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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:356.1 nTPM
HPA Brain:1880.6 nTPM
GTEx:356.1 nTPM
FANTOM5:1550.0 Scaled Tags Per Million
Pig:1276.1 nTPM
Mouse:691.2 nTPM
Allen mouse:7.9 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA002989Antibody HPA003020Antibody CAB002306
Glial cells LowLowHigh
Neuronal cells LowNot detected-






BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1880.6
Sample id Sample description nTPM
Caudate nucleus
nTPM: 538.3
2481 Female, age 94, left hemisphere 785.2
2289 Male, age 61, right hemisphere 678.2
1854 Male, age 80, left hemisphere 543.0
2290 Female, age 72, unknown 539.4
2288 Male, age 75, left hemisphere 533.4
1781 Male, age 74, unknown 456.7
2846 Female, age 79, unknown 414.2
1857 Female, age 85, left hemisphere 356.6
Globus pallidus, externus
nTPM: 1880.6
1996 Male, age 80, right hemisphere 2747.6
2646 Male, age 61, right hemisphere 2493.6
2772 Female, age 79, unknown 1746.5
2395 Male, age 75, both hemispheres 1284.6
2567 Female, age 72, unknown 1130.9
Globus pallidus, internus
nTPM: 1810.8
2483 Female, age 94, right hemisphere 2561.0
2037 Male, age 80, right hemisphere 2268.8
1818 Male, age 74, unknown 1929.6
2287 Male, age 75, right hemisphere 1801.0
2778 Female, age 91, both hemispheres 1445.3
2566 Female, age 72, unknown 1397.7
2111 Female, age 85, right hemisphere 1272.1
Nucleus accumbens
nTPM: 457.8
2698 Female, age 72, unknown 689.2
2732 Male, age 80, right hemisphere 681.4
2391 Female, age 94, left hemisphere 454.6
2286 Male, age 75, left hemisphere 441.3
1856 Female, age 91, right hemisphere 376.3
1783 Male, age 74, unknown 363.4
1806 Female, age 85, left hemisphere 358.3
2824 Male, age 61, right hemisphere 298.1
Nucleus basalis of Meynert
nTPM: 1129.7
2569 Male, age 61, both hemispheres 2475.8
2821 Male, age 75, both hemispheres 767.5
2393 Male, age 80, right hemisphere 647.1
2484 Female, age 94, left hemisphere 628.7
Nucleus of the diagonal band
nTPM: 290.8
1812 Female, age 91, both hemispheres 659.2
1979 Male, age 74, unknown 286.2
2195 Female, age 85, both hemispheres 171.3
2775 Male, age 80, right hemisphere 171.3
2029 Male, age 61, right hemisphere 165.9
Putamen
nTPM: 401.1
1829 Male, age 74, unknown 511.3
2482 Female, age 94, left hemisphere 508.2
1838 Male, age 80, right hemisphere 457.6
2489 Female, age 72, unknown 419.1
2466 Female, age 79, unknown 336.2
1937 Female, age 91, right hemisphere 310.8
2647 Male, age 75, left hemisphere 264.6
Septal nuclei
nTPM: 466.9
2199 Male, age 80, right hemisphere 910.7
2394 Male, age 61, left hemisphere 741.6
2629 Female, age 94, right hemisphere 577.1
2009 Female, age 91, both hemispheres 388.6
2059 Female, age 85, both hemispheres 308.5
2031 Female, age 72, unknown 210.1
1960 Male, age 74, unknown 131.7
Stria terminalis, bed nucleus
nTPM: 688.6
2201 Male, age 74, unknown 1597.7
2486 Female, age 94, both hemispheres 291.4
1974 Female, age 91, both hemispheres 176.6

