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PEA15
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  • PEA15
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:594.7 nTPM
FANTOM5:940.7 Scaled Tags Per Million
Pig:292.1 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA070820
Glial cells Medium
Neuronal cells Not detected



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

594.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 594.7
Samples: 246

Max nTPM: 1194.6
Min nTPM: 227.4
Std nTPM: 190.1
Median nTPM: 549.2
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 1194.6
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 1121.4
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 1085.6
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 1079.8
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 1050.5
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 1048.9
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 1047.7
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 1031.0
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 1028.2
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 1017.0
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 1011.7
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 1003.5
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 981.9
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 976.6
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 971.5
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 967.1
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 931.2
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 921.4
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 920.2
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 916.7
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 899.4
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 886.1
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 882.8
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 881.6
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 879.5
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 871.5
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 863.9
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 862.9
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 850.8
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 843.2
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 833.2
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 822.4
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 821.1
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 816.4
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 809.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 808.8
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 808.5
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 804.8
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 792.0
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 789.0
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 785.2
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 774.3
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 771.6
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 768.0
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 764.2
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 763.5
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 761.1
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 754.1
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 751.6
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 749.3
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 749.1
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 744.0
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 735.6
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 734.9
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 733.2
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 731.0
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 727.8
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 719.2
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 716.0
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 713.4
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 709.9
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 709.6
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 706.7
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 703.9
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 703.3
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 699.7
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 694.0
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 688.0
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 679.3
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 678.1
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 677.4
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 676.4
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 676.0
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 672.1
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 667.4
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 666.5
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 659.0
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 658.1
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 656.7
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 647.5
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 644.9
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 642.8
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 642.5
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 638.6
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 638.0
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 634.8
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 633.1
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 631.5
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 625.2
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 621.9
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 618.1
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 617.7
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 616.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 615.0
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 612.2
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 607.8
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 604.0
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 602.1
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 600.8
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 600.7
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 600.2
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 597.4
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 596.1
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 594.9
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 594.1
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 594.0
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 593.4
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 591.8
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 590.1
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 590.0
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 588.0
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 586.3
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 583.7
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 582.6
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 581.0
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 580.1
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 576.8
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 564.4
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 561.4
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 556.5
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 553.5
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 553.1
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 551.7
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 546.6
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 543.9
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 543.7
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 543.6
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 541.2
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 538.2
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 537.0
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 535.8
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 535.2
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 534.8
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 528.7
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 527.8
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 525.7
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 525.5
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 524.6
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 524.4
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 523.4
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 523.1
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 520.6
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 520.4
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 518.8
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 517.7
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 517.6
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 516.5
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 515.4
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 515.1
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 515.0
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 513.2
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 512.8
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 512.5
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 512.2
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 511.6
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 506.4
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 506.0
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 501.5
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 500.3
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 498.3
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 495.2
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 493.8
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 493.2
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 488.3
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 485.2
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 483.2
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 482.7
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 482.7
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 482.6
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 478.8
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 478.2
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 477.4
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 476.7
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 476.5
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 475.4
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 470.8
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 470.5
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 465.6
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 464.6
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 462.6
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 459.6
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 459.5
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 459.4
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 451.9
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 450.8
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 448.8
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 448.7
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 445.4
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 445.0
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 443.8
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 443.7
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 442.9
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 441.4
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 439.2
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 438.8
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 436.4
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 435.2
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 435.1
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 432.6
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 431.0
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 428.8
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 427.2
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 416.8
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 416.2
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 415.3
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 413.4
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 412.2
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 411.9
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 411.8
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 411.7
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 409.6
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 409.2
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 404.4
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 402.9
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 402.8
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 402.0
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 400.7
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 398.5
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 395.0
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 383.6
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 379.6
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 378.5
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 374.8
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 371.2
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 367.1
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 366.0
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 365.6
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 365.5
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 364.6
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 364.3
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 361.6
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 352.7
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 351.6
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 350.6
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 349.0
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 342.8
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 340.6
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 337.0
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 318.1
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 313.2
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 307.5
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 303.4
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 293.7
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 293.2
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 265.2
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 227.4
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

940.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 940.7
FF:10164-103B2 76 years, female 940.7

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

292.1
Pig sample Sample description nTPM
Caudate
nTPM: 292.1
Samples: 4

Max nTPM: 306.6
Min nTPM: 260.9
Sample A Female 306.6
Sample B Female 302.4
Sample C Male 298.4
Sample D Male 260.9

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