PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:829.2 nTPM
FANTOM5:714.3 Scaled Tags Per Million
Pig:1698.8 nTPM
Mouse:1399.5 nTPM
Allen mouse:16.5 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 829.2
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 307.4
2090 Male, age 80, both hemispheres 338.2
1984 Male, age 76, both hemispheres 322.4
2188 Female, age 91, both hemispheres 317.3
2301 Female, age 85, both hemispheres 252.0
Area postrema
nTPM: 829.2
2799 Male, age 61, both hemispheres 1412.9
2054 Male, age 76, both hemispheres 631.8
2306 Male, age 80, both hemispheres 443.0
Dorsal cochlear nucleus
nTPM: 416.0
2058 Male, age 76, both hemispheres 542.8
2802 Male, age 74, right hemisphere 445.8
2378 Male, age 80, both hemispheres 405.0
2370 Male, age 61, both hemispheres 372.8
2187 Female, age 91, both hemispheres 313.6
Dorsal medullary reticular nucleus
nTPM: 402.7
2088 Male, age 76, both hemispheres 475.8
2373 Male, age 61, both hemispheres 388.8
2040 Female, age 85, both hemispheres 343.4
Dorsal motor vagal complex
nTPM: 416.9
2797 Male, age 61, both hemispheres 585.9
2185 Male, age 76, both hemispheres 537.9
2844 Male, age 55, unknown 506.4
2643 Male, age 74, both hemispheres 402.1
2133 Female, age 91, both hemispheres 400.5
2813 Female, age 72, unknown 349.2
2000 Male, age 74, unknown 318.3
2807 Female, age 85, both hemispheres 235.1
Dorsal tegmental nucleus
nTPM: 532.0
2358 Male, age 61, both hemispheres 967.4
1936 Male, age 76, left hemisphere 424.5
2083 Male, age 80, both hemispheres 421.8
2326 Male, age 74, both hemispheres 314.3
Dorsolateral tegmental area
nTPM: 432.4
2337 Male, age 61, both hemispheres 695.6
2751 Female, age 85, both hemispheres 433.2
2654 Male, age 80, both hemispheres 424.2
2141 Male, age 76, both hemispheres 336.1
2360 Male, age 74, both hemispheres 273.1
Gigantocellular reticular nuclei, medullary
nTPM: 394.2
2387 Female, age 91, both hemispheres 494.5
2314 Male, age 61, both hemispheres 455.2
2022 Male, age 76, right hemisphere 426.7
1876 Female, age 85, both hemispheres 388.0
2310 Male, age 80, both hemispheres 305.6
2462 Male, age 74, both hemispheres 295.2
Gigantocellular reticular nuclei, pars
nTPM: 305.3
2706 Male, age 80, both hemispheres 349.5
2330 Male, age 80, both hemispheres 323.4
2084 Female, age 85, both hemispheres 304.0
2336 Male, age 61, both hemispheres 295.7
2168 Male, age 76, both hemispheres 254.1
Inferior olive
nTPM: 419.3
2178 Male, age 61, both hemispheres 511.4
2379 Male, age 80, both hemispheres 492.1
2085 Female, age 85, both hemispheres 390.7
2563 Male, age 74, both hemispheres 373.4
2628 Female, age 91, both hemispheres 329.0
Kolliker-Fuse nucleus
nTPM: 441.3
2315 Male, age 76, right hemisphere 568.1
2163 Male, age 80, both hemispheres 401.3
2793 Female, age 91, left hemisphere 354.6
Lateral lemniscal nuclei
nTPM: 318.9
2453 Male, age 74, right hemisphere 373.2
2036 Male, age 80, both hemispheres 338.4
2320 Female, age 91, left hemisphere 300.5
2746 Female, age 85, left hemisphere 295.9
2169 Male, age 76, both hemispheres 286.6
Lateral medullary reticular nucleus
nTPM: 416.8
2044 Male, age 76, both hemispheres 520.6
2374 Male, age 61, both hemispheres 463.6
2804 Female, age 91, both hemispheres 457.5
2852 Male, age 80, both hemispheres 454.5
2190 Female, age 85, both hemispheres 310.3
2305 Male, age 74, both hemispheres 294.6
Lateral parabrachial nucleus
nTPM: 429.7
2792 Male, age 76, both hemispheres 703.2
2790 Male, age 61, both hemispheres 372.3
2013 Male, age 80, both hemispheres 356.1
2139 Female, age 85, right hemisphere 287.0
Lateral vestibular nucleus
nTPM: 318.8
2184 Male, age 76, both hemispheres 333.1
2311 Male, age 80, both hemispheres 304.6
Locus coeruleus
nTPM: 308.5
1980 Male, age 76, both hemispheres 409.3
2317 Female, age 72, unknown 334.7
2162 Male, age 80, both hemispheres 303.0
2788 Male, age 74, unknown 292.0
2123 Female, age 91, both hemispheres 286.6
2720 Male, age 74, both hemispheres 270.3
2014 Male, age 55, unknown 263.8
Medial olivary nucleus
nTPM: 549.4
1962 Male, age 76, both hemispheres 701.6
1943 Male, age 61, both hemispheres 661.6
2851 Male, age 80, both hemispheres 446.3
2138 Female, age 91, both hemispheres 388.0
Medial parabrachial nucleus
