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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
815.5
nTPM
FANTOM5:
3032.3
Scaled Tags Per Million
Pig:
819.2
nTPM
Allen mouse:
18.0
Expression energy
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
815.5
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 730.7
1984
Male, age 76, both hemispheres
1142.6
2090
Male, age 80, both hemispheres
620.8
2301
Female, age 85, both hemispheres
606.6
2188
Female, age 91, both hemispheres
552.9
Dorsal cochlear nucleus nTPM: 815.5
2802
Male, age 74, right hemisphere
1011.9
2058
Male, age 76, both hemispheres
938.0
2370
Male, age 61, both hemispheres
801.7
2378
Male, age 80, both hemispheres
666.0
2187
Female, age 91, both hemispheres
660.0
Dorsal tegmental nucleus nTPM: 645.0
2083
Male, age 80, both hemispheres
803.7
1936
Male, age 76, left hemisphere
729.1
2326
Male, age 74, both hemispheres
686.5
2358
Male, age 61, both hemispheres
360.7
Dorsolateral tegmental area nTPM: 629.9
2141
Male, age 76, both hemispheres
764.0
2751
Female, age 85, both hemispheres
714.7
2654
Male, age 80, both hemispheres
706.2
2360
Male, age 74, both hemispheres
701.2
2337
Male, age 61, both hemispheres
263.7
Kolliker-Fuse nucleus nTPM: 631.2
2315
Male, age 76, right hemisphere
653.3
2163
Male, age 80, both hemispheres
641.4
2793
Female, age 91, left hemisphere
598.9
Lateral lemniscal nuclei nTPM: 689.3
2169
Male, age 76, both hemispheres
999.3
2453
Male, age 74, right hemisphere
668.3
2036
Male, age 80, both hemispheres
608.1
2746
Female, age 85, left hemisphere
604.9
2320
Female, age 91, left hemisphere
566.1
Lateral parabrachial nucleus nTPM: 583.7
2139
Female, age 85, right hemisphere
875.1
2013
Male, age 80, both hemispheres
616.9
2792
Male, age 76, both hemispheres
497.2
2790
Male, age 61, both hemispheres
345.6
Lateral vestibular nucleus nTPM: 795.3
2184
Male, age 76, both hemispheres
874.9
2311
Male, age 80, both hemispheres
715.7
Locus coeruleus nTPM: 669.9
2123
Female, age 91, both hemispheres
902.0
2014
Male, age 55, unknown
738.7
2317
Female, age 72, unknown
705.3
1980
Male, age 76, both hemispheres
668.2
2162
Male, age 80, both hemispheres
617.2
2720
Male, age 74, both hemispheres
605.7
2788
Male, age 74, unknown
452.1
Medial parabrachial nucleus nTPM: 677.0
2463
Female, age 85, right hemisphere
800.1
2170
Female, age 91, both hemispheres
705.6
2786
Male, age 76, both hemispheres
699.1
2854
Male, age 80, both hemispheres
637.3
2156
Male, age 61, both hemispheres
543.1
Medial periolivary nuclei nTPM: 655.7
2063
Male, age 76, both hemispheres
951.2
2171
Female, age 85, both hemispheres
674.6
2791
Male, age 74, right hemisphere
586.0
2458
Female, age 91, both hemispheres
559.7
2081
Male, age 80, both hemispheres
506.9
Motor facial nucleus nTPM: 728.7
2062
Male, age 76, both hemispheres
1124.2
2795
Female, age 91, both hemispheres
817.6
2126
Male, age 61, both hemispheres
688.7
2365
Male, age 74, right hemisphere
624.6
2327
Male, age 80, both hemispheres
598.8
2697
Female, age 85, both hemispheres
518.4
Motor trigeminal nucleus nTPM: 587.7
2079
Male, age 80, both hemispheres
632.9
2560
Male, age 74, both hemispheres
601.2
2335
Male, age 61, both hemispheres
592.0
2309
Male, age 76, both hemispheres
579.8
2321
Female, age 91, both hemispheres
532.4
Nuclei of the trapezoid body nTPM: 801.9
1983
Male, age 76, both hemispheres
1029.3
2159
Male, age 61, both hemispheres
955.4
2735
Female, age 85, both hemispheres
700.5
2166
Male, age 80, both hemispheres
667.3
2368
Female, age 91, both hemispheres
656.9
Nucleus raphe magnus nTPM: 699.0
2051
Male, age 76, both hemispheres
836.2
2455
Male, age 74, both hemispheres
793.5
2328
