We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
CKB
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • CKB
BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:850.1 nTPM
HPA Brain:1392.7 nTPM
GTEx:850.1 nTPM
FANTOM5:4390.9 Scaled Tags Per Million
Pig:1299.1 nTPM
Mouse:1664.7 nTPM
Allen mouse:25.7 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA001254Antibody CAB047313
Glial cells LowMedium
Neuronal cells Not detectedNot detected





BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1392.7
Sample id Sample description nTPM
Caudate nucleus
nTPM: 1392.7
2481 Female, age 94, left hemisphere 1594.2
2289 Male, age 61, right hemisphere 1534.6
2290 Female, age 72, unknown 1507.0
1857 Female, age 85, left hemisphere 1456.7
2288 Male, age 75, left hemisphere 1361.2
1854 Male, age 80, left hemisphere 1294.9
2846 Female, age 79, unknown 1226.9
1781 Male, age 74, unknown 1166.4
Globus pallidus, externus
nTPM: 1165.0
2646 Male, age 61, right hemisphere 1654.9
2772 Female, age 79, unknown 1343.0
1996 Male, age 80, right hemisphere 1330.4
2395 Male, age 75, both hemispheres 824.0
2567 Female, age 72, unknown 672.6
Globus pallidus, internus
nTPM: 1083.6
2483 Female, age 94, right hemisphere 1579.1
2287 Male, age 75, right hemisphere 1577.2
1818 Male, age 74, unknown 1208.9
2037 Male, age 80, right hemisphere 1036.2
2778 Female, age 91, both hemispheres 900.8
2111 Female, age 85, right hemisphere 687.8
2566 Female, age 72, unknown 594.8
Nucleus accumbens
nTPM: 1187.7
2286 Male, age 75, left hemisphere 1523.7
1806 Female, age 85, left hemisphere 1466.3
1783 Male, age 74, unknown 1343.4
1856 Female, age 91, right hemisphere 1281.6
2824 Male, age 61, right hemisphere 1274.7
2698 Female, age 72, unknown 979.6
2391 Female, age 94, left hemisphere 821.0
2732 Male, age 80, right hemisphere 811.2
Nucleus basalis of Meynert
nTPM: 1148.5
2569 Male, age 61, both hemispheres 1678.8
2484 Female, age 94, left hemisphere 1197.1
2393 Male, age 80, right hemisphere 975.5
2821 Male, age 75, both hemispheres 742.4
Nucleus of the diagonal band
nTPM: 997.4
2195 Female, age 85, both hemispheres 1139.2
2775 Male, age 80, right hemisphere 1057.9
1812 Female, age 91, both hemispheres 1003.0
2029 Male, age 61, right hemisphere 945.8
1979 Male, age 74, unknown 841.2
Putamen
nTPM: 1249.1
2466 Female, age 79, unknown 1451.2
1829 Male, age 74, unknown 1432.8
1838 Male, age 80, right hemisphere 1311.6
1937 Female, age 91, right hemisphere 1257.1
2482 Female, age 94, left hemisphere 1182.4
2647 Male, age 75, left hemisphere 1142.1
2489 Female, age 72, unknown 966.6
Septal nuclei
nTPM: 952.7
1960 Male, age 74, unknown 1411.2
2059 Female, age 85, both hemispheres 1230.4
2031 Female, age 72, unknown 1063.9
2009 Female, age 91, both hemispheres 878.7
2629 Female, age 94, right hemisphere 757.2
2199 Male, age 80, right hemisphere 673.5
2394 Male, age 61, left hemisphere 654.2
Stria terminalis, bed nucleus
nTPM: 793.3
1974 Female, age 91, both hemispheres 962.1
2486 Female, age 94, both hemispheres 824.1
2201 Male, age 74, unknown 593.5