nTPM: 360.0
2156 Male, age 61, both hemispheres 428.9
2786 Male, age 76, both hemispheres 386.8
2463 Female, age 85, right hemisphere 361.6
2854 Male, age 80, both hemispheres 350.1
2170 Female, age 91, both hemispheres 272.3
Medial periolivary nuclei
nTPM: 342.1
2081 Male, age 80, both hemispheres 388.9
2791 Male, age 74, right hemisphere 361.4
2458 Female, age 91, both hemispheres 347.7
2063 Male, age 76, both hemispheres 344.5
2171 Female, age 85, both hemispheres 268.0
Medial vestibular nucleus
nTPM: 362.6
2134 Male, age 76, both hemispheres 520.7
2624 Male, age 61, both hemispheres 377.9
2803 Female, age 91, both hemispheres 366.6
2093 Male, age 80, both hemispheres 366.4
2801 Male, age 74, both hemispheres 303.5
2743 Female, age 85, both hemispheres 240.8
Motor facial nucleus
nTPM: 371.5
2795 Female, age 91, both hemispheres 622.6
2126 Male, age 61, both hemispheres 370.1
2365 Male, age 74, right hemisphere 355.9
2062 Male, age 76, both hemispheres 332.8
2327 Male, age 80, both hemispheres 281.1
2697 Female, age 85, both hemispheres 266.4
Motor hypoglossal nucleus
nTPM: 413.1
2277 Male, age 76, both hemispheres 674.3
2125 Female, age 91, both hemispheres 385.6
2461 Male, age 61, both hemispheres 364.2
2182 Male, age 80, both hemispheres 320.8
2132 Female, age 85, both hemispheres 320.6
Motor trigeminal nucleus
nTPM: 319.7
2309 Male, age 76, both hemispheres 365.6
2335 Male, age 61, both hemispheres 343.8
2560 Male, age 74, both hemispheres 333.6
2079 Male, age 80, both hemispheres 326.8
2321 Female, age 91, both hemispheres 228.9
Nuclei of the trapezoid body
nTPM: 333.3
2368 Female, age 91, both hemispheres 466.1
1983 Male, age 76, both hemispheres 351.7
2166 Male, age 80, both hemispheres 326.6
2735 Female, age 85, both hemispheres 286.8
2159 Male, age 61, both hemispheres 235.1
Nucleus ambiguus
nTPM: 522.0
2071 Male, age 76, both hemispheres 810.8
2096 Female, age 85, both hemispheres 233.3
Nucleus cuneatus
nTPM: 460.9
2805 Female, age 91, both hemispheres 691.6
2380 Male, age 80, both hemispheres 486.7
2564 Male, age 74, both hemispheres 482.4
2376 Male, age 61, both hemispheres 454.9
2562 Male, age 61, both hemispheres 450.8
2100 Male, age 76, both hemispheres 447.6
2381 Male, age 80, both hemispheres 443.3
2131 Male, age 76, both hemispheres 361.8
2808 Female, age 85, both hemispheres 329.1
Nucleus gracilis
nTPM: 408.2
2382 Male, age 80, both hemispheres 426.6
2299 Female, age 85, both hemispheres 416.2
2627 Male, age 74, both hemispheres 381.8
Nucleus raphe magnus
nTPM: 291.7
2459 Female, age 91, both hemispheres 359.1
2051 Male, age 76, both hemispheres 349.0
2328 Male, age 80, both hemispheres 323.4
2455 Male, age 74, both hemispheres 318.8
2172 Female, age 85, both hemispheres 213.4
2160 Male, age 61, both hemispheres 186.6
Nucleus raphe obscurus
nTPM: 580.8
2142 Male, age 76, midline 948.0
2800 Male, age 61, midline 474.8
2845 Female, age 85, midline 319.8
Nucleus raphe pallidus
nTPM: 709.3
1924 Male, age 61, midline 1024.5
2145 Male, age 76, midline 733.6
2183 Male, age 80, midline 369.9
Nucleus tractus solitarii
nTPM: 364.0
2656 Male, age 76, both hemispheres 525.0
2144 Female, age 91, right hemisphere 458.9
2307 Male, age 80, both hemispheres 247.9
2191 Female, age 85, both hemispheres 224.2
Paramedian reticular nucleus
nTPM: 377.1
2052 Male, age 76, both hemispheres 529.0
2057 Male, age 80, both hemispheres 392.9
2050 Female, age 85, both hemispheres 300.7
2313 Male, age 61, both hemispheres 285.8
Parvicellular reticular nuclei
nTPM: 370.1
2119 Male, age 80, both hemispheres 420.4
2095 Male, age 76, both hemispheres 371.9
2558 Male, age 74, both hemispheres 317.9
Parvicellular reticular nuclei, medullary
nTPM: 350.3
2091 Female, age 85, both hemispheres 384.3
2181 Male, age 80, left hemisphere 360.4
2189 Female, age 91, both hemispheres 306.1
Pedunculopontine tegmental nucleus
nTPM: 468.6
2338 Male, age 61, both hemispheres 564.4
1921 Female, age 85, both hemispheres 421.2
2334 Male, age 80, both hemispheres 420.2
Peritrigeminal nucleus
nTPM: 500.1
2136 Male, age 76, both hemispheres 657.1
2179 Male, age 61, both hemispheres 499.8
2067 Female, age 85, both hemispheres 343.5
Pontine nuclei
nTPM: 300.9
1863 Male, age 55, unknown 343.8
