ZUA1-0011-R11b-SM-51MTI 40-49 years, male 842.0
GTEX-13X6K-0011-R11a-SM-5P9F5 60-69 years, female 841.3
GTEX-1I1GS-0011-R11a-SM-C1YRU 60-69 years, male 839.9
GTEX-12WSC-0011-R11a-SM-5GU5J 50-59 years, male 837.3
GTEX-YFC4-0011-R11a-SM-4SOK6 40-49 years, female 834.9
GTEX-15DYW-0011-R11a-SM-6LPIT 60-69 years, female 834.3
GTEX-ZE7O-0011-R11a-SM-57WBC 50-59 years, female 831.6
GTEX-12WSH-0011-R11a-SM-5LZVM 50-59 years, male 830.9
GTEX-1BAJH-0011-R11b-SM-7IGLM 70-79 years, male 829.4
GTEX-WVLH-0011-R11A-SM-3MJFO 50-59 years, male 829.0
GTEX-15ER7-0011-R11a-SM-6LPIL 20-29 years, female 828.8
GTEX-1GMRU-0011-R11b-SM-C1YQ4 50-59 years, male 825.1
GTEX-1J8EW-0011-R11a-SM-AHZ37 60-69 years, female 821.5
GTEX-R55E-0011-R11A-SM-2TC6I 20-29 years, male 816.1
GTEX-ZDXO-0011-R11a-SM-4WWD9 60-69 years, male 813.9
GTEX-ZE9C-0011-R11a-SM-4WKGG 60-69 years, male 812.4
GTEX-11H98-0011-R11b-SM-5NQ6U 50-59 years, male 809.4
GTEX-1H1ZS-0011-R11a-SM-C1YQM 70-79 years, male 809.4
GTEX-1H3VE-0011-R11b-SM-C1YRP 40-49 years, male 808.5
GTEX-1IOXB-0011-R11a-SM-A9G1X 50-59 years, male 807.4
GTEX-ZVT3-0011-R11b-SM-57WBI 60-69 years, female 805.3
GTEX-13OW8-0011-R11a-SM-5L3GT 60-69 years, male 801.6
GTEX-13OW5-0011-R11b-SM-5L3GG 60-69 years, male 788.5
GTEX-13NYB-0011-R11a-SM-5KM3Q 40-49 years, male 788.4
GTEX-12WSM-0011-R11a-SM-5DUX8 60-69 years, male 787.8
GTEX-Q2AG-0011-R11A-SM-2HMKZ 40-49 years, female 787.4
GTEX-13JVG-0011-R11a-SM-5KM53 60-69 years, male 787.1
GTEX-P44H-0011-R11A-SM-2XCER 40-49 years, male 785.8
GTEX-1H3NZ-0011-R11b-SM-CE6SF 60-69 years, male 783.8
GTEX-Z93S-0011-R11a-SM-4RGNN 50-59 years, male 783.1
GTEX-1M4P7-0011-R11b-SM-EXOIK 60-69 years, male 776.7
GTEX-1J8Q2-0011-R11a-SM-A9SKI 60-69 years, male 773.3
GTEX-14DAQ-0011-R11a-SM-664NO 60-69 years, female 765.2
GTEX-11PRG-0011-R11b-SM-DNZZY 50-59 years, male 765.2
GTEX-11TTK-0011-R11b-SM-DO112 60-69 years, female 762.8
GTEX-13QIC-0011-R11b-SM-5O9BU 60-69 years, female 760.7
GTEX-1IL2V-0011-R11a-SM-ARU6T 70-79 years, male 756.9
GTEX-1399T-0011-R11a-SM-5J2O1 60-69 years, male 756.7
GTEX-1F48J-0011-R11b-SM-9OSWV 50-59 years, female 752.6
GTEX-1F52S-0011-R11a-SM-CJI23 60-69 years, female 750.6
GTEX-13FTY-0011-R11a-SM-5IJEA 40-49 years, female 744.9
GTEX-17F97-0011-R11b-SM-7KFRQ 50-59 years, male 744.6
GTEX-1GTWX-0011-R11b-SM-C1YQJ 60-69 years, male 743.1