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

850.1
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 845.1
Samples: 246

Max nTPM: 1815.0
Min nTPM: 257.1
Std nTPM: 270.7
Median nTPM: 847.8
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 1815.0
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 1565.8
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 1485.4
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 1463.4
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 1412.7
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 1408.9
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 1404.9
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 1394.0
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 1385.2
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 1369.6
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 1352.5
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 1339.7
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 1335.0
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 1327.2
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 1290.5
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 1284.3
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 1281.2
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 1277.7
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 1263.3
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 1255.4
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 1240.7
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 1237.2
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 1233.8
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 1225.0
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 1214.5
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 1211.9
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 1211.6
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 1211.1
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 1204.4
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 1171.9
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 1169.4
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 1164.1
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 1158.0
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 1156.8
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 1142.1
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 1138.4
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 1134.9
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 1132.5
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 1125.6
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 1109.2
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 1097.2
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 1089.9
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 1086.0
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 1072.9
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 1071.8
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 1060.6
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 1057.7
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 1051.5
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 1050.5
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 1049.6
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 1047.0
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 1042.4
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 1034.0
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 1033.7
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 1030.9
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 1029.4
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 1028.9
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 1025.0
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 1015.0
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 1012.2
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 1011.7
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 1010.6
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 1010.3
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 1009.7
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 1006.2
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 1000.7
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 994.6
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 993.7
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 992.2
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 989.8
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 986.6
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 985.2
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 984.4
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 982.4
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 982.3
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 981.5
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 981.2
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 974.1
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 972.7
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 962.2
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 959.3
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 957.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 954.5
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 949.7
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 943.6
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 943.5
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 937.2
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 936.2
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 933.2
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 930.8
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 930.4
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 930.4
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 926.6
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 924.3
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 922.3
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 920.8
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 917.2
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 916.2
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 914.4
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 912.8
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 908.4
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 908.0
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 908.0
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 905.7
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 903.5
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 902.8
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 899.2
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 899.1
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 895.5
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 890.6
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 880.4
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 877.6
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 876.6
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 871.8
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 868.8
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 868.5
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 867.4
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 867.0
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 863.8
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 863.7
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 861.0
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 852.6
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 849.4
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 846.2
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 845.8
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 839.6
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 825.9
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 822.7
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 819.8
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 813.6
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 812.9
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 811.0
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 803.8
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 797.9
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 793.4
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 793.3
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 792.9
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 786.1
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 782.2
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 779.4
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 773.2
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 768.6
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 767.8
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 764.1
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 760.4
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 756.0
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 751.4
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 750.2
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 743.8
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 741.8
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 737.9
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 737.8
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 737.5
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 735.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 731.7
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 725.8
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 720.1
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 717.9
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 712.6
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 712.4
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 707.6
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 702.9
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 700.9
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 693.3
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 691.0
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 679.5
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 678.8
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 676.2
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 675.1
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 673.3
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 670.4
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 669.4
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 659.1
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 658.5
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 657.0
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 655.5
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 655.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 654.9
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 654.6
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 649.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 648.1
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 644.0
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 643.0
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 641.4
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 641.0
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 638.0
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 637.1
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 635.8
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 633.8
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 630.1
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 622.7
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 622.3
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 619.7
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 611.7
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 611.7
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 611.1
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 601.4
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 600.1
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 597.2
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 589.5
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 587.0
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 586.8
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 578.3
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 574.5
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 571.1
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 566.8
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 566.1
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 565.5
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 563.2
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 562.4
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 558.2
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 555.5
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 552.2
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 549.2
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 546.1
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 534.8
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 531.3
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 530.2
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 529.6
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 529.0
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 528.2
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 527.6
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 525.6
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 502.6
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 500.7
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 491.3
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 482.7
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 473.7
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 471.3
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 454.1
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 442.2
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 439.5
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 435.7
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 432.4
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 430.7
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 429.7
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 427.6
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 420.6
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 411.7
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 405.9
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 380.8
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 347.2
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 336.6
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 328.2
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 273.7
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 257.1
Show allShow less
Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 775.4
Samples: 246

