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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: High
Neuronal cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:688.3 nTPM
HPA Brain:502.9 nTPM
GTEx:688.3 nTPM
FANTOM5:1129.4 Scaled Tags Per Million
Pig:1422.5 nTPM
Mouse:1474.4 nTPM
Allen mouse:14.2 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA007316Antibody HPA007571Antibody CAB008636
Glial cells HighMediumHigh
Neuronal cells LowMediumMedium






BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

502.9
Sample id Sample description nTPM
Caudate nucleus
nTPM: 416.2
1857 Female, age 85, left hemisphere 612.5
1781 Male, age 74, unknown 430.8
2846 Female, age 79, unknown 419.4
1854 Male, age 80, left hemisphere 415.3
2481 Female, age 94, left hemisphere 414.3
2290 Female, age 72, unknown 404.6
2288 Male, age 75, left hemisphere 341.0
2289 Male, age 61, right hemisphere 291.6
Globus pallidus, externus
nTPM: 502.9
1996 Male, age 80, right hemisphere 694.0
2646 Male, age 61, right hemisphere 535.9
2772 Female, age 79, unknown 481.2
2567 Female, age 72, unknown 407.8
2395 Male, age 75, both hemispheres 395.7
Globus pallidus, internus
nTPM: 423.4
2037 Male, age 80, right hemisphere 587.7
1818 Male, age 74, unknown 489.1
2111 Female, age 85, right hemisphere 423.7
2483 Female, age 94, right hemisphere 404.5
2287 Male, age 75, right hemisphere 363.9
2778 Female, age 91, both hemispheres 351.5
2566 Female, age 72, unknown 343.6
Nucleus accumbens
nTPM: 425.3
1806 Female, age 85, left hemisphere 608.7
2286 Male, age 75, left hemisphere 467.9
2698 Female, age 72, unknown 423.7
1856 Female, age 91, right hemisphere 389.7
2732 Male, age 80, right hemisphere 387.0
1783 Male, age 74, unknown 380.1
2391 Female, age 94, left hemisphere 378.6
2824 Male, age 61, right hemisphere 366.8
Nucleus basalis of Meynert
nTPM: 389.0
2569 Male, age 61, both hemispheres 540.6
2393 Male, age 80, right hemisphere 462.3
2484 Female, age 94, left hemisphere 278.2
2821 Male, age 75, both hemispheres 274.9
Nucleus of the diagonal band
nTPM: 380.7
2195 Female, age 85, both hemispheres 430.7
1812 Female, age 91, both hemispheres 410.7
2775 Male, age 80, right hemisphere 408.6
1979 Male, age 74, unknown 373.3
2029 Male, age 61, right hemisphere 280.1
Putamen
nTPM: 375.9
2489 Female, age 72, unknown 459.5
2482 Female, age 94, left hemisphere 406.8
2466 Female, age 79, unknown 392.1
1838 Male, age 80, right hemisphere 379.0
1829 Male, age 74, unknown 337.3
2647 Male, age 75, left hemisphere 329.5
1937 Female, age 91, right hemisphere 327.3
Septal nuclei
nTPM: 422.9
2059 Female, age 85, both hemispheres 611.8
2394 Male, age 61, left hemisphere 482.2
1960 Male, age 74, unknown 450.5
2031 Female, age 72, unknown 412.4
2199 Male, age 80, right hemisphere 352.2
2009 Female, age 91, both hemispheres 326.6
2629 Female, age 94, right hemisphere 324.2
Stria terminalis, bed nucleus
nTPM: 292.3
1974 Female, age 91, both hemispheres 293.1
2201 Male, age 74, unknown 292.2
2486 Female, age 94, both hemispheres 291.6

