PONS AND MEDULLA - Expression summary
Mouse brain, Intensity
Medulla oblongatai 		59.332
Mouse brain, Intensity
Ponsi 		60.337
RNA expressioni
HPA Brain:543.8 nTPM
FANTOM5:441.1 Scaled Tags Per Million
Pig:488.6 nTPM
Mouse:630.6 nTPM
Allen mouse:20.1 Expression energy

MEDULLA OBLONGATA - Mouse brain profilei , antibody CAB079023
Medulla oblongata mean intensity 59.332
intensityi
FRONT BACK
Nucleus of the solitary tract 59.332
Raphe magnus nucleus 11.553
Cochlear nucleus 17.261
Lateral paragigantocellular nucleus 23.175
Raphe pallidus nucleus 22.290
Facial nucleus 25.586
Hypoglossal nucleus 33.748
Ambiguus nucleus 35.983
External cuneate nucleus 17.993
Inferior olivary nucleus 26.479
Raphe obscures nucleus 40.959
Dorsal motor nucleus of vagus 47.053
Barrington's nucleus -
Koelliker-fuse nucleus -
Motor tregiminal nucleus 21.126
Parabrachial nucleus 60.337
Principle sensory trigeminal nucleus 22.267
Locus coeruleus 52.089
Pontine nucleus 29.875
Vestibular nucleus 34.647
Pontine reticular nucleus, oral 13.757
Lateral lemniscus 31.970
Superior paraolivary nucleus 19.651