GTEX-17HG3-0011-R11b-SM-7KFT4 30-39 years, female 738.6
GTEX-1IKK5-0011-R11a-SM-C1YRX 60-69 years, male 736.2
GTEX-Y8DK-0011-R11A-SM-4SOK2 60-69 years, male 734.1
GTEX-1A3MX-0011-R11b-SM-7DUGP 60-69 years, male 732.5
GTEX-14BIM-0011-R11b-SM-5S2RN 60-69 years, female 726.5
GTEX-13SLW-0011-R11a-SM-5SI8Q 70-79 years, male 725.8
GTEX-13PVQ-0011-R11a-SM-5O9DU 50-59 years, male 724.6
GTEX-WHSE-0011-R11A-SM-3P5YY 20-29 years, male 721.2
GTEX-RU72-0011-R11A-SM-CM2U1 50-59 years, female 720.0
GTEX-13OVJ-0011-R11a-SM-5P9H8 50-59 years, female 719.8
GTEX-145MI-0011-R11a-SM-5P9JZ 60-69 years, female 717.4
GTEX-NPJ7-0011-R11A-SM-2I3E8 60-69 years, female 715.7
GTEX-131XW-0011-R11a-SM-5DUV9 50-59 years, female 715.5
GTEX-13JUV-0011-R11a-SM-5LZYH 40-49 years, female 714.2
GTEX-NL3H-0011-R11A-SM-2I3E6 60-69 years, male 714.1
GTEX-13CZV-0011-R11b-SM-5N9FN 60-69 years, male 709.5
GTEX-16Z82-0011-R11a-SM-79OKJ 60-69 years, male 709.2
GTEX-T6MN-0011-R11A-SM-32QOX 50-59 years, male 706.3
GTEX-ZAB4-0011-R11a-SM-4SOKI 40-49 years, male 694.5
GTEX-16XZZ-0011-R11a-SM-7EPI3 60-69 years, male 693.1
GTEX-15EO6-0011-R11b-SM-6M47M 50-59 years, male 685.5
GTEX-14E7W-0011-R11a-SM-5ZZVA 70-79 years, male 682.3
GTEX-11EI6-0011-R11a-SM-DO11V 60-69 years, male 682.2
GTEX-1JJEA-0011-R11a-SM-EXUTE 60-69 years, male 681.7
GTEX-1IGQW-0011-R11a-SM-C1YRV 60-69 years, male 679.9
GTEX-1R9PO-0011-R11b-SM-EZ6NB 60-69 years, female 679.1
GTEX-13PLJ-0011-R11b-SM-5O9BS 60-69 years, female 675.3
GTEX-UTHO-0011-R11A-SM-3GIJE 60-69 years, male 674.1
GTEX-1IKOH-0011-R11a-SM-AHZ38 60-69 years, female 672.6
GTEX-15G19-0011-R11b-SM-6LPIH 60-69 years, male 669.8
GTEX-11DZ1-0011-R11b-SM-DO11W 50-59 years, male 665.4
GTEX-1HB9E-0011-R11b-SM-ARU79 50-59 years, male 661.1
GTEX-QMR6-0011-R11A-SM-32PKK 50-59 years, male 652.3
GTEX-XMD1-0011-R11A-SM-4AT5J 60-69 years, male 652.0
GTEX-X4EP-0011-R11B-SM-4QASK 60-69 years, female 648.7
GTEX-139UW-0011-R11a-SM-5IJGN 60-69 years, male 646.4
GTEX-12ZZX-0011-R11a-SM-5DUVJ 40-49 years, female 643.8
GTEX-NPJ8-0011-R11A-SM-2YUMS 40-49 years, male 636.2
GTEX-15DCD-0011-R11a-SM-D4P1R 70-79 years, female 631.7
GTEX-1IL2U-0011-R11a-SM-CE6SO 60-69 years, male 628.1
GTEX-TSE9-0011-R11A-SM-3DB7N 60-69 years, female 627.9
GTEX-14BIN-0011-R11a-SM-5SI79 50-59 years, female 617.7
GTEX-ZF28-0011-R11a-SM-4WWEI 60-69 years, male 616.5
