HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: Low
RNA expressioni
Consensus:428.4 nTPM
HPA Brain:353.5 nTPM
GTEx:428.4 nTPM
FANTOM5:687.5 Scaled Tags Per Million
Pig:903.3 nTPM
Mouse:1351.7 nTPM
Allen mouse:13.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA007316Antibody HPA007571Antibody CAB008636
Glial cells HighMediumHigh
Neuronal cells Not detectedMediumMedium







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 353.5
Sample id Sample description nTPM
Hippocampus
nTPM: 296.2
2529 Female, age 94, left hemisphere 365.9
2621 Female, age 67, right hemisphere 305.3
1911 Female, age 85, right hemisphere 300.1
1855 Male, age 76, left hemisphere 291.5
1898 Male, age 80, left hemisphere 278.4
2148 Female, age 91, left hemisphere 236.1
Dentate gyrus
nTPM: 255.3
2010 Male, age 76, both hemispheres 334.5
2246 Female, age 85, both hemispheres 315.9
1927 Female, age 91, both hemispheres 235.0
2528 Male, age 74, both hemispheres 234.4
2530 Female, age 94, left hemisphere 227.5
2531 Female, age 67, both hemispheres 184.5
Entorhinal gyrus
nTPM: 334.3
2117 Female, age 91, right hemisphere 469.1
1938 Female, age 85, left hemisphere 439.9
2686 Male, age 75, right hemisphere 384.7
1787 Male, age 76, left hemisphere 268.7
2764 Male, age 80, right hemisphere 266.4
2613 Female, age 94, left hemisphere 177.2
Hippocampus, CA1
nTPM: 253.4
2527 Male, age 74, both hemispheres 341.5
1873 Female, age 85, both hemispheres 250.3
2082 Female, age 91, right hemisphere 240.3
2749 Male, age 80, left hemisphere 230.2
2045 Male, age 76, both hemispheres 204.8
Hippocampus, CA2
nTPM: 266.0
1940 Female, age 85, left hemisphere 306.4
2113 Female, age 91, right hemisphere 284.7
2249 Male, age 74, both hemispheres 284.7
2437 Female, age 94, left hemisphere 275.5
1963 Male, age 80, left hemisphere 250.8
1892 Male, age 76, both hemispheres 194.1
Hippocampus, CA3
nTPM: 248.1
1891 Female, age 85, both hemispheres 322.8
2436 Male, age 74, both hemispheres 305.1
1867 Male, age 76, both hemispheres 288.3
2861 Female, age 67, both hemispheres 228.2
2137 Male, age 80, left hemisphere 209.3
2620 Female, age 94, left hemisphere 134.8
Parahippocampal cortex
nTPM: 353.5
1933 Female, age 85, both hemispheres 512.2
2692 Male, age 74, both hemispheres 471.4
2622 Female, age 67, right hemisphere 372.3
2693 Female, age 94, both hemispheres 362.3
2250 Female, age 67, right hemisphere 350.8
2532 Female, age 72, left hemisphere 333.3
1990 Female, age 91, right hemisphere 298.8
2245 Female, age 91, both hemispheres 293.3
1850 Male, age 80, both hemispheres 275.7
2018 Male, age 76, both hemispheres 264.6
Perirhinal gyrus
nTPM: 316.6
1841 Female, age 85, right hemisphere 426.7
1794 Male, age 80, right hemisphere 316.6
1847 Female, age 91, left hemisphere 297.6
2521 Female, age 94, right hemisphere 294.7
2848 Male, age 76, right hemisphere 247.3
Subiculum
nTPM: 337.5
2042 Male, age 76, both hemispheres 388.6
2619 Male, age 74, both hemispheres 369.6
1977 Female, age 85, both hemispheres 327.8
2729 Female, age 91, right hemisphere 325.6
2438 Female, age 94, left hemisphere 308.7
1901 Male, age 80, both hemispheres 304.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 428.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 428.4
Samples: 197

Max nTPM: 1300.3
Min nTPM: 116.4
Std nTPM: 195.7
Median nTPM: 382.8
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 1300.3
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 1106.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 1039.5
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 1015.0
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 967.2
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 960.3
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 937.6
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 917.4
GTEX-1GN73-0011-R1a-SM-CKZNT 60-69 years, male 901.8
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 853.5
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 844.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 687.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 687.5
FF:10153-102I9 76 years, female 1000.1
FF:10169-103B7 60 years, female 374.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 903.3
Pig sample Sample description nTPM
Subiculum
nTPM: 587.4
Samples: 4

Max nTPM: 675.2
Min nTPM: 493.7
Sample A Female 675.2
Sample B Female 551.0
Sample C Male 493.7
Sample D Male 629.8
Dorsal hippocampus
nTPM: 746.2
Samples: 4

Max nTPM: 1026.9
Min nTPM: 495.5
Sample A Female 1026.9
Sample B Female 573.6
Sample C Male 888.9
Sample D Male 495.5
Entorhinal cortex
nTPM: 903.3
Samples: 4

Max nTPM: 1255.7
Min nTPM: 751.5
Sample A Female 751.5
Sample B Female 1255.7
Sample C Male 852.6
Sample D Male 753.3
Ventral hippocampus
nTPM: 589.4
Samples: 4

Max nTPM: 742.7
Min nTPM: 403.5
Sample A Female 533.8
Sample B Female 403.5
Sample C Male 677.6
Sample D Male 742.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 1351.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 1351.7
Samples: 4

Max nTPM: 1504.8
Min nTPM: 1225.0
Sample A Male 1359.1
Sample B Male 1225.0
Sample C Female 1504.8
Sample D Female 1317.9
Hippocampal formation
nTPM: 1231.8
Samples: 4

Max nTPM: 1298.1
Min nTPM: 1080.1
Sample A Male 1282.6
Sample B Male 1080.1
Sample C Female 1266.2
Sample D Female 1298.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 13.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 13.2
67978757 Antisense, RP_040923_01_G08, Mouse strain C57BL/6J (56 days, male) 18.8
74047918 Antisense, RP_051214_02_D03, Mouse strain C57BL/6J (56 days, male) 14.1
74988768 Antisense, RP_060315_05_H12, Mouse strain C57BL/6J (56 days, male) 10.3
70919872 Antisense, RP_050713_02_C01, Mouse strain C57BL/6J (56 days, male) 9.5

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