2115 Male, age 80, left hemisphere 342.4
2454 Male, age 74, left hemisphere 339.8
1968 Male, age 76, left hemisphere 310.2
2319 Female, age 91, both hemispheres 310.0
2109 Female, age 72, unknown 264.5
2727 Male, age 61, right hemisphere 248.6
2787 Female, age 85, both hemispheres 247.7
Pontine raphe nucleus
nTPM: 356.7
2853 Male, age 76, midline 400.7
2122 Female, age 85, midline 312.7
Posteroventral cochlear nucleus
nTPM: 389.2
2070 Male, age 76, both hemispheres 473.5
2371 Male, age 61, both hemispheres 418.4
2341 Male, age 80, both hemispheres 408.6
2752 Female, age 85, both hemispheres 333.4
2135 Female, age 91, both hemispheres 312.4
Prepositus hypoglossal nucleus
nTPM: 299.4
2086 Male, age 80, both hemispheres 325.0
2855 Female, age 85, right hemisphere 273.8
Principal sensory trigeminal nucleus
nTPM: 294.6
2324 Male, age 76, both hemispheres 369.3
2367 Female, age 91, left hemisphere 302.3
2008 Male, age 80, left hemisphere 293.0
2158 Male, age 61, both hemispheres 213.6
Reticular pontine nucleus, caudal
nTPM: 353.2
2457 Female, age 91, both hemispheres 410.9
2092 Male, age 76, both hemispheres 399.5
2332 Male, age 80, right hemisphere 302.9
2559 Male, age 74, both hemispheres 299.5
Reticular pontine nucleus, oral
nTPM: 353.1
1939 Male, age 80, both hemispheres 427.3
2167 Male, age 76, both hemispheres 365.6
2012 Female, age 85, both hemispheres 334.8
2361 Male, age 74, both hemispheres 328.3
2366 Female, age 91, both hemispheres 309.4
Reticulotegmental nucleus
nTPM: 334.5
2333 Male, age 80, both hemispheres 368.6
2322 Female, age 91, both hemispheres 358.9
2452 Male, age 74, both hemispheres 310.6
2325 Male, age 76, both hemispheres 300.0
Spinal trigeminal nucleus, caudal
nTPM: 397.0
2312 Male, age 61, both hemispheres 449.2
2447 Male, age 76, both hemispheres 443.4
2308 Male, age 80, both hemispheres 386.0
2390 Female, age 91, both hemispheres 382.7
2642 Male, age 74, both hemispheres 323.9
Spinal trigeminal nucleus, interpolar
nTPM: 387.5
2066 Male, age 76, right hemisphere 460.1
2386 Female, age 85, both hemispheres 418.2
2389 Female, age 91, both hemispheres 400.9
2033 Male, age 80, both hemispheres 391.9
2625 Male, age 61, both hemispheres 266.5
Spinal trigeminal nucleus, oral
nTPM: 364.6
1978 Male, age 76, both hemispheres 433.8
2737 Female, age 85, both hemispheres 353.8
2164 Male, age 80, both hemispheres 306.3
Spinal vestibular nucleus
nTPM: 370.0
2748 Male, age 76, both hemispheres 512.4
2806 Female, age 85, both hemispheres 379.5
2780 Male, age 80, both hemispheres 352.5
2384 Male, age 74, both hemispheres 346.1
2186 Female, age 91, both hemispheres 339.2
2796 Male, age 61, both hemispheres 290.4
Subcoeruleus area
nTPM: 363.9
2369 Female, age 85, left hemisphere 478.4
1958 Male, age 80, both hemispheres 356.2
2451 Male, age 74, both hemispheres 348.9
2323 Female, age 91, left hemisphere 330.7
2089 Male, age 76, left hemisphere 305.2
Superior olive
nTPM: 336.5
2020 Male, age 76, both hemispheres 398.8
2364 Male, age 74, right hemisphere 335.8
2561 Female, age 91, both hemispheres 329.0
2329 Male, age 80, right hemisphere 318.2
1875 Female, age 85, both hemispheres 300.7
Superior vestibular nucleus
nTPM: 411.0
2061 Male, age 76, both hemispheres 600.7
2015 Male, age 80, both hemispheres 357.4
2383 Male, age 74, both hemispheres 274.9
Ventral medullary reticular nucleus
nTPM: 463.8
2060 Male, age 76, both hemispheres 475.8
2372 Male, age 61, both hemispheres 451.8
Ventral periolivary nuclei
nTPM: 334.6
2023 Male, age 76, both hemispheres 449.5
2165 Male, age 80, both hemispheres 331.6
2794 Female, age 91, left hemisphere 289.3
2130 Female, age 85, both hemispheres 268.0
Ventrolateral medulla, A1-C1 cell groups
nTPM: 451.0
1986 Male, age 76, both hemispheres 631.7
2180 Male, age 61, both hemispheres 456.4
2118 Male, age 80, both hemispheres 407.1
2302 Female, age 91, both hemispheres 404.4
2741 Female, age 85, both hemispheres 355.3
Ventrolateral tegmental area, A5 NE cell group
nTPM: 408.1
2359 Male, age 61, both hemispheres 550.7
2456 Female, age 91, both hemispheres 454.7
1959 Male, age 76, both hemispheres 385.9
2161 Male, age 80, both hemispheres 372.9
2840 Female, age 85, both hemispheres 348.9
2449 Male, age 74, both hemispheres 335.5