GTEX-1CAV2-0011-R11a-SM-ARU8D 40-49 years, female 593.8
GTEX-1H1DG-0011-R11a-SM-C1YQK 70-79 years, male 593.8
GTEX-X585-0011-R11B-SM-46MUZ 50-59 years, male 570.1
GTEX-13NYS-0011-R11b-SM-5MR4P 60-69 years, male 566.6
GTEX-OHPN-0011-R11A-SM-2I5FM 60-69 years, female 562.0
GTEX-1JMOU-0011-R11b-SM-EXUTA 60-69 years, female 547.7
GTEX-X4XX-0011-R11A-SM-46MWQ 60-69 years, male 542.6
GTEX-1LKK1-0011-R11a-SM-EXOIG 50-59 years, female 532.4
GTEX-QDT8-0011-R11A-SM-32PKD 30-39 years, female 527.3
GTEX-1HUB1-0011-R11b-SM-CE6SC 60-69 years, male 526.9
GTEX-183WM-0011-R11a-SM-718A5 70-79 years, female 508.8
GTEX-16NPV-0011-R11a-SM-7IGMK 50-59 years, female 463.0
GTEX-14C39-0011-R11b-SM-5YYAF 40-49 years, male 411.8
GTEX-N7MT-0011-R11A-SM-2I3DZ 60-69 years, female 356.9
Show allShow less
Brain - Cerebellum
Average nTPM: 778.5
Samples: 241

Max nTPM: 1144.3
Min nTPM: 409.4
Std nTPM: 131.2
Median nTPM: 783.6
GTEX-131XH-2926-SM-5LZU4 50-59 years, male 1144.3
GTEX-1C6WA-3326-SM-7MKGN 60-69 years, male 1132.4
GTEX-1B8L1-3226-SM-7P8OX 60-69 years, male 1075.0
GTEX-WL46-2826-SM-3LK81 50-59 years, male 1060.2
GTEX-1F75A-2926-SM-7MXVN 50-59 years, male 1050.5
GTEX-11O72-2826-SM-5HL6W 40-49 years, male 1046.3
GTEX-1192X-3226-SM-5987D 50-59 years, male 1039.9
GTEX-12WSC-2926-SM-5BC5Z 50-59 years, male 1035.4
GTEX-1JMQJ-3126-SM-EV79G 50-59 years, male 1020.0
GTEX-1MJK2-3026-SM-EV7A5 50-59 years, male 1010.4
GTEX-1313W-3026-SM-5LZUZ 50-59 years, female 1004.3
GTEX-13OW7-2926-SM-5MR3Z 50-59 years, male 994.1
GTEX-ZYFD-2926-SM-5GID9 50-59 years, male 989.5
GTEX-1GZHY-3026-SM-7MXVA 50-59 years, female 983.2
GTEX-ZUA1-2926-SM-59HL3 40-49 years, male 980.4
GTEX-1H4P4-2726-SM-9JGGB 50-59 years, male 976.8
GTEX-14ABY-3026-SM-664NE 50-59 years, male 974.4
GTEX-13SLX-3226-SM-5YYA6 50-59 years, female 974.0
GTEX-11ZUS-2826-SM-5EQKW 30-39 years, male 969.0
GTEX-12WSE-2926-SM-5RQJ9 20-29 years, male 965.2
GTEX-145MH-2926-SM-5Q5D2 50-59 years, male 965.2
GTEX-11GSP-3126-SM-5A5LL 60-69 years, female 959.4
GTEX-T5JC-2326-SM-32PMR 20-29 years, male 953.6
GTEX-13G51-3126-SM-5IJG7 60-69 years, male 953.4
GTEX-ZAK1-2926-SM-5HL9S 50-59 years, female 951.9
GTEX-1IKOH-2826-SM-CNNRC 60-69 years, female 948.1
GTEX-17EVP-2926-SM-793BU 40-49 years, male 942.3
GTEX-14E6D-2926-SM-664OP 50-59 years, male 941.7
GTEX-1I1CD-2926-SM-A96SJ 60-69 years, female 924.0