Max nTPM: 1431.2
Min nTPM: 88.9
Std nTPM: 230.0
Median nTPM: 783.9
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 1431.2
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 1379.1
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 1334.6
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 1308.3
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 1291.9
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 1270.4
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 1255.1
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 1254.5
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 1237.3
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 1232.6
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 1212.0
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 1210.8
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 1198.9
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 1196.6
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 1174.6
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 1134.3
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 1132.4
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 1111.9
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 1070.1
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 1056.3
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 1055.0
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 1054.0
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 1053.6
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 1051.7
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 1050.8
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 1049.0
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 1042.5
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 1042.0
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 1032.1
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 1030.8
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 1028.8
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 1027.2
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 1022.0
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 1019.6
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 1018.2
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 1009.8
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 1008.4
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 1005.6
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 999.1
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 986.7
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 981.5
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 973.3
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 963.7
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 962.0
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 960.3
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 958.9
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 958.5
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 953.0
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 947.5
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 945.5
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 944.7
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 942.6
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 941.7
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 931.5
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 923.7
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 921.2
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 920.5
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 910.5
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 909.9
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 906.0
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 900.6
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 898.9
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 896.9
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 895.4
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 895.0
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 892.6
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 892.2
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 890.3
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 890.1
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 887.7
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 887.0
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 886.6
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 886.4
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 883.3
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 878.1
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 877.4
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 874.2
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 873.1
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 868.7
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 866.7
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 866.5
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 864.9
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 863.2
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 862.4
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 854.9
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 851.4
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 847.5
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 846.9
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 846.8
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 842.3
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 841.5
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 838.1
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 834.1
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 833.7
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 831.5
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 831.2
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 830.8
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 829.1
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 827.7
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 827.4
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 827.3
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 824.3
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 822.2
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 821.2
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 820.8
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 819.6
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 819.3
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 818.5
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 815.8
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 815.0
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 814.0
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 808.8
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 807.2
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 804.3
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 801.7
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 799.7
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 798.0
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 796.6
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 792.9
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 791.4
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 791.1
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 786.0
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 784.1
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 783.8
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 783.4
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 782.9
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 780.6
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 778.6
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 777.6
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 776.2
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 774.7
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 770.9
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 770.3
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 769.1
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 768.4
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 764.4
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 763.1
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 762.4
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 759.3
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 757.4
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 756.5
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 754.2
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 754.2
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 744.5
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 742.1
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 741.6
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 739.2
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 736.1
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 724.9
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 724.4
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 720.2
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 717.8
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 715.7
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 713.4
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 712.5
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 711.6
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 710.3
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 709.5
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 705.9
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 704.9
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 703.9
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 702.2
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 698.0
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 694.3
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 691.6
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 691.1
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 691.1
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 689.9
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 688.7
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 683.3
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 681.3
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 679.1
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 677.8
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 675.7
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 672.2
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 672.1
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 665.7
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 661.5
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 654.8
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 654.4
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 654.2
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 645.7
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 635.9
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 627.0
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 626.6
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 618.7
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 616.6
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 604.8
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 602.4
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 600.3
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 595.0
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 594.5
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 594.0
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 589.6
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 588.1
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 586.6
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 581.2
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 578.1
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 577.9
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 565.0
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 564.1
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 563.6
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 561.3
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 553.1
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 551.0
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 549.8
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 549.1
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 547.6
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 540.7
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 539.3
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 530.9
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 530.8
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 526.8
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 521.3
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 519.7
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 505.6
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 505.4
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 502.3
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 499.4
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 497.0
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 493.7
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 493.0
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 483.3
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 480.1
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 476.6
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 469.1
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 456.4
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 447.1
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 436.0
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 429.9
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 419.3
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 414.2
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 399.4
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 397.2
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 394.9
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 383.6
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 316.0
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 294.0
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 286.7
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 275.4
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 269.3
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 261.3
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 259.9
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 259.1
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 231.3
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 88.9
Show allShow less
Brain - Putamen (basal ganglia)
Average nTPM: 850.1
Samples: 205