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

688.3
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 582.1
Samples: 246

Max nTPM: 1647.7
Min nTPM: 139.4
Std nTPM: 249.5
Median nTPM: 521.1
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 1647.7
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 1363.3
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 1254.2
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 1219.9
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 1190.0
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 1173.4
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 1155.2
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 1117.9
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 1114.9
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 1098.7
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 1090.2
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 1085.1
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 1076.4
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 1063.3
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 1058.7
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 1049.2
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 1020.5
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 1017.3
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 1004.8
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 996.5
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 971.0
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 967.2
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 954.4
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 953.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 944.1
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 931.7
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 919.6
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 899.6
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 898.5
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 876.8
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 871.8
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 857.4
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 854.3
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 848.4
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 847.5
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 844.7
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 842.3
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 841.8
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 834.9
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 829.8
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 828.2
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 827.5
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 826.7
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 824.2
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 820.4
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 805.3
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 801.7
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 800.4
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 800.2
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 790.9
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 784.9
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 779.1
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 774.6
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 773.0
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 771.8
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 765.2
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 758.4
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 745.0
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 741.9
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 734.5
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 723.7
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 720.4
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 710.4
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 710.1
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 705.6
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 703.7
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 703.6
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 703.4
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 692.9
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 680.7
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 680.6
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 680.5
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 678.9
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 675.6
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 672.4
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 668.1
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 658.9
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 656.9
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 649.7
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 647.3
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 645.5
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 645.2
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 644.5
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 644.2
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 643.4
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 642.6
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 638.4
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 632.8
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 631.1
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 627.2
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 625.7
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 622.5
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 621.2
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 621.1
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 619.4
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 607.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 602.6
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 598.1
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 586.5
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 584.8
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 577.4
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 575.6
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 573.9
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 573.5
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 570.5
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 570.3
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 569.3
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 567.9
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 565.7
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 562.5
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 552.0
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 551.4
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 551.0
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 550.7
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 547.8
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 545.6
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 545.6
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 538.6
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 536.4
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 533.6
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 529.0
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 527.6
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 523.5
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 518.7
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 516.8
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 516.5
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 514.6
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 514.1
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 511.8
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 511.4
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 509.3
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 508.4
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 506.6
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 505.9
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 505.1
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 504.9
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 502.0
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 499.0
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 498.7
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 495.2
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 494.0
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 493.4
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 492.6
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 492.5
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 491.8
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 491.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 491.0
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 488.5
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 484.4
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 483.6
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 481.1
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 474.5
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 472.3
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 469.8
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 469.3
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 466.8
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 461.6
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 458.9
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 453.3
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 450.8
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 447.8
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 446.0
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 435.6
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 435.6
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 432.6
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 429.5
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 427.7
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 427.1
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 425.0
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 421.8
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 417.7
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 416.3
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 415.6
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 415.0
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 414.2
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 410.9
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 409.8
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 407.9
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 406.6
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 406.1
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 403.0
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 402.1
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 396.7
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 394.9
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 393.8
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 389.6
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 387.3
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 385.7
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 384.2
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 379.8
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 378.9
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 376.9
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 375.8
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 375.1
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 374.2
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 373.7
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 371.2
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 370.9
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 370.2
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 368.9
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 360.8
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 358.8
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 358.1
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 355.8
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 352.5
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 348.4
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 347.6
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 345.5
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 342.4
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 342.3
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 338.3
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 337.9
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 333.9
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 333.3
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 332.1
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 330.9
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 330.4
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 330.0
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 325.9
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 324.5
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 322.9
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 319.8
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 319.1
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 316.8
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 316.7
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 316.4
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 315.2
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 315.0
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 313.3
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 303.3
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 296.8
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 294.2
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 291.8
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 278.9
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 276.8
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 273.6
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 248.9
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 241.8
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 210.7
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 206.4
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 205.7
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 190.8
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 158.8
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 148.5
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 144.1
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 139.4
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 666.8
Samples: 246