GTEX-14JIY-2326-SM-6AJAJ 60-69 years, male 922.9
GTEX-1F75W-3126-SM-7P8SJ 60-69 years, male 922.5
GTEX-1RDX4-3226-SM-DPS14 50-59 years, female 919.9
GTEX-1LSVX-2826-SM-EVR58 60-69 years, male 918.6
GTEX-1I1GV-3026-SM-CNNR9 60-69 years, male 914.0
GTEX-12126-0926-SM-5FQTW 20-29 years, male 913.4
GTEX-ZDXO-2926-SM-4WKFM 60-69 years, male 913.4
GTEX-X261-3126-SM-4PQZC 50-59 years, male 912.3
GTEX-1EMGI-3126-SM-7MXUR 60-69 years, male 911.3
GTEX-131YS-3026-SM-5EGHY 60-69 years, female 909.5
GTEX-1399T-3126-SM-5IJFS 60-69 years, male 906.2
GTEX-13VXU-3026-SM-5LU3K 50-59 years, male 901.6
GTEX-1GN73-3026-SM-7MXV8 60-69 years, male 898.7
GTEX-11NUK-3026-SM-5986K 50-59 years, male 896.5
GTEX-16YQH-2926-SM-6LPJE 30-39 years, male 890.7
GTEX-13NYB-3226-SM-5J2ND 40-49 years, male 888.8
GTEX-12ZZZ-3126-SM-5LZU6 60-69 years, male 888.5
GTEX-1E1VI-2926-SM-7IGLT 50-59 years, male 885.1
GTEX-14PN4-3026-SM-664O4 50-59 years, male 883.1
GTEX-N7MS-2526-SM-2D7W3 60-69 years, male 881.0
GTEX-YJ89-2926-SM-5P9IT 60-69 years, male 880.9
GTEX-13FXS-3026-SM-5LZYO 50-59 years, male 878.3
GTEX-1HBPI-2726-SM-9WPPF 50-59 years, male 877.6
GTEX-13112-2926-SM-5DUWT 50-59 years, male 877.4
GTEX-1IY9M-3126-SM-AHZ3A 60-69 years, male 874.3
GTEX-12ZZY-2926-SM-5DUXO 60-69 years, male 868.5
GTEX-139TS-3126-SM-5LZWX 60-69 years, male 866.4
GTEX-1NV8Z-3026-SM-DTX8Z 60-69 years, male 864.1
GTEX-15EO6-2926-SM-6M48D 50-59 years, male 861.9
GTEX-1JMQK-2926-SM-D4P2T 60-69 years, male 861.2
GTEX-T2IS-2926-SM-32QPO 20-29 years, female 861.1
GTEX-11ONC-3026-SM-5985W 60-69 years, male 859.7
GTEX-Y111-2826-SM-4TT3O 50-59 years, male 859.4
GTEX-1LG7Y-3126-SM-EV7AS 50-59 years, male 856.5
GTEX-145LS-3026-SM-5O99S 60-69 years, female 851.9
GTEX-17F97-2926-SM-7DUEQ 50-59 years, male 851.6
GTEX-13OW5-3126-SM-5MR3Y 60-69 years, male 851.5
GTEX-1H1CY-3026-SM-9OSW7 60-69 years, female 849.2
GTEX-145LU-2626-SM-5LU9Z 50-59 years, male 846.2
GTEX-R55E-2526-SM-2TC6H 20-29 years, male 846.0
GTEX-13O3O-3026-SM-5KM42 60-69 years, female 842.6
GTEX-1EKGG-3126-SM-9WPO5 60-69 years, male 841.7
GTEX-1HBPH-3026-SM-9WPNY 40-49 years, female 841.6
GTEX-13FHO-2926-SM-5L3ES 60-69 years, male 841.4
GTEX-117XS-3126-SM-5GIDP 60-69 years, male 839.8
GTEX-139TT-2626-SM-5LZUB 60-69 years, male 839.7
GTEX-14BMV-2926-SM-5TDEE 50-59 years, male 837.9