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

356.1
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 356.1
Samples: 246

Max nTPM: 925.2
Min nTPM: 110.4
Std nTPM: 154.4
Median nTPM: 325.1
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 925.2
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 916.2
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 853.3
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 805.5
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 765.9
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 728.4
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 707.1
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 687.1
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 661.7
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 654.2
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 653.3
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 648.7
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 644.0
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 633.8
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 624.2
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 620.2
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 606.3
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 604.7
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 600.6
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 589.1
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 587.0
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 582.2
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 579.5
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 577.7
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 576.6
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 575.2
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 574.0
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 569.0
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 561.6
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 560.7
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 558.6
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 554.6
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 554.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 551.3
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 545.6
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 543.9
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 540.2
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 537.3
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 518.3
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 510.7
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 502.6
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 492.2
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 487.2
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 484.0
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 483.2
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 483.0
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 482.7
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 475.8
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 475.0
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 472.1
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 471.7
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 471.2
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 469.1
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 465.4
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 463.8
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 458.8
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 457.4
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 457.2
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 455.8
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 450.6
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 447.6
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 447.4
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 447.3
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 445.5
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 444.2
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 443.2
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 435.3
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 433.4
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 431.9
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 419.8
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 418.0
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 417.3
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 410.2
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 405.4
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 404.2
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 401.4
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 401.3
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 400.3
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 394.8
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 393.6
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 393.4
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 392.0
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 391.6
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 389.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 388.9
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 388.7
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 386.4
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 382.7
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 380.5
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 378.9
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 377.1
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 375.8
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 373.0
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 371.3
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 370.9
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 370.8
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 370.7
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 369.8
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 369.7
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 369.7
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 368.6
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 367.3
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 363.3
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 362.5
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 361.2
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 356.5
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 353.9
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 350.2
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 349.1
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 348.2
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 345.2
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 344.5
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 344.4
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 338.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 338.2
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 337.7
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 334.9
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 333.3
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 330.6
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 327.8
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 326.8
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 325.7
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 325.4
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 324.7
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 322.8
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 319.8
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 319.7
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 318.5
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 318.4
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 317.7
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 317.5
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 316.1
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 314.3
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 313.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 312.2
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 311.9
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 311.0
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 310.1
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 308.1
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 307.2
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 305.9
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 304.6
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 301.1
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 296.3
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 296.0
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 293.1
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 292.7
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 292.3
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 290.4
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 283.7
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 282.2
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 281.0
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 279.3
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 276.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 275.8
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 275.1
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 273.1
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 272.6
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 271.6
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 271.1
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 270.8
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 267.3
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 265.4
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 263.9
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 263.3
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 262.2
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 261.6
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 261.5
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 258.9
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 257.9
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 257.3
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 254.7
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 254.2
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 251.3
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 248.3
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 248.3
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 248.0
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 247.7
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 246.7
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 243.4
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 242.3
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 241.7
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 240.6
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 240.1
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 238.0
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 237.9
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 237.6
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 236.8
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 235.9
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 234.9
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 231.4
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 231.3
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 230.9
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 229.0
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 228.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 228.4
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 227.9
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 227.2
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 227.1
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 226.8
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 226.2
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 223.4
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 222.8
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 221.3
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 219.7
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 216.8
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 215.1
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 214.4
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 213.4
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 212.5
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 211.6
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 209.2
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 207.4
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 207.0
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 204.6
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 204.3
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 200.2
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 198.1
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 194.4
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 192.4
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 191.9
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 188.9
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 188.7
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 178.6
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 176.4
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 171.8
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 170.8
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 170.1
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 167.9
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 166.3
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 157.3
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 157.2
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 156.3
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 156.2
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 155.4
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 152.6
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 151.9
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 147.2
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 142.3
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 129.9
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 127.7
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 125.4
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 124.5
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 122.9
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 112.0
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 110.4
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 278.2
Samples: 246