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 543.8
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 267.7
1984 Male, age 76, both hemispheres 359.7
2301 Female, age 85, both hemispheres 247.3
2188 Female, age 91, both hemispheres 245.7
2090 Male, age 80, both hemispheres 218.0
Area postrema
nTPM: 167.1
2054 Male, age 76, both hemispheres 263.9
2799 Male, age 61, both hemispheres 125.5
2306 Male, age 80, both hemispheres 111.9
Dorsal cochlear nucleus
nTPM: 250.9
2058 Male, age 76, both hemispheres 294.4
2187 Female, age 91, both hemispheres 278.4
2370 Male, age 61, both hemispheres 271.7
2802 Male, age 74, right hemisphere 231.7
2378 Male, age 80, both hemispheres 178.3
Dorsal medullary reticular nucleus
nTPM: 329.5
2040 Female, age 85, both hemispheres 450.2
2373 Male, age 61, both hemispheres 270.1
2088 Male, age 76, both hemispheres 268.2
Dorsal motor vagal complex
nTPM: 286.8
2133 Female, age 91, both hemispheres 511.2
2000 Male, age 74, unknown 396.3
2844 Male, age 55, unknown 374.2
2813 Female, age 72, unknown 266.7
2643 Male, age 74, both hemispheres 203.4
2185 Male, age 76, both hemispheres 191.1
2797 Male, age 61, both hemispheres 189.6
2807 Female, age 85, both hemispheres 161.4
Dorsal tegmental nucleus
nTPM: 257.6
2083 Male, age 80, both hemispheres 326.1
1936 Male, age 76, left hemisphere 256.7
2326 Male, age 74, both hemispheres 230.7
2358 Male, age 61, both hemispheres 216.8
Dorsolateral tegmental area
nTPM: 274.5
2751 Female, age 85, both hemispheres 322.2
2654 Male, age 80, both hemispheres 311.5
2141 Male, age 76, both hemispheres 301.2
2360 Male, age 74, both hemispheres 277.3
2337 Male, age 61, both hemispheres 160.3
Gigantocellular reticular nuclei, medullary
nTPM: 349.1
2462 Male, age 74, both hemispheres 566.2
2022 Male, age 76, right hemisphere 348.3
2310 Male, age 80, both hemispheres 338.9
1876 Female, age 85, both hemispheres 331.0
2314 Male, age 61, both hemispheres 258.9
2387 Female, age 91, both hemispheres 251.4
Gigantocellular reticular nuclei, pars
nTPM: 371.2
2168 Male, age 76, both hemispheres 535.9
2336 Male, age 61, both hemispheres 385.4
2084 Female, age 85, both hemispheres 382.6
2706 Male, age 80, both hemispheres 277.6
2330 Male, age 80, both hemispheres 274.5
Inferior olive
nTPM: 213.6
2085 Female, age 85, both hemispheres 291.7
2563 Male, age 74, both hemispheres 211.5
2178 Male, age 61, both hemispheres 209.5
2628 Female, age 91, both hemispheres 197.1
2379 Male, age 80, both hemispheres 158.1
Kolliker-Fuse nucleus
nTPM: 353.2
2163 Male, age 80, both hemispheres 528.1
2793 Female, age 91, left hemisphere 296.5
2315 Male, age 76, right hemisphere 235.0
Lateral lemniscal nuclei
nTPM: 458.1
2036 Male, age 80, both hemispheres 539.7
2169 Male, age 76, both hemispheres 522.7
2746 Female, age 85, left hemisphere 486.2
2453 Male, age 74, right hemisphere 461.0
2320 Female, age 91, left hemisphere 280.8
Lateral medullary reticular nucleus
nTPM: 288.1
2044 Male, age 76, both hemispheres 441.8
2804 Female, age 91, both hemispheres 281.0
2190 Female, age 85, both hemispheres 276.1
2374 Male, age 61, both hemispheres 271.9
2305 Male, age 74, both hemispheres 263.3
2852 Male, age 80, both hemispheres 194.4
Lateral parabrachial nucleus
nTPM: 346.0
2139 Female, age 85, right hemisphere 523.0
2013 Male, age 80, both hemispheres 345.5
2790 Male, age 61, both hemispheres 345.3
2792 Male, age 76, both hemispheres 170.4
Lateral vestibular nucleus
nTPM: 369.4
2184 Male, age 76, both hemispheres 488.8
2311 Male, age 80, both hemispheres 250.1
Locus coeruleus
nTPM: 470.1
2123 Female, age 91, both hemispheres 632.4
2720 Male, age 74, both hemispheres 533.2
2014 Male, age 55, unknown 509.1
2317 Female, age 72, unknown 435.9
2788 Male, age 74, unknown 407.6
1980 Male, age 76, both hemispheres 393.2
2162 Male, age 80, both hemispheres 379.3
Medial olivary nucleus
nTPM: 166.6
2851 Male, age 80, both hemispheres 194.6
1962 Male, age 76, both hemispheres 178.7
2138 Female, age 91, both hemispheres 168.0
1943 Male, age 61, both hemispheres 125.2
Medial parabrachial nucleus
nTPM: 332.0
2156 Male, age 61, both hemispheres 365.1
2854 Male, age 80, both hemispheres 344.9
2170 Female, age 91, both hemispheres 342.7
2463 Female, age 85, right hemisphere 330.7
2786 Male, age 76, both hemispheres 276.8
Medial periolivary nuclei
nTPM: 435.7
2171 Female, age 85, both hemispheres 677.4
2063 Male, age 76, both hemispheres 594.3
2791 Male, age 74, right hemisphere 384.4
2081 Male, age 80, both hemispheres 288.2
2458 Female, age 91, both hemispheres 233.9
Medial vestibular nucleus
nTPM: 419.6
2134 Male, age 76, both hemispheres 515.3
2624 Male, age 61, both hemispheres 441.7
2093 Male, age 80, both hemispheres 411.9
2743 Female, age 85, both hemispheres 410.0
2803 Female, age 91, both hemispheres 369.9
2801 Male, age 74, both hemispheres 368.8
Motor facial nucleus
nTPM: 416.9
2062 Male, age 76, both hemispheres 616.0
2365 Male, age 74, right hemisphere 486.6
2327 Male, age 80, both hemispheres 400.9
2697 Female, age 85, both hemispheres 371.7
2126 Male, age 61, both hemispheres 353.3
2795 Female, age 91, both hemispheres 273.1
Motor hypoglossal nucleus
nTPM: 349.1
2125 Female, age 91, both hemispheres 440.7
2132 Female, age 85, both hemispheres 398.8
2461 Male, age 61, both hemispheres 353.0
2182 Male, age 80, both hemispheres 278.4
2277 Male, age 76, both hemispheres 274.6
Motor trigeminal nucleus
nTPM: 336.7
2079 Male, age 80, both hemispheres 478.5
2560 Male, age 74, both hemispheres 365.7
2335 Male, age 61, both hemispheres 310.0
2309 Male, age 76, both hemispheres 284.4
2321 Female, age 91, both hemispheres 244.9
Nuclei of the trapezoid body
nTPM: 528.4
2159 Male, age 61, both hemispheres 771.3
2735 Female, age 85, both hemispheres 672.5
1983 Male, age 76, both hemispheres 533.4
2166 Male, age 80, both hemispheres 381.1
2368 Female, age 91, both hemispheres 283.8
Nucleus ambiguus
nTPM: 346.9
2096 Female, age 85, both hemispheres 495.0
2071 Male, age 76, both hemispheres 198.8
Nucleus cuneatus
nTPM: 251.3
2131 Male, age 76, both hemispheres 434.0
2100 Male, age 76, both hemispheres 348.5
2564 Male, age 74, both hemispheres 292.4
2376 Male, age 61, both hemispheres 288.6
2562 Male, age 61, both hemispheres 267.5
2381 Male, age 80, both hemispheres 200.8