GTEX-12WSH-3126-SM-5LZW8 50-59 years, male 834.3
GTEX-1I1HK-2726-SM-AHZ2M 60-69 years, male 834.2
GTEX-15ER7-3026-SM-6M47W 20-29 years, female 833.2
GTEX-1B8SF-3026-SM-731DX 60-69 years, male 832.3
GTEX-1B8SG-1926-SM-73KUB 50-59 years, male 829.3
GTEX-147F4-3026-SM-5Q5BJ 50-59 years, male 827.8
GTEX-13S7M-3026-SM-5S2QQ 60-69 years, female 826.7
GTEX-1PIIG-2826-SM-DTX7O 30-39 years, male 825.4
GTEX-1HCVE-2926-SM-9WPPJ 50-59 years, male 825.2
GTEX-13O3Q-3026-SM-5IJGD 50-59 years, male 824.6
GTEX-14PJM-3026-SM-6LLHM 50-59 years, female 823.8
GTEX-1GZ2Q-3026-SM-9JGG3 40-49 years, male 821.8
GTEX-145MF-2826-SM-7EPGU 50-59 years, male 820.8
GTEX-13X6K-2826-SM-5O9DS 60-69 years, female 820.0
GTEX-1EX96-3126-SM-9JGGC 50-59 years, male 819.9
GTEX-12WSM-2126-SM-5GCOC 60-69 years, male 818.5
GTEX-13QIC-3026-SM-5LU58 60-69 years, female 817.5
GTEX-11NV4-2226-SM-5BC4T 60-69 years, male 816.2
GTEX-1QP6S-3026-SM-EAZ4N 40-49 years, male 815.8
GTEX-1F6I4-3026-SM-7P8SI 60-69 years, male 812.1
GTEX-1C6VR-3026-SM-7IGLW 60-69 years, male 811.6
GTEX-T6MN-2526-SM-32PMN 50-59 years, male 811.1
GTEX-11DXY-3126-SM-5N9BT 60-69 years, male 810.8
GTEX-WHSE-2926-SM-3NMBG 20-29 years, male 808.8
GTEX-1EU9M-2926-SM-793DF 60-69 years, male 808.6
GTEX-13RTJ-3126-SM-5S2Q4 60-69 years, male 808.2
GTEX-1CB4G-2926-SM-7MKFQ 60-69 years, male 804.8
GTEX-1KD4Q-3026-SM-EV7A7 40-49 years, male 804.6
GTEX-14BIM-3126-SM-5Q5C7 60-69 years, female 803.8
GTEX-1H3O1-1826-SM-A96TO 60-69 years, male 803.3
GTEX-11EMC-3326-SM-5P9JH 60-69 years, female 803.2
GTEX-1B933-3026-SM-731DB 50-59 years, female 802.8
GTEX-Z93S-2826-SM-57WBL 50-59 years, male 800.7
GTEX-14ASI-2926-SM-5Q5DG 60-69 years, male 800.1
GTEX-11DXW-1026-SM-5H11K 40-49 years, male 799.9
GTEX-1POEN-2726-SM-E9U6B 30-39 years, female 799.9
GTEX-XLM4-2926-SM-4AT59 60-69 years, male 792.5
GTEX-1H1ZS-2926-SM-9WPP2 70-79 years, male 791.0
GTEX-11GSO-3026-SM-5Q5AL 60-69 years, male 789.9
GTEX-11ZTS-3226-SM-5EGID 60-69 years, female 789.7
GTEX-1GTWX-2926-SM-7MXV4 60-69 years, male 789.2
GTEX-1F6IF-3026-SM-7P8QN 60-69 years, male 787.3
GTEX-14C5O-2926-SM-5RQI1 60-69 years, male 786.4
GTEX-ZAB4-2926-SM-57WCV 40-49 years, male 786.0
GTEX-13N2G-3126-SM-5IJGL 60-69 years, male 783.6
GTEX-17HG3-2826-SM-7EPGO 30-39 years, female 780.9
GTEX-13OVH-2926-SM-5IJFH 70-79 years, male 780.7
GTEX-13CF2-3026-SM-5IFFX 60-69 years, male 779.1