Male, age 80, both hemispheres
734.0
2160
Male, age 61, both hemispheres
732.8
2172
Female, age 85, both hemispheres
555.0
2459
Female, age 91, both hemispheres
542.7
Paramedian reticular nucleus nTPM: 620.4
2057
Male, age 80, both hemispheres
703.7
2050
Female, age 85, both hemispheres
678.4
2313
Male, age 61, both hemispheres
667.2
2052
Male, age 76, both hemispheres
432.1
Pedunculopontine tegmental nucleus nTPM: 585.2
1921
Female, age 85, both hemispheres
764.6
2334
Male, age 80, both hemispheres
638.8
2338
Male, age 61, both hemispheres
352.3
Pontine nuclei nTPM: 795.1
1863
Male, age 55, unknown
1324.0
1968
Male, age 76, left hemisphere
1049.1
2109
Female, age 72, unknown
913.8
2787
Female, age 85, both hemispheres
800.7
2454
Male, age 74, left hemisphere
609.5
2115
Male, age 80, left hemisphere
572.1
2727
Male, age 61, right hemisphere
554.4
2319
Female, age 91, both hemispheres
537.6
Pontine raphe nucleus nTPM: 674.3
2122
Female, age 85, midline
702.5
2853
Male, age 76, midline
646.1
Posteroventral cochlear nucleus nTPM: 669.4
2070
Male, age 76, both hemispheres
798.3
2371
Male, age 61, both hemispheres
785.1
2752
Female, age 85, both hemispheres
752.7
2341
Male, age 80, both hemispheres
549.6
2135
Female, age 91, both hemispheres
461.0
Principal sensory trigeminal nucleus nTPM: 692.1
2324
Male, age 76, both hemispheres
906.8
2158
Male, age 61, both hemispheres
754.8
2008
Male, age 80, left hemisphere
595.7
2367
Female, age 91, left hemisphere
511.1
Reticular pontine nucleus, caudal nTPM: 697.1
2092
Male, age 76, both hemispheres
868.9
2332
Male, age 80, right hemisphere
770.0
2457
Female, age 91, both hemispheres
677.4
2559
Male, age 74, both hemispheres
471.9
Reticular pontine nucleus, oral nTPM: 642.5
1939
Male, age 80, both hemispheres
713.8
2167
Male, age 76, both hemispheres
713.0
2012
Female, age 85, both hemispheres
699.2
2366
Female, age 91, both hemispheres
583.3
2361
Male, age 74, both hemispheres
503.4
Reticulotegmental nucleus nTPM: 750.9
2322
Female, age 91, both hemispheres
850.6
2333
Male, age 80, both hemispheres
807.5
2325
Male, age 76, both hemispheres
680.3
2452
Male, age 74, both hemispheres
665.2
Spinal trigeminal nucleus, oral nTPM: 759.8
1978
Male, age 76, both hemispheres
825.6
2737
Female, age 85, both hemispheres
762.7
2164
Male, age 80, both hemispheres
691.1
Subcoeruleus area nTPM: 670.4
2089
Male, age 76, left hemisphere
777.6
2323
Female, age 91, left hemisphere
708.6
2369
Female, age 85, left hemisphere
654.2
1958
Male, age 80, both hemispheres
606.6
2451
Male, age 74, both hemispheres
605.1
Superior olive nTPM: 639.1
2020
Male, age 76, both hemispheres
764.3
2329
Male, age 80, right hemisphere
643.7
1875
Female, age 85, both hemispheres
615.5
2364
Male, age 74, right hemisphere
611.8
2561
Female, age 91, both hemispheres
560.0
Ventral periolivary nuclei nTPM: 637.1
2165
Male, age 80, both hemispheres
789.7
2130
Female, age 85, both hemispheres
700.8
2023
Male, age 76, both hemispheres
607.3
2794
Female, age 91, left hemisphere
450.4
Ventrolateral tegmental area, A5 NE cell group nTPM: 639.0
1959
Male, age 76, both hemispheres
735.9
2449
Male, age 74, both hemispheres
700.4
2840
Female, age 85, both hemispheres
685.1
2456
Female, age 91, both hemispheres
630.5
2161
Male, age 80, both hemispheres
626.2
2359
Male, age 61, both hemispheres
456.2
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
819.2
Pig sample
Sample description
nTPM
Pons nTPM: 819.2
Samples: 4
Max nTPM: 1024.3
Min nTPM: 552.3
Sample A
Female
923.4
Sample B
Female
552.3
Sample C
Male
776.7
Sample D
Male
1024.3
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.
The Human Protein Atlas project is funded
