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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
532.0
nTPM
FANTOM5:
714.3
Scaled Tags Per Million
Pig:
1326.5
nTPM
Allen mouse:
15.8
Expression energy
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
532.0
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 307.4
2090
Male, age 80, both hemispheres
338.2
1984
Male, age 76, both hemispheres
322.4
2188
Female, age 91, both hemispheres
317.3
2301
Female, age 85, both hemispheres
252.0
Dorsal cochlear nucleus nTPM: 416.0
2058
Male, age 76, both hemispheres
542.8
2802
Male, age 74, right hemisphere
445.8
2378
Male, age 80, both hemispheres
405.0
2370
Male, age 61, both hemispheres
372.8
2187
Female, age 91, both hemispheres
313.6
Dorsal tegmental nucleus nTPM: 532.0
2358
Male, age 61, both hemispheres
967.4
1936
Male, age 76, left hemisphere
424.5
2083
Male, age 80, both hemispheres
421.8
2326
Male, age 74, both hemispheres
314.3
Dorsolateral tegmental area nTPM: 432.4
2337
Male, age 61, both hemispheres
695.6
2751
Female, age 85, both hemispheres
433.2
2654
Male, age 80, both hemispheres
424.2
2141
Male, age 76, both hemispheres
336.1
2360
Male, age 74, both hemispheres
273.1
Kolliker-Fuse nucleus nTPM: 441.3
2315
Male, age 76, right hemisphere
568.1
2163
Male, age 80, both hemispheres
401.3
2793
Female, age 91, left hemisphere
354.6
Lateral lemniscal nuclei nTPM: 318.9
2453
Male, age 74, right hemisphere
373.2
2036
Male, age 80, both hemispheres
338.4
2320
Female, age 91, left hemisphere
300.5
2746
Female, age 85, left hemisphere
295.9
2169
Male, age 76, both hemispheres
286.6
Lateral parabrachial nucleus nTPM: 429.7
2792
Male, age 76, both hemispheres
703.2
2790
Male, age 61, both hemispheres
372.3
2013
Male, age 80, both hemispheres
356.1
2139
Female, age 85, right hemisphere
287.0
Lateral vestibular nucleus nTPM: 318.8
2184
Male, age 76, both hemispheres
333.1
2311
Male, age 80, both hemispheres
304.6
Locus coeruleus nTPM: 308.5
1980
Male, age 76, both hemispheres
409.3
2317
Female, age 72, unknown
334.7
2162
Male, age 80, both hemispheres
303.0
2788
Male, age 74, unknown
292.0
2123
Female, age 91, both hemispheres
286.6
2720
Male, age 74, both hemispheres
270.3
2014
Male, age 55, unknown
263.8
Medial parabrachial nucleus nTPM: 360.0
2156
Male, age 61, both hemispheres
428.9
2786
Male, age 76, both hemispheres
386.8
2463
Female, age 85, right hemisphere
361.6
2854
Male, age 80, both hemispheres
350.1
2170
Female, age 91, both hemispheres
272.3
Medial periolivary nuclei nTPM: 342.1
2081
Male, age 80, both hemispheres
388.9
2791
Male, age 74, right hemisphere
361.4
2458
Female, age 91, both hemispheres
347.7
2063
Male, age 76, both hemispheres
344.5
2171
Female, age 85, both hemispheres
268.0
Motor facial nucleus nTPM: 371.5
2795
Female, age 91, both hemispheres
622.6
2126
Male, age 61, both hemispheres
370.1
2365
Male, age 74, right hemisphere
355.9
2062
Male, age 76, both hemispheres
332.8
2327
Male, age 80, both hemispheres
281.1
2697
Female, age 85, both hemispheres
266.4
Motor trigeminal nucleus nTPM: 319.7
2309
Male, age 76, both hemispheres
365.6
2335
Male, age 61, both hemispheres
343.8
2560
Male, age 74, both hemispheres
333.6
2079
Male, age 80, both hemispheres
326.8
2321
Female, age 91, both hemispheres
228.9
Nuclei of the trapezoid body nTPM: 333.3
2368
Female, age 91, both hemispheres
466.1
1983
Male, age 76, both hemispheres
351.7
2166
Male, age 80, both hemispheres
326.6
2735
Female, age 85, both hemispheres
286.8
2159
Male, age 61, both hemispheres
235.1
Nucleus raphe magnus nTPM: 291.7
2459
Female, age 91, both hemispheres
359.1
2051
Male, age 76, both hemispheres
349.0
2328