GTEX-12WSD-3026-SM-5LZU7 60-69 years, female 778.7
GTEX-1A3MX-2926-SM-718B7 60-69 years, male 774.9
GTEX-14JG1-2926-SM-686ZK 40-49 years, male 774.0
GTEX-13FHP-2926-SM-5IJG9 50-59 years, male 771.9
GTEX-14E7W-2926-SM-5S2R8 70-79 years, male 769.1
GTEX-13OVL-3026-SM-5IJF1 50-59 years, male 766.4
GTEX-14BIN-3326-SM-5Q5E6 50-59 years, female 766.0
GTEX-13JVG-3226-SM-5IJGJ 60-69 years, male 764.9
GTEX-1R9PO-2826-SM-E6CPV 60-69 years, female 762.9
GTEX-1C64N-3126-SM-79OO3 50-59 years, male 762.7
GTEX-1JJEA-2926-SM-C1YSK 60-69 years, male 762.2
GTEX-11OC5-0626-SM-5HL6M 60-69 years, male 761.9
GTEX-1HSKV-2926-SM-B2LWJ 60-69 years, male 760.5
GTEX-1J1OQ-3126-SM-D4P2O 40-49 years, female 759.6
GTEX-1JMLX-3026-SM-EV79Q 50-59 years, male 758.0
GTEX-111FC-3326-SM-5GZYV 60-69 years, male 757.1
GTEX-18465-2926-SM-7KFSE 50-59 years, male 756.6
GTEX-1JJ6O-3026-SM-C1YQH 60-69 years, male 755.8
GTEX-15DYW-3026-SM-7KFRM 60-69 years, female 755.2
GTEX-13OW6-2926-SM-5KM29 50-59 years, male 752.8
GTEX-13OW8-2926-SM-5L3FV 60-69 years, male 751.8
GTEX-1RNSC-3126-SM-EVR4V 60-69 years, male 751.8
GTEX-S7SE-2526-SM-2XCDL 50-59 years, male 749.9
GTEX-16Z82-2926-SM-6LPJJ 60-69 years, male 749.5
GTEX-17HHY-2926-SM-79OJW 50-59 years, male 747.3
GTEX-17HII-2926-SM-79OMK 50-59 years, male 746.8
GTEX-14JFF-2826-SM-6871Q 60-69 years, male 746.6
GTEX-17EVQ-2726-SM-7EWDT 70-79 years, male 746.3
GTEX-WWYW-3026-SM-3NB36 50-59 years, female 744.2
GTEX-WZTO-2826-SM-3NM8P 40-49 years, male 742.7
GTEX-17JCI-3026-SM-7EWDR 60-69 years, female 742.1
GTEX-UTHO-2926-SM-3P5Z9 60-69 years, male 741.0
GTEX-1RQEC-3026-SM-DPRXM 60-69 years, male 739.2
GTEX-WVLH-2926-SM-3MJG5 50-59 years, male 738.8
GTEX-15SHU-3026-SM-6LPIB 40-49 years, female 735.4
GTEX-1GF9V-3026-SM-7P8R8 60-69 years, male 735.3
GTEX-11DYG-2926-SM-5H132 60-69 years, male 735.1
GTEX-Q2AG-2826-SM-2HMJQ 40-49 years, female 735.0
GTEX-1IDJH-3126-SM-C1YQS 70-79 years, male 732.7
GTEX-1PWST-3026-SM-EAZ3H 70-79 years, male 729.1
GTEX-14DAQ-3026-SM-5S2QZ 60-69 years, female 725.2
GTEX-144GL-2926-SM-5O99F 50-59 years, male 723.1
GTEX-P44G-2526-SM-2I5EK 30-39 years, male 722.9
GTEX-11PRG-2826-SM-5BC54 50-59 years, male 721.7
GTEX-13X6J-2926-SM-7EPGP 50-59 years, male 713.2
GTEX-ZAJG-3026-SM-5HL92 50-59 years, female 713.2
GTEX-YFC4-3026-SM-5IFJK 40-49 years, female 707.5