Max nTPM: 2907.6
Min nTPM: 213.9
Std nTPM: 357.5
Median nTPM: 566.9
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 2907.6
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 2152.1
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 2037.8
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 1754.7
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 1675.8
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 1530.7
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 1510.1
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 1441.8
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 1428.2
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 1402.0
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 1381.4
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 1368.3
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 1365.7
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 1325.3
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 1257.8
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 1257.5
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 1255.8
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 1241.8
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 1239.1
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 1238.2
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 1230.8
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 1226.1
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 1195.5
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 1192.7
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 1175.3
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 1172.0
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 1154.3
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 1129.8
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 1101.3
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 1074.0
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 1051.4
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 1050.9
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 1043.1
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 1027.2
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 1025.7
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 1021.5
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 1018.0
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 1015.1
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 1013.9
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 973.3
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 965.1
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 956.8
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 951.1
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 944.7
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 919.5
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 919.5
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 914.5
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 903.0
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 887.3
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 876.0
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 847.0
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 842.1
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 840.5
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 824.6
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 818.8
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 815.2
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 802.7
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 785.8
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 783.1
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 782.6
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 773.8
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 771.2
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 764.2
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 763.3
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 759.5
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 750.1
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 747.8
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 733.7
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 727.9
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 727.2
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 721.5
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 720.7
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 707.0
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 706.1
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 706.0
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 704.2
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 704.1
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 702.9
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 701.8
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 699.0
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 695.4
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 693.8
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 688.4
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 688.3
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 682.3
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 679.8
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 675.6
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 675.6
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 671.6
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 668.5
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 667.9
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 666.3
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 663.5
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 661.4
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 652.6
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 651.7
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 647.4
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 638.4
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 637.8
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 634.3
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 632.8
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 627.7
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 625.2
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 622.0
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 618.9
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 616.9
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 614.7
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 610.4
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 602.9
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 602.0
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 599.2
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 599.1
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 593.0
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 592.3
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 590.3
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 587.1
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 583.2
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 582.5
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 582.1
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 576.6
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 574.1
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 569.1
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 568.4
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 565.3
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 563.7
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 562.6
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 559.2
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 558.8
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 558.3
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 557.8
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 553.3
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 551.0
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 548.4
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 544.6
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 535.3
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 534.5
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 533.8
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 530.6
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 528.1
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 525.2
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 524.9
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 524.2
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 522.7
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 518.5
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 515.6
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 511.5
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 508.9
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 503.6
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 502.2
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 501.1
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 500.5
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 496.1
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 494.8
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 493.8
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 491.7
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 486.5
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 486.4
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 484.5
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 483.0
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 480.3
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 478.0
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 475.7
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 474.3
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 472.2
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 470.3
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 469.2
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 468.5
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 464.4
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 463.0
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 458.8
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 456.6
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 454.3
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 453.1
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 452.5
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 452.3
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 450.3
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 449.9
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 449.9
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 449.5
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 446.9
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 443.6
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 439.6
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 435.2
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 434.9
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 434.7
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 434.6
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 433.7
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 430.0
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 427.9
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 427.0
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 426.8
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 420.4
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 419.6
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 417.2
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 416.8
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 413.7
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 408.1
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 408.1
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 407.0
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 400.3
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 400.0
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 399.6
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 399.0
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 395.2
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 394.5
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 392.8
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 390.5
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 386.2
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 384.3
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 382.3
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 376.2
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 374.9
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 373.2
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 369.8
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 365.4
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 364.3
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 363.8
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 359.5
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 352.3
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 349.7
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 346.6
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 343.4
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 342.6
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 338.4
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 332.7
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 329.9
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 319.5
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 313.9
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 313.9
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 310.6
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 310.0
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 303.4
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 297.9
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 289.1
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 288.6
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 285.2
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 284.3
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 282.8
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 279.6
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 276.4
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 273.8
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 273.1
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 252.6
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 249.6
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 236.0
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 213.9
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Brain - Putamen (basal ganglia)
Average nTPM: 688.3
Samples: 205

Max nTPM: 2010.3
Min nTPM: 195.3
Std nTPM: 301.9
Median nTPM: 627.3
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 2010.3
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 1944.8
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 1604.7
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 1526.3
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 1437.5
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 1376.6
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 1362.2
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 1339.4
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 1306.2
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 1293.9
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 1287.7
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 1277.7
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 1266.4
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 1251.3
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 1178.9
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 1155.0
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 1138.8
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 1124.4
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 1106.8
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 1085.0
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 1042.8
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 1037.1
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 1028.7
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 1027.6
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 1019.6
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 1018.0
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 1013.1
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 1005.6
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 1002.2
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 981.9
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 979.6
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 967.9
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 966.2
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 958.5
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 958.1
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 957.1
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 949.7
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 934.3
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 933.2
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 929.0
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 927.4
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 919.9
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 902.7
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 884.5
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 884.2
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 876.4
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 861.3
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 849.8
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 849.6
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 848.7
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 848.5
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 827.7
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 812.7
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 811.3
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 808.2
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 806.6
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 800.8
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 799.9
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 794.5
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 787.7
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 784.7
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 782.0
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 780.5
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 773.3
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 772.8
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 771.0
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 766.3
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 760.2
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 755.8
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 738.8
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 729.8
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 729.0
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 728.9
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 723.3
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 721.3
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 715.5
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 698.6
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 697.6
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 696.8
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 692.6
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 691.4
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 690.6
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 690.5
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 685.9
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 682.1
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 662.6
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 662.1
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 662.0
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 662.0
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 660.6
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 660.3
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 660.2
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 659.1
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 657.8
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 655.9
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 653.8
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 650.9
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 649.7
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 647.4
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 642.5
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 634.9
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 627.9
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 627.3
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 623.8
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 622.0
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 612.8
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 610.2
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 610.2
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 607.2
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 603.9
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 601.6
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 601.4
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 601.1
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 597.3
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 597.3
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 596.3
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 589.7
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 584.8
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 582.6
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 581.7
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 580.5
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 579.3
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 572.1
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 568.1
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 566.3
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 556.6
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 556.0
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 550.6
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 545.8
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 543.7
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 535.8
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 534.7
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 531.1
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 530.4
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 528.0
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 527.2
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 526.8
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 524.1
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 522.1
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 520.4
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 506.9
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 505.2
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 504.9
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 504.8
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 503.5
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 487.8
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 487.3
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 485.4
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 484.6
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 484.3
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 483.5
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 483.2
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 481.1
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 477.5
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 476.0
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 473.8
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 473.7
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 471.1
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 470.8
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 466.6
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 462.1
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 456.7
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 453.8
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 446.5
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 441.7
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 441.5
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 436.7
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 433.6
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 433.3
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 430.6
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 429.4
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 422.9
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 416.5
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 415.3
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 413.2
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 412.3
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 408.4
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 408.0
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 407.2
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 401.6
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 399.6
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 399.2
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 397.6
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 397.4
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 392.5
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 366.7
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 357.9
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 354.6
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 352.8
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 352.1
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 342.8
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 340.7
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 336.0
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 333.5
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 311.1
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 305.4
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 296.7
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 295.0
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 284.3
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 269.5
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 257.8
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 246.1
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 227.6
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 200.1
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 195.3
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