2805 Female, age 91, both hemispheres 156.8
2808 Female, age 85, both hemispheres 139.2
2380 Male, age 80, both hemispheres 133.7
Nucleus gracilis
nTPM: 147.5
2627 Male, age 74, both hemispheres 208.9
2382 Male, age 80, both hemispheres 122.1
2299 Female, age 85, both hemispheres 111.5
Nucleus raphe magnus
nTPM: 543.8
2160 Male, age 61, both hemispheres 900.5
2172 Female, age 85, both hemispheres 692.9
2455 Male, age 74, both hemispheres 569.3
2328 Male, age 80, both hemispheres 395.8
2051 Male, age 76, both hemispheres 394.2
2459 Female, age 91, both hemispheres 310.2
Nucleus raphe obscurus
nTPM: 278.7
2800 Male, age 61, midline 399.2
2845 Female, age 85, midline 305.1
2142 Male, age 76, midline 131.9
Nucleus raphe pallidus
nTPM: 278.6
2183 Male, age 80, midline 362.9
1924 Male, age 61, midline 329.3
2145 Male, age 76, midline 143.6
Nucleus tractus solitarii
nTPM: 286.9
2144 Female, age 91, right hemisphere 361.0
2656 Male, age 76, both hemispheres 303.6
2191 Female, age 85, both hemispheres 253.2
2307 Male, age 80, both hemispheres 229.8
Paramedian reticular nucleus
nTPM: 402.7
2050 Female, age 85, both hemispheres 523.2
2313 Male, age 61, both hemispheres 430.8
2057 Male, age 80, both hemispheres 418.4
2052 Male, age 76, both hemispheres 238.2
Parvicellular reticular nuclei
nTPM: 382.4
2558 Male, age 74, both hemispheres 460.8
2119 Male, age 80, both hemispheres 365.9
2095 Male, age 76, both hemispheres 320.5
Parvicellular reticular nuclei, medullary
nTPM: 422.0
2189 Female, age 91, both hemispheres 460.0
2091 Female, age 85, both hemispheres 445.5
2181 Male, age 80, left hemisphere 360.4
Pedunculopontine tegmental nucleus
nTPM: 303.4
1921 Female, age 85, both hemispheres 347.2
2334 Male, age 80, both hemispheres 305.9
2338 Male, age 61, both hemispheres 257.0
Peritrigeminal nucleus
nTPM: 379.8
2179 Male, age 61, both hemispheres 422.8
2067 Female, age 85, both hemispheres 363.9
2136 Male, age 76, both hemispheres 352.7
Pontine nuclei
nTPM: 526.9
2727 Male, age 61, right hemisphere 841.6
2787 Female, age 85, both hemispheres 721.0
1863 Male, age 55, unknown 621.6
2109 Female, age 72, unknown 545.6
1968 Male, age 76, left hemisphere 506.9
2454 Male, age 74, left hemisphere 382.4
2115 Male, age 80, left hemisphere 333.6
2319 Female, age 91, both hemispheres 262.5
Pontine raphe nucleus
nTPM: 444.1
2122 Female, age 85, midline 547.4
2853 Male, age 76, midline 340.7
Posteroventral cochlear nucleus
nTPM: 264.2
2752 Female, age 85, both hemispheres 438.9
2070 Male, age 76, both hemispheres 328.3
2371 Male, age 61, both hemispheres 249.8
2341 Male, age 80, both hemispheres 163.5
2135 Female, age 91, both hemispheres 140.7
Prepositus hypoglossal nucleus
nTPM: 331.6
2855 Female, age 85, right hemisphere 388.9
2086 Male, age 80, both hemispheres 274.3
Principal sensory trigeminal nucleus
nTPM: 484.3
2158 Male, age 61, both hemispheres 759.6
2008 Male, age 80, left hemisphere 529.1
2324 Male, age 76, both hemispheres 380.6
2367 Female, age 91, left hemisphere 268.1
Reticular pontine nucleus, caudal
nTPM: 356.0
2332 Male, age 80, right hemisphere 473.5
2092 Male, age 76, both hemispheres 407.4
2559 Male, age 74, both hemispheres 293.9
2457 Female, age 91, both hemispheres 249.1
Reticular pontine nucleus, oral
nTPM: 368.2
2361 Male, age 74, both hemispheres 498.5
2012 Female, age 85, both hemispheres 463.9
1939 Male, age 80, both hemispheres 349.3
2167 Male, age 76, both hemispheres 299.6
2366 Female, age 91, both hemispheres 229.6
Reticulotegmental nucleus
nTPM: 351.3
2325 Male, age 76, both hemispheres 431.0
2452 Male, age 74, both hemispheres 357.9
2333 Male, age 80, both hemispheres 320.0
2322 Female, age 91, both hemispheres 296.5
Spinal trigeminal nucleus, caudal
nTPM: 366.4
2390 Female, age 91, both hemispheres 638.9
2447 Male, age 76, both hemispheres 408.3
2642 Male, age 74, both hemispheres 281.2
2308 Male, age 80, both hemispheres 255.7
2312 Male, age 61, both hemispheres 248.1
Spinal trigeminal nucleus, interpolar
nTPM: 525.1
2625 Male, age 61, both hemispheres 882.0
2066 Male, age 76, right hemisphere 577.1
2033 Male, age 80, both hemispheres 404.0
2389 Female, age 91, both hemispheres 400.5
2386 Female, age 85, both hemispheres 362.0
Spinal trigeminal nucleus, oral
nTPM: 394.7
2737 Female, age 85, both hemispheres 454.1
2164 Male, age 80, both hemispheres 427.6
1978 Male, age 76, both hemispheres 302.3
Spinal vestibular nucleus
nTPM: 325.7
2186 Female, age 91, both hemispheres 402.1
2780 Male, age 80, both hemispheres 381.7
2806 Female, age 85, both hemispheres 307.1
2796 Male, age 61, both hemispheres 295.1
2748 Male, age 76, both hemispheres 292.5
2384 Male, age 74, both hemispheres 275.8
Subcoeruleus area
nTPM: 349.7
2323 Female, age 91, left hemisphere 414.9
2089 Male, age 76, left hemisphere 405.1
1958 Male, age 80, both hemispheres 402.5
2451 Male, age 74, both hemispheres 272.5
2369 Female, age 85, left hemisphere 253.5
Superior olive
nTPM: 424.4
1875 Female, age 85, both hemispheres 600.9
2364 Male, age 74, right hemisphere 468.2
2020 Male, age 76, both hemispheres 393.8
2329 Male, age 80, right hemisphere 354.8
2561 Female, age 91, both hemispheres 304.1
Superior vestibular nucleus
nTPM: 286.4
2015 Male, age 80, both hemispheres 345.5
2061 Male, age 76, both hemispheres 284.2
2383 Male, age 74, both hemispheres 229.7
Ventral medullary reticular nucleus
nTPM: 315.1
2372 Male, age 61, both hemispheres 324.7
2060 Male, age 76, both hemispheres 305.4
Ventral periolivary nuclei
nTPM: 454.4
2130 Female, age 85, both hemispheres 577.6
2165 Male, age 80, both hemispheres 523.4
2023 Male, age 76, both hemispheres 370.8
2794 Female, age 91, left hemisphere 345.7
Ventrolateral medulla, A1-C1 cell groups
nTPM: 339.3
2741 Female, age 85, both hemispheres 422.0
1986 Male, age 76, both hemispheres 419.2
2180 Male, age 61, both hemispheres 354.8
2302 Female, age 91, both hemispheres 285.6
2118 Male, age 80, both hemispheres 214.8
Ventrolateral tegmental area, A5 NE cell group
nTPM: 361.3
2449 Male, age 74, both hemispheres 509.2
1959 Male, age 76, both hemispheres 402.5
2840 Female, age 85, both hemispheres 388.2
2161 Male, age 80, both hemispheres 353.5
2359 Male, age 61, both hemispheres 291.6
2456 Female, age 91, both hemispheres 223.0