GTEX-11ZVC-3026-SM-59HJM 50-59 years, female 706.7
GTEX-1JN1M-3126-SM-AHZ4E 60-69 years, female 703.4
GTEX-1R46S-3126-SM-DPRZ9 60-69 years, female 700.2
GTEX-1QEPI-3026-SM-EXOIW 60-69 years, female 699.4
GTEX-15G19-2826-SM-6M48K 60-69 years, male 696.0
GTEX-1IL2V-3026-SM-CYPSA 70-79 years, male 695.1
GTEX-1B996-2926-SM-7MXUH 60-69 years, male 693.7
GTEX-1128S-2826-SM-5N9DI 60-69 years, female 690.3
GTEX-16XZZ-2926-SM-6LPK4 60-69 years, male 688.2
GTEX-132Q8-2926-SM-5IFFP 60-69 years, male 685.7
GTEX-11TTK-2826-SM-5GU5K 60-69 years, female 684.9
GTEX-11EI6-2926-SM-5985U 60-69 years, male 682.5
GTEX-Y8DK-0726-SM-4TT3S 60-69 years, male 682.2
GTEX-X4EP-3026-SM-3P5YP 60-69 years, female 682.1
GTEX-PVOW-2626-SM-32PL8 40-49 years, male 680.0
GTEX-13X6I-2926-SM-5Q5C3 60-69 years, male 679.9
GTEX-145MG-3126-SM-5Q5D3 50-59 years, male 679.3
GTEX-1JMPZ-2826-SM-C1YRA 30-39 years, male 678.7
GTEX-1EH9U-3126-SM-7MXU5 60-69 years, male 677.0
GTEX-13PVQ-2926-SM-5L3HJ 50-59 years, male 674.9
GTEX-QVJO-1325-SM-2S1QX 60-69 years, female 672.6
GTEX-1P4AB-3026-SM-EXOJS 50-59 years, male 671.6
GTEX-1A8G6-3126-SM-731D8 60-69 years, male 671.3
GTEX-1KWVE-2226-SM-CXZKN 30-39 years, male 665.1
GTEX-18A6Q-2826-SM-7LTAO 60-69 years, male 663.5
GTEX-ZYY3-3026-SM-5GIEJ 60-69 years, female 661.9
GTEX-1F48J-2726-SM-7P8PW 50-59 years, female 659.8
GTEX-1E2YA-2926-SM-7MGWX 50-59 years, male 658.8
GTEX-RNOR-2226-SM-2TF5O 50-59 years, female 656.8
GTEX-QVUS-2926-SM-3GIJB 60-69 years, female 655.4
GTEX-147GR-3126-SM-5S2PM 60-69 years, male 654.5
GTEX-QDT8-3026-SM-32PKB 30-39 years, female 649.3
GTEX-11DZ1-2926-SM-5A5KI 50-59 years, male 645.5
GTEX-13OVJ-2726-SM-5IJG6 50-59 years, female 643.6
GTEX-12ZZX-2826-SM-5BC6K 40-49 years, female 642.3
GTEX-P44H-2426-SM-2XCEJ 40-49 years, male 637.3
GTEX-1H1DG-2826-SM-9JGHB 70-79 years, male 634.7
GTEX-ZVT3-2926-SM-5GU6M 60-69 years, female 634.4
GTEX-PWO3-1026-SM-2I5F2 60-69 years, female 632.5
GTEX-1KANB-3226-SM-D4P3G 50-59 years, male 628.2
GTEX-N7MT-1226-SM-DKPOK 60-69 years, female 628.1
GTEX-XMD1-2826-SM-4AT5F 60-69 years, male 624.7
GTEX-1F52S-3026-SM-7P8PV 60-69 years, female 611.0
GTEX-1GF9W-2726-SM-9JGGW 60-69 years, male 610.7
GTEX-1HSMO-2926-SM-C1YR5 60-69 years, male 610.1
GTEX-X4XX-2926-SM-3NMB1 60-69 years, male 608.1
GTEX-NPJ8-2626-SM-2D7W2 40-49 years, male 599.8