Max nTPM: 1072.9
Min nTPM: 68.4
Std nTPM: 147.0
Median nTPM: 253.9
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 1072.9
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 872.0
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 815.5
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 772.1
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 747.0
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 723.8
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 690.3
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 660.6
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 629.7
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 590.2
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 571.3
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 571.1
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 566.2
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 559.0
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 541.3
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 532.1
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 526.6
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 517.1
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 501.0
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 489.4
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 486.1
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 478.3
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 436.0
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 434.7
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 429.7
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 421.9
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 418.4
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 411.4
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 408.2
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 405.0
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 404.7
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 404.4
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 399.9
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 399.0
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 391.2
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 391.0
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 388.5
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 388.4
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 387.6
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 385.0
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 383.7
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 382.4
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 382.1
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 380.5
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 380.1
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 377.7
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 375.1
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 371.2
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 371.0
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 370.2
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 370.0
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 368.6
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 366.2
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 361.7
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 358.3
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 357.2
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 356.9
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 352.7
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 351.9
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 344.0
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 340.1
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 331.8
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 331.2
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 330.8
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 329.5
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 329.3
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 327.9
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 327.7
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 325.6
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 323.5
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 313.9
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 307.0
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 306.9
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 305.8
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 304.0
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 303.7
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 302.5
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 302.4
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 301.0
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 300.4
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 299.2
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 298.8
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 298.1
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 297.7
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 295.3
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 292.7
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 292.4
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 291.2
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 289.7
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 289.5
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 289.1
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 287.3
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 286.0
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 285.5
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 283.1
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 281.8
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 281.2
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 278.0
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 277.5
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 276.0
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 275.0
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 275.0
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 274.6
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 272.9
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 272.4
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 272.1
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 270.3
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 268.5
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 268.5
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 268.4
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 266.3
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 266.2
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 264.8
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 264.7
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 264.1
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 262.2
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 260.6
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 260.2
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 259.8
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 259.8
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 259.1
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 256.8
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 254.2
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 253.6
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 248.6
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 247.7
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 247.1
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 245.9
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 243.1
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 242.7
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 240.6
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 240.0
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 239.0
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 238.8
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 238.7
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 237.8
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 237.6
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 236.7
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 236.1
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 233.2
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 233.2
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 232.2
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 230.5
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 229.8
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 229.5
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 228.8
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 228.6
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 225.5
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 223.7
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 223.2
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 222.4
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 222.4
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 220.5
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 219.6
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 218.3
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 218.1
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 216.1
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 214.7
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 214.0
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 213.4
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 212.7
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 208.2
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 207.2
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 206.5
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 205.8
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 205.8
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 203.1
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 203.1
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 200.8
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 200.5
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 199.5
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 197.5
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 197.4
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 195.5
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 193.7
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 193.1
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 192.9
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 191.6
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 191.6
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 189.9
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 187.7
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 187.6
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 185.9
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 185.1
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 180.0
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 179.4
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 179.2
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 178.2
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 174.1
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 174.0
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 169.8
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 169.5
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 169.3
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 169.1
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 168.0
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 167.9
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 167.4
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 166.1
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 165.2
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 164.7
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 161.5
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 158.0
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 157.3
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 156.6
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 151.6
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 147.2
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 144.7
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 143.7
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 139.8
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 139.7
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 136.2
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 136.0
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 135.3
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 133.2
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 132.6
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 129.5
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 127.7
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 126.9
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 126.9
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 126.4
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 124.0
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 121.8
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 121.6
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 118.7
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 118.3
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 117.4
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 116.3
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 116.0
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 115.2
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 113.6
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 113.3
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 111.7
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 107.9
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 106.5
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 104.1
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 103.8
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 102.2
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 101.9
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 98.3
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 98.1
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 97.8
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 95.2
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 94.8
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 93.4
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 87.9
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 68.4
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Brain - Putamen (basal ganglia)
Average nTPM: 212.4
Samples: 205

Max nTPM: 896.0
Min nTPM: 78.4
Std nTPM: 96.2
Median nTPM: 189.3
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 896.0
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 645.6
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 464.6
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 434.9
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 419.1
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 417.9
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 406.8
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 395.1
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 393.4
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 375.6
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 370.5
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 342.6
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 339.7
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 333.0
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 331.2
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 331.2
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 330.9
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 325.8
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 322.4
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 322.4
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 320.0
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 319.9
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 317.2
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 316.7
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 316.4
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 315.7
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 313.6
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 309.7
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 307.8
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 301.9
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 300.7
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 300.1
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 299.7
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 293.2
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 286.7
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 286.0
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 284.9
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 280.5
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 279.9
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 279.3
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 278.0
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 277.3
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 277.0
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 274.0
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 273.2
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 269.3
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 268.3
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 268.1
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 263.2
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 261.8
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 260.7
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 259.8
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 259.0
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 255.5
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 254.4
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 254.4
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 253.3
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 252.6
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 252.4
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 252.3
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 250.8
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 249.4
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 247.5
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 244.3
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 241.8
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 237.3
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 236.5
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 231.9
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 231.4
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 228.6
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 227.2
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 224.3
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 222.1
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 219.4
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 216.8
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 215.3
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 214.4
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 214.1
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 213.1
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 212.5
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 211.9
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 210.6
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 209.8
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 208.3
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 207.9
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 207.4
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 205.9
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 204.5
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 204.3
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 203.3
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 203.0
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 201.8
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 200.2
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 200.1
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 197.9
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 195.0
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 193.8
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 193.8
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 193.3
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 192.4
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 191.3
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 190.7
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 189.3
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 188.5
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 187.8
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 186.8
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 185.8
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 184.8
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 184.4
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 184.3
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 184.2
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 181.9
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 181.3
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 180.9
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 180.5
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 179.9
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 178.2
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 178.0
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 177.5
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 176.5
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 176.0
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 175.0
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 173.5
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 172.7
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 169.5
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 169.3
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 169.2
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 168.7
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 168.3
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 167.6
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 167.0
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 166.6
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 164.9
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 164.5
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 163.7
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 163.4
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 162.6
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 162.5
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 161.8
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 160.7
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 159.4
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 158.3
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 156.7
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 156.1
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 155.9
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 155.8
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 155.6
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 155.5
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 152.9
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 152.7
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 151.8
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 150.8
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 149.9
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 149.7
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 149.5
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 149.4
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 147.9
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 147.8
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 146.2
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 145.7
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 145.2
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 144.7
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 144.3
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 143.0
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 142.2
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 139.7
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 139.5
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 138.7
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 136.6
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 134.9
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 134.7
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 134.6
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 134.0
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 131.0
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 129.9
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 129.8
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 129.6
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 129.0
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 128.1
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 124.5
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 122.2
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 121.7
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 120.7
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 120.0
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 118.5
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 118.3
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 117.8
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 114.5
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 112.5
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 111.6
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 110.5
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 109.7
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 108.0
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 106.1
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 105.9
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 104.3
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 102.6
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 95.8
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 94.5
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 93.5
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 93.4
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 92.4
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 84.4
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 83.8
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 78.4
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