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 441.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 216.9
FF:10182-103D2 60 years, female 232.3
FF:10165-103B3 76 years, female 201.5
Medulla oblongata
Scaled Tags Per Million: 156.0
FF:10038-101F2 18-64 years, mixed 253.4
FF:10155-103A2 76 years, female 132.2
FF:10174-103C3 60 years, female 82.6
Pons
Scaled Tags Per Million: 441.1
FF:10033-101E6 18-54 years, mixed 441.1

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 488.6
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 291.6
Samples: 4

Max nTPM: 344.9
Min nTPM: 162.6
Sample A Female 344.1
Sample B Female 344.9
Sample C Male 314.6
Sample D Male 162.6
Pons
nTPM: 488.6
Samples: 4

Max nTPM: 715.6
Min nTPM: 388.0
Sample A Female 715.6
Sample B Female 388.0
Sample C Male 438.9
Sample D Male 411.8

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 630.6
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 630.6
Samples: 4

Max nTPM: 652.5
Min nTPM: 600.0
Sample A Male 652.5
Sample B Male 631.5
Sample C Female 638.2
Sample D Female 600.0

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 20.1
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 20.1
112197625 Antisense, RP_110421_01_F07, Mouse strain C57BL/6J (56 days, male) 22.7
79360272 Antisense, RP_071018_01_G01, Mouse strain C57BL/6J (56 days, male) 17.5
Pons
Expression energy: 18.9
112197625 Antisense, RP_110421_01_F07, Mouse strain C57BL/6J (56 days, male) 20.6
79360272 Antisense, RP_071018_01_G01, Mouse strain C57BL/6J (56 days, male) 17.2

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