GTEX-1EWIQ-3026-SM-7IGOJ 70-79 years, female 599.2
GTEX-1GZ4I-2926-SM-9JGGO 50-59 years, male 591.9
GTEX-13JUV-3026-SM-5K7WX 40-49 years, female 591.3
GTEX-TSE9-2926-SM-3DB77 60-69 years, female 585.3
GTEX-QMR6-1326-SM-32PLB 50-59 years, male 582.9
GTEX-14C39-3026-SM-5S2QE 40-49 years, male 578.2
GTEX-1CB4H-3026-SM-79OLX 60-69 years, female 578.0
GTEX-1269C-3126-SM-5EGI6 60-69 years, female 574.8
GTEX-1H3NZ-2926-SM-9WPQ8 60-69 years, male 569.7
GTEX-RU72-2926-SM-2TF66 50-59 years, female 567.6
GTEX-1A8G7-3026-SM-73KTT 60-69 years, male 567.1
GTEX-183WM-2726-SM-7KFRF 70-79 years, female 562.2
GTEX-1JMOU-2826-SM-EV79R 60-69 years, female 551.0
GTEX-ZF28-2926-SM-4WKG1 60-69 years, male 544.2
GTEX-1BAJH-3126-SM-7MGXY 70-79 years, male 532.7
GTEX-NPJ7-2826-SM-2I3FU 60-69 years, female 515.4
GTEX-OHPN-2626-SM-2I5H1 60-69 years, female 514.7
GTEX-14A5I-2826-SM-5SIBF 50-59 years, female 508.1
GTEX-1HB9E-3126-SM-AHZ4M 50-59 years, male 506.0
GTEX-1H3VE-2826-SM-9WPOL 40-49 years, male 480.7
GTEX-1JJE9-3026-SM-CNNPA 70-79 years, male 452.4
GTEX-14PJO-2926-SM-686ZI 60-69 years, male 443.9
GTEX-ZZPT-2926-SM-5EQ5S 50-59 years, male 409.4
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CEREBELLUM - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

584.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Cerebellum
Scaled Tags Per Million: 584.2
FF:10083-102B2 22-68 years, mixed 732.8
FF:10166-103B4 76 years, female 435.6

CEREBELLUM - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

510.9
Pig sample Sample description nTPM
Cerebellum
nTPM: 510.9
Samples: 4

Max nTPM: 823.4
Min nTPM: 375.6
Sample A Female 823.4
Sample B Female 426.0
Sample C Male 375.6
Sample D Male 418.5

CEREBELLUM - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

671.5
Mouse sample Sample description nTPM
Cerebellum
nTPM: 671.5
Samples: 4

Max nTPM: 698.1
Min nTPM: 647.4
Sample A Male 698.1
Sample B Male 647.4
Sample C Female 671.3
Sample D Female 669.3

CEREBELLUM - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

25.0
Allen experiment id Experiment description Expression energy
Cerebellum
Expression energy: 25.0
112197625 Antisense, RP_110421_01_F07, Mouse strain C57BL/6J (56 days, male) 29.5
79360272 Antisense, RP_071018_01_G01, Mouse strain C57BL/6J (56 days, male) 20.6

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