1129.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 1129.4
FF:10164-103B2 76 years, female 1129.4
Nucleus accumbens
Scaled Tags Per Million: 720.3
FF:10037-101F1 23-56 years, mixed 720.3
Putamen
Scaled Tags Per Million: 983.2
FF:10176-103C5 60 years, female 983.2
Globus pallidus
Scaled Tags Per Million: 654.2
FF:10161-103A8 76 years, female 790.6
FF:10175-103C4 60 years, female 517.9

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1422.5
Pig sample Sample description nTPM
Caudate
nTPM: 638.5
Samples: 4

Max nTPM: 838.3
Min nTPM: 452.7
Sample A Female 452.7
Sample B Female 622.8
Sample C Male 838.3
Sample D Male 640.1
Putamen
nTPM: 1422.5
Samples: 4

Max nTPM: 1793.1
Min nTPM: 956.8
Sample A Female 1793.1
Sample B Female 956.8
Sample C Male 1603.8
Sample D Male 1336.3
Septum
nTPM: 743.8
Samples: 4

Max nTPM: 890.3
Min nTPM: 585.8
Sample A Female 689.8
Sample B Female 809.1
Sample C Male 585.8
Sample D Male 890.3
Ventral pallidum
nTPM: 1088.8
Samples: 4

Max nTPM: 1452.6
Min nTPM: 610.4
Sample A Female 610.4
Sample B Female 1269.8
Sample C Male 1452.6
Sample D Male 1022.3

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1474.4
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 1310.3
Samples: 4

Max nTPM: 1478.9
Min nTPM: 1110.4
Sample A Male 1110.4
Sample B Male 1188.8
Sample C Female 1478.9
Sample D Female 1463.1
Septum
nTPM: 1474.4
Samples: 4

Max nTPM: 1685.0
Min nTPM: 1118.6
Sample A Male 1118.6
Sample B Male 1685.0
Sample C Female 1630.0
Sample D Female 1464.1
Ventral forebrain
nTPM: 1381.4
Samples: 4

Max nTPM: 1637.4
Min nTPM: 1228.0
Sample A Male 1228.0
Sample B Male 1239.4
Sample C Female 1637.4
Sample D Female 1420.9

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

14.2
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 12.5
67978757 Antisense, RP_040923_01_G08, Mouse strain C57BL/6J (56 days, male) 16.0
74047918 Antisense, RP_051214_02_D03, Mouse strain C57BL/6J (56 days, male) 13.6
74988768 Antisense, RP_060315_05_H12, Mouse strain C57BL/6J (56 days, male) 11.2
70919872 Antisense, RP_050713_02_C01, Mouse strain C57BL/6J (56 days, male) 9.2
Pallidum
Expression energy: 14.2
67978757 Antisense, RP_040923_01_G08, Mouse strain C57BL/6J (56 days, male) 17.9
74047918 Antisense, RP_051214_02_D03, Mouse strain C57BL/6J (56 days, male) 15.7
74988768 Antisense, RP_060315_05_H12, Mouse strain C57BL/6J (56 days, male) 12.8
70919872 Antisense, RP_050713_02_C01, Mouse strain C57BL/6J (56 days, male) 10.3

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