HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Not detected
RNA expressioni
Consensus:590.7 nTPM
HPA Brain:656.1 nTPM
GTEx:590.7 nTPM
FANTOM5:1110.3 Scaled Tags Per Million
Pig:544.9 nTPM
Mouse:515.0 nTPM
Allen mouse:19.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA070820
Glial cells Medium
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 656.1
Sample id Sample description nTPM
Hippocampus
nTPM: 501.0
1855 Male, age 76, left hemisphere 674.7
1898 Male, age 80, left hemisphere 577.7
2529 Female, age 94, left hemisphere 486.0
2621 Female, age 67, right hemisphere 452.6
2148 Female, age 91, left hemisphere 415.6
1911 Female, age 85, right hemisphere 399.2
Dentate gyrus
nTPM: 478.0
2010 Male, age 76, both hemispheres 590.8
2246 Female, age 85, both hemispheres 585.4
2530 Female, age 94, left hemisphere 568.3
2531 Female, age 67, both hemispheres 425.6
2528 Male, age 74, both hemispheres 387.4
1927 Female, age 91, both hemispheres 310.6
Entorhinal gyrus
nTPM: 510.9
2764 Male, age 80, right hemisphere 584.7
1787 Male, age 76, left hemisphere 563.1
2686 Male, age 75, right hemisphere 541.4
1938 Female, age 85, left hemisphere 528.5
2117 Female, age 91, right hemisphere 448.2
2613 Female, age 94, left hemisphere 399.5
Hippocampus, CA1
nTPM: 474.6
2045 Male, age 76, both hemispheres 652.5
1873 Female, age 85, both hemispheres 523.8
2082 Female, age 91, right hemisphere 438.9
2527 Male, age 74, both hemispheres 399.5
2749 Male, age 80, left hemisphere 358.1
Hippocampus, CA2
nTPM: 434.7
1940 Female, age 85, left hemisphere 542.5
1892 Male, age 76, both hemispheres 452.7
2437 Female, age 94, left hemisphere 424.3
1963 Male, age 80, left hemisphere 421.2
2113 Female, age 91, right hemisphere 416.5
2249 Male, age 74, both hemispheres 351.0
Hippocampus, CA3
nTPM: 414.4
2861 Female, age 67, both hemispheres 525.3
2620 Female, age 94, left hemisphere 501.6
1891 Female, age 85, both hemispheres 435.4
1867 Male, age 76, both hemispheres 420.9
2137 Male, age 80, left hemisphere 304.6
2436 Male, age 74, both hemispheres 298.4
Parahippocampal cortex
nTPM: 518.0
1850 Male, age 80, both hemispheres 665.3
2018 Male, age 76, both hemispheres 629.8
1933 Female, age 85, both hemispheres 619.7
2532 Female, age 72, left hemisphere 518.3
2622 Female, age 67, right hemisphere 509.6
2250 Female, age 67, right hemisphere 492.0
2693 Female, age 94, both hemispheres 481.7
2245 Female, age 91, both hemispheres 470.6
2692 Male, age 74, both hemispheres 448.9
1990 Female, age 91, right hemisphere 343.8
Perirhinal gyrus
nTPM: 656.1
2848 Male, age 76, right hemisphere 719.9
1794 Male, age 80, right hemisphere 716.9
1841 Female, age 85, right hemisphere 685.9
1847 Female, age 91, left hemisphere 596.5
2521 Female, age 94, right hemisphere 561.2
Subiculum
nTPM: 441.4
1977 Female, age 85, both hemispheres 509.1
2042 Male, age 76, both hemispheres 496.8
2729 Female, age 91, right hemisphere 433.9
2438 Female, age 94, left hemisphere 425.2
2619 Male, age 74, both hemispheres 420.6
1901 Male, age 80, both hemispheres 362.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 590.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 590.7
Samples: 197

Max nTPM: 1543.0
Min nTPM: 191.9
Std nTPM: 145.0
Median nTPM: 574.0
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 1543.0
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 1134.5
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 1038.5
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 1017.8
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 931.5
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 875.9
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 859.2
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 843.0
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 827.6
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 815.4
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 815.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 1110.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 1110.3
FF:10169-103B7 60 years, female 1248.3
FF:10153-102I9 76 years, female 972.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 544.9
Pig sample Sample description nTPM
Subiculum
nTPM: 484.0
Samples: 4

Max nTPM: 635.2
Min nTPM: 421.7
Sample A Female 635.2
Sample B Female 453.7
Sample C Male 421.7
Sample D Male 425.3
Dorsal hippocampus
nTPM: 544.9
Samples: 4

Max nTPM: 769.9
Min nTPM: 319.5
Sample A Female 769.9
Sample B Female 505.2
Sample C Male 585.0
Sample D Male 319.5
Entorhinal cortex
nTPM: 444.6
Samples: 4

Max nTPM: 478.1
Min nTPM: 393.9
Sample A Female 456.1
Sample B Female 450.1
Sample C Male 478.1
Sample D Male 393.9
Ventral hippocampus
nTPM: 513.5
Samples: 4

Max nTPM: 596.0
Min nTPM: 401.7
Sample A Female 566.6
Sample B Female 401.7
Sample C Male 596.0
Sample D Male 489.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 515.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 515.0
Samples: 4

Max nTPM: 543.5
Min nTPM: 494.8
Sample A Male 494.8
Sample B Male 497.4
Sample C Female 524.4
Sample D Female 543.5
Hippocampal formation
nTPM: 497.8
Samples: 4

Max nTPM: 569.4
Min nTPM: 462.5
Sample A Male 569.4
Sample B Male 462.5
Sample C Female 486.8
Sample D Female 472.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 19.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 19.6
68193012 Antisense, RP_040928_01_B12, Mouse strain C57BL/6J (56 days, male) 24.5
70928292 Antisense, RP_050725_02_C07, Mouse strain C57BL/6J (56 days, male) 17.5
77414654 Antisense, RP_070205_01_H12, Mouse strain C57BL/6J (56 days, male) 16.8

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