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 714.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 714.3
FF:10165-103B3 76 years, female 924.1
FF:10182-103D2 60 years, female 504.4
Medulla oblongata
Scaled Tags Per Million: 629.5
FF:10038-101F2 18-64 years, mixed 821.8
FF:10155-103A2 76 years, female 650.8
FF:10174-103C3 60 years, female 415.9
Pons
Scaled Tags Per Million: 602.9
FF:10033-101E6 18-54 years, mixed 602.9

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 1698.8
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 1698.8
Samples: 4

Max nTPM: 1863.6
Min nTPM: 1582.8
Sample A Female 1605.2
Sample B Female 1863.6
Sample C Male 1743.4
Sample D Male 1582.8
Pons
nTPM: 1326.5
Samples: 4

Max nTPM: 1937.0
Min nTPM: 984.0
Sample A Female 1219.7
Sample B Female 984.0
Sample C Male 1165.3
Sample D Male 1937.0

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 1399.5
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 1399.5
Samples: 4

Max nTPM: 1531.1
Min nTPM: 1279.7
Sample A Male 1279.7
Sample B Male 1311.8
Sample C Female 1531.1
Sample D Female 1475.2

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 16.5
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 16.5
74047918 Antisense, RP_051214_02_D03, Mouse strain C57BL/6J (56 days, male) 20.9
67978757 Antisense, RP_040923_01_G08, Mouse strain C57BL/6J (56 days, male) 18.1
74988768 Antisense, RP_060315_05_H12, Mouse strain C57BL/6J (56 days, male) 13.7
70919872 Antisense, RP_050713_02_C01, Mouse strain C57BL/6J (56 days, male) 13.4
Pons
Expression energy: 15.8
74047918 Antisense, RP_051214_02_D03, Mouse strain C57BL/6J (56 days, male) 19.3
67978757 Antisense, RP_040923_01_G08, Mouse strain C57BL/6J (56 days, male) 18.8
74988768 Antisense, RP_060315_05_H12, Mouse strain C57BL/6J (56 days, male) 13.1
70919872 Antisense, RP_050713_02_C01, Mouse strain C57BL/6J (56 days, male) 11.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org