Max nTPM: 1617.6
Min nTPM: 277.1
Std nTPM: 252.5
Median nTPM: 842.7
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 1617.6
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 1408.8
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 1400.8
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 1385.0
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 1375.9
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 1373.0
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 1351.9
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 1326.4
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 1323.0
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 1309.7
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 1303.1
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 1280.8
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 1269.6
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 1255.2
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 1244.2
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 1240.8
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 1226.8
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 1218.1
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 1214.9
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 1202.0
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 1200.6
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 1195.6
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 1185.1
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 1181.0
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 1161.5
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 1160.1
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 1155.1
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 1133.8
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 1133.6
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 1125.1
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 1122.9
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 1122.9
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 1121.0
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 1115.1
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 1113.1
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 1109.6
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 1106.4
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 1104.8
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 1103.9
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 1101.9
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 1101.0
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 1097.7
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 1088.2
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 1084.3
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 1070.1
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 1058.4
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 1038.6
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 1019.2
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 1015.1
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 996.7
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 993.6
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 991.5
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 989.6
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 989.1
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 972.9
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 971.8
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 968.8
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 968.0
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 967.0
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 965.4
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 954.4
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 950.4
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 948.2
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 946.2
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 945.9
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 939.9
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 939.1
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 937.7
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 935.0
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 932.9
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 929.7
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 927.7
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 924.1
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 924.0
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 922.0
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 916.6
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 916.1
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 912.8
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 911.6
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 910.0
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 909.1
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 906.3
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 903.7
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 897.3
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 896.7
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 890.9
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 889.4
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 877.9
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 877.3
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 875.5
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 874.3
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 863.1
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 862.1
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 862.0
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 861.9
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 857.6
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 854.5
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 852.9
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 852.1
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 846.5
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 845.6
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 843.7
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 842.7
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 838.3
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 837.1
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 834.1
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 832.8
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 832.1
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 828.6
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 824.7
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 815.4
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 813.7
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 812.2
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 811.3
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 805.5
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 801.4
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 799.5
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 799.4
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 797.5
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 787.5
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 785.5
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 783.7
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 775.5
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 775.3
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 774.5
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 769.6
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 763.6
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 761.9
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 758.9
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 745.1
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 744.7
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 744.3
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 742.2
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 738.4
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 737.9
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 734.7
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 726.7
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 725.2
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 722.1
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 721.5
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 720.9
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 720.6
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 720.6
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 715.7
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 711.8
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 711.4
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 710.0
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 705.6
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 696.7
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 696.2
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 694.8
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 694.4
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 693.5
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 690.8
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 685.7
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 679.1
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 679.0
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 675.9
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 675.9
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 669.0
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 649.2
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 645.8
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 642.9
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 642.2
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 641.8
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 640.5
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 621.5
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 613.4
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 609.9
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 609.8
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 602.9
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 600.3
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 593.3
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 590.5
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 589.5
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 583.9
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 581.1
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 575.4
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 575.0
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 570.8
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 570.0
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 553.7
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 549.6
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 527.1
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 513.2
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 510.4
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 509.5
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 503.7
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 502.2
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 495.1
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 480.2
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 479.6
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 464.4
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 456.5
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 424.9
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 424.7
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 421.5
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 418.1
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 383.9
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 376.7
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 341.1
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 334.4
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 321.7
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 315.7
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 277.1
Show allShow less

BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

4390.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 4265.0
FF:10164-103B2 76 years, female 4265.0
Nucleus accumbens
Scaled Tags Per Million: 4373.4
FF:10037-101F1 23-56 years, mixed 4373.4
Putamen
Scaled Tags Per Million: 4390.9
FF:10176-103C5 60 years, female 4390.9
Globus pallidus
Scaled Tags Per Million: 2716.8
FF:10175-103C4 60 years, female 3483.5
FF:10161-103A8 76 years, female 1950.0

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1299.1
Pig sample Sample description nTPM
Caudate
nTPM: 1154.7
Samples: 4

Max nTPM: 1499.6
Min nTPM: 847.8
Sample A Female 847.8
Sample B Female 1217.6
Sample C Male 1499.6
Sample D Male 1053.9
Putamen
nTPM: 1299.1
Samples: 4

Max nTPM: 1961.3
Min nTPM: 846.2
Sample A Female 846.2
Sample B Female 1073.7
Sample C Male 1961.3
Sample D Male 1315.2
Septum
nTPM: 487.5
Samples: 4

Max nTPM: 541.0
Min nTPM: 408.8
Sample A Female 536.9
Sample B Female 541.0
Sample C Male 463.1
Sample D Male 408.8
Ventral pallidum
nTPM: 746.4
Samples: 4

Max nTPM: 935.1
Min nTPM: 631.7
Sample A Female 631.7
Sample B Female 935.1
Sample C Male 750.5
Sample D Male 668.2

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1664.7
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 1664.7
Samples: 4

Max nTPM: 2359.3
Min nTPM: 1136.6
Sample A Male 1801.8
Sample B Male 2359.3
Sample C Female 1136.6
Sample D Female 1361.0
Septum
nTPM: 1275.8
Samples: 4

Max nTPM: 1415.5
Min nTPM: 1125.7
Sample A Male 1167.0
Sample B Male 1415.5
Sample C Female 1395.1
Sample D Female 1125.7
Ventral forebrain
nTPM: 1487.8
Samples: 4

Max nTPM: 1793.7
Min nTPM: 1219.6
Sample A Male 1547.3
Sample B Male 1390.5
Sample C Female 1793.7
Sample D Female 1219.6

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

25.7
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 25.7
70927826 Antisense, RP_050725_01_B02, Mouse strain C57BL/6J (56 days, male) 26.9
393211 Antisense, RP_040804_02_D11, Mouse strain C57BL/6J (56 days, male) 24.6
Pallidum
Expression energy: 19.6
70927826 Antisense, RP_050725_01_B02, Mouse strain C57BL/6J (56 days, male) 20.3
393211 Antisense, RP_040804_02_D11, Mouse strain C57BL/6J (56 days, male) 19.0

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org