Male, age 80, both hemispheres
323.4
2455
Male, age 74, both hemispheres
318.8
2172
Female, age 85, both hemispheres
213.4
2160
Male, age 61, both hemispheres
186.6
Paramedian reticular nucleus nTPM: 377.1
2052
Male, age 76, both hemispheres
529.0
2057
Male, age 80, both hemispheres
392.9
2050
Female, age 85, both hemispheres
300.7
2313
Male, age 61, both hemispheres
285.8
Pedunculopontine tegmental nucleus nTPM: 468.6
2338
Male, age 61, both hemispheres
564.4
1921
Female, age 85, both hemispheres
421.2
2334
Male, age 80, both hemispheres
420.2
Pontine nuclei nTPM: 300.9
1863
Male, age 55, unknown
343.8
2115
Male, age 80, left hemisphere
342.4
2454
Male, age 74, left hemisphere
339.8
1968
Male, age 76, left hemisphere
310.2
2319
Female, age 91, both hemispheres
310.0
2109
Female, age 72, unknown
264.5
2727
Male, age 61, right hemisphere
248.6
2787
Female, age 85, both hemispheres
247.7
Pontine raphe nucleus nTPM: 356.7
2853
Male, age 76, midline
400.7
2122
Female, age 85, midline
312.7
Posteroventral cochlear nucleus nTPM: 389.2
2070
Male, age 76, both hemispheres
473.5
2371
Male, age 61, both hemispheres
418.4
2341
Male, age 80, both hemispheres
408.6
2752
Female, age 85, both hemispheres
333.4
2135
Female, age 91, both hemispheres
312.4
Principal sensory trigeminal nucleus nTPM: 294.6
2324
Male, age 76, both hemispheres
369.3
2367
Female, age 91, left hemisphere
302.3
2008
Male, age 80, left hemisphere
293.0
2158
Male, age 61, both hemispheres
213.6
Reticular pontine nucleus, caudal nTPM: 353.2
2457
Female, age 91, both hemispheres
410.9
2092
Male, age 76, both hemispheres
399.5
2332
Male, age 80, right hemisphere
302.9
2559
Male, age 74, both hemispheres
299.5
Reticular pontine nucleus, oral nTPM: 353.1
1939
Male, age 80, both hemispheres
427.3
2167
Male, age 76, both hemispheres
365.6
2012
Female, age 85, both hemispheres
334.8
2361
Male, age 74, both hemispheres
328.3
2366
Female, age 91, both hemispheres
309.4
Reticulotegmental nucleus nTPM: 334.5
2333
Male, age 80, both hemispheres
368.6
2322
Female, age 91, both hemispheres
358.9
2452
Male, age 74, both hemispheres
310.6
2325
Male, age 76, both hemispheres
300.0
Spinal trigeminal nucleus, oral nTPM: 364.6
1978
Male, age 76, both hemispheres
433.8
2737
Female, age 85, both hemispheres
353.8
2164
Male, age 80, both hemispheres
306.3
Subcoeruleus area nTPM: 363.9
2369
Female, age 85, left hemisphere
478.4
1958
Male, age 80, both hemispheres
356.2
2451
Male, age 74, both hemispheres
348.9
2323
Female, age 91, left hemisphere
330.7
2089
Male, age 76, left hemisphere
305.2
Superior olive nTPM: 336.5
2020
Male, age 76, both hemispheres
398.8
2364
Male, age 74, right hemisphere
335.8
2561
Female, age 91, both hemispheres
329.0
2329
Male, age 80, right hemisphere
318.2
1875
Female, age 85, both hemispheres
300.7
Ventral periolivary nuclei nTPM: 334.6
2023
Male, age 76, both hemispheres
449.5
2165
Male, age 80, both hemispheres
331.6
2794
Female, age 91, left hemisphere
289.3
2130
Female, age 85, both hemispheres
268.0
Ventrolateral tegmental area, A5 NE cell group nTPM: 408.1
2359
Male, age 61, both hemispheres
550.7
2456
Female, age 91, both hemispheres
454.7
1959
Male, age 76, both hemispheres
385.9
2161
Male, age 80, both hemispheres
372.9
2840
Female, age 85, both hemispheres
348.9
2449
Male, age 74, both hemispheres
335.5
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
1326.5
Pig sample
Sample description
nTPM
Pons nTPM: 1326.5
Samples: 4
Max nTPM: 1937.0
Min nTPM: 984.0
Sample A
Female
1219.7
Sample B
Female
984.0
Sample C
Male
1165.3
Sample D
Male
1937.0
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.
The Human Protein Atlas project is funded