1550.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 555.2
FF:10164-103B2 76 years, female 555.2
Nucleus accumbens
Scaled Tags Per Million: 511.4
FF:10037-101F1 23-56 years, mixed 511.4
Putamen
Scaled Tags Per Million: 384.9
FF:10176-103C5 60 years, female 384.9
Globus pallidus
Scaled Tags Per Million: 1550.0
FF:10161-103A8 76 years, female 1801.2
FF:10175-103C4 60 years, female 1298.7

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1276.1
Pig sample Sample description nTPM
Caudate
nTPM: 1276.1
Samples: 4

Max nTPM: 1631.2
Min nTPM: 996.3
Sample A Female 996.3
Sample B Female 1253.6
Sample C Male 1631.2
Sample D Male 1223.3
Putamen
nTPM: 1248.0
Samples: 4

Max nTPM: 1896.6
Min nTPM: 881.6
Sample A Female 1896.6
Sample B Female 881.6
Sample C Male 1136.1
Sample D Male 1077.6
Septum
nTPM: 1097.5
Samples: 4

Max nTPM: 1323.6
Min nTPM: 830.2
Sample A Female 1199.4
Sample B Female 830.2
Sample C Male 1323.6
Sample D Male 1036.8
Ventral pallidum
nTPM: 931.6
Samples: 4

Max nTPM: 1012.8
Min nTPM: 728.8
Sample A Female 1012.8
Sample B Female 728.8
Sample C Male 981.1
Sample D Male 1003.5

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

691.2
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 450.7
Samples: 4

Max nTPM: 501.4
Min nTPM: 401.6
Sample A Male 477.4
Sample B Male 501.4
Sample C Female 401.6
Sample D Female 422.4
Septum
nTPM: 691.2
Samples: 4

Max nTPM: 886.5
Min nTPM: 469.3
Sample A Male 886.5
Sample B Male 469.3
Sample C Female 609.5
Sample D Female 799.5
Ventral forebrain
nTPM: 449.0
Samples: 4

Max nTPM: 691.3
Min nTPM: 311.5
Sample A Male 311.5
Sample B Male 691.3
Sample C Female 438.5
Sample D Female 354.5

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

7.9
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 4.6
73788443 Antisense, RP_051213_01_B02, Mouse strain C57BL/6J (56 days, male) 5.3
70429441 Antisense, RP_050614_01_F09, Mouse strain C57BL/6J (56 days, male) 4.6
73512200 Antisense, RP_050712_04_F12, Mouse strain C57BL/6J (56 days, male) 3.7
70918880 Antisense, RP_050712_04_F12, Mouse strain C57BL/6J (56 days, male) 1.3
Pallidum
Expression energy: 7.9
73788443 Antisense, RP_051213_01_B02, Mouse strain C57BL/6J (56 days, male) 8.8
73512200 Antisense, RP_050712_04_F12, Mouse strain C57BL/6J (56 days, male) 7.8
70429441 Antisense, RP_050614_01_F09, Mouse strain C57BL/6J (56 days, male) 7.1
70918880 Antisense, RP_050712_04_F12, Mouse strain C57BL/6J (56 days, male) 2.5

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