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TISSUE PRIMARY DATA BASAL GANGLIA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:321.5 nTPM
HPA Brain:131.8 nTPM
GTEx:321.5 nTPM
FANTOM5:249.4 Scaled Tags Per Million
Pig:7.4 nTPM
Mouse:988.0 nTPM
Allen mouse:10.1 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA042777Antibody HPA048459
Glial cells MediumNot detected
Neuronal cells MediumMedium




BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

131.8
Sample id Sample description nTPM
Caudate nucleus
nTPM: 127.5
2846 Female, age 79, unknown 163.6
2481 Female, age 94, left hemisphere 158.3
2288 Male, age 75, left hemisphere 129.3
1854 Male, age 80, left hemisphere 122.2
1857 Female, age 85, left hemisphere 121.6
2290 Female, age 72, unknown 120.8
1781 Male, age 74, unknown 119.4
2289 Male, age 61, right hemisphere 84.6
Globus pallidus, externus
nTPM: 102.7
2395 Male, age 75, both hemispheres 142.7
2772 Female, age 79, unknown 141.6
1996 Male, age 80, right hemisphere 113.4
2646 Male, age 61, right hemisphere 62.6
2567 Female, age 72, unknown 53.3
Globus pallidus, internus
nTPM: 107.0
2287 Male, age 75, right hemisphere 144.0
2483 Female, age 94, right hemisphere 130.5
1818 Male, age 74, unknown 120.4
2037 Male, age 80, right hemisphere 109.5
2778 Female, age 91, both hemispheres 108.2
2566 Female, age 72, unknown 69.8
2111 Female, age 85, right hemisphere 67.0
Nucleus accumbens
nTPM: 131.8
1856 Female, age 91, right hemisphere 170.5
2698 Female, age 72, unknown 144.4
2391 Female, age 94, left hemisphere 142.4
2286 Male, age 75, left hemisphere 140.3
1806 Female, age 85, left hemisphere 123.6
1783 Male, age 74, unknown 123.1
2824 Male, age 61, right hemisphere 122.4
2732 Male, age 80, right hemisphere 87.7
Nucleus basalis of Meynert
nTPM: 101.3
2821 Male, age 75, both hemispheres 126.1
2393 Male, age 80, right hemisphere 115.5
2484 Female, age 94, left hemisphere 97.1
2569 Male, age 61, both hemispheres 66.5
Nucleus of the diagonal band
nTPM: 131.7
1812 Female, age 91, both hemispheres 180.3
2775 Male, age 80, right hemisphere 152.0
2195 Female, age 85, both hemispheres 126.6
2029 Male, age 61, right hemisphere 112.1
1979 Male, age 74, unknown 87.6
Putamen
nTPM: 121.0
2482 Female, age 94, left hemisphere 148.9
1937 Female, age 91, right hemisphere 146.5
2466 Female, age 79, unknown 143.6
1838 Male, age 80, right hemisphere 134.8
1829 Male, age 74, unknown 121.6
2647 Male, age 75, left hemisphere 77.3
2489 Female, age 72, unknown 74.0
Septal nuclei
nTPM: 116.9
2031 Female, age 72, unknown 154.4
1960 Male, age 74, unknown 152.2
2009 Female, age 91, both hemispheres 131.7
2629 Female, age 94, right hemisphere 115.2
2199 Male, age 80, right hemisphere 94.7
2059 Female, age 85, both hemispheres 92.2
2394 Male, age 61, left hemisphere 78.1
Stria terminalis, bed nucleus
nTPM: 108.5
1974 Female, age 91, both hemispheres 139.6
2201 Male, age 74, unknown 95.8
2486 Female, age 94, both hemispheres 90.2

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

321.5
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 304.3
Samples: 246

Max nTPM: 751.4
Min nTPM: 158.1
Std nTPM: 90.8
Median nTPM: 287.6
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 751.4
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 668.5
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 660.0
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 643.6
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 595.4
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 590.7
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 564.9
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 507.1
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 494.7
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 483.7
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 469.9
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 464.0
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 463.6
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 462.1
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 460.0
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 449.5
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 443.5
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 440.8
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 434.8
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 432.5
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 432.1
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 432.0
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 421.7
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 420.7
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 417.6
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 415.7
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 412.2
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 409.8
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 403.2
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 403.1
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 387.3
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 386.6
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 385.7
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 384.8
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 383.1
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 382.0
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 381.1
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 379.1
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 378.2
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 376.8
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 376.7
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 376.6
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 367.3
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 366.1
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 365.9
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 365.6
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 362.9
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 360.1
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 358.8
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 357.3
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 355.0
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 349.7
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 349.4
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 346.0
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 345.5
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 344.8
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 344.4
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 343.5
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 343.4
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 343.4
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 341.2
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 340.9
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 340.4
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 340.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 339.6
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 338.2
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 336.2
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 335.3
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 335.0
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 334.2
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 333.4
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 333.0
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 331.0
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 328.6
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 327.5
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 326.4
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 326.2
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 325.1
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 323.6
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 322.1
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 320.9
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 319.5
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 319.5
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 319.2
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 318.6
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 318.4
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 318.0
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 317.3
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 315.9
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 314.9
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 312.9
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 312.8
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 312.7
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 310.3
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 307.7
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 307.6
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 307.5
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 306.3
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 304.9
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 304.9
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 303.9
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 303.0
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 302.9
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 302.4
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 302.2
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 302.1
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 301.7
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 300.5
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 300.1
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 298.5
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 298.3
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 298.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 297.9
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 295.9
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 295.8
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 295.4
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 294.3
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 293.8
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 292.1
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 292.0
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 291.8
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 288.2
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 287.8
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 287.4
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 287.2
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 285.6
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 285.1
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 284.9
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 282.5
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 282.1
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 279.9
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 279.1
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 278.0
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 278.0
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 277.3
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 277.0
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 276.2
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 275.0
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 274.0
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 273.3
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 273.2
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 273.0
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 272.4
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 272.4
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 272.2
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 271.4
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 271.2
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 271.0
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 269.6
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 269.1
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 268.1
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 268.0
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 266.9
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 264.9
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 263.3
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 263.0
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 262.6
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 262.3
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 262.0
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 261.9
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 261.5
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 260.8
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 260.6
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 259.7
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 258.5
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 256.2
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 255.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 254.3
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 253.6
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 253.4
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 252.7
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 252.6
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 251.1
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 250.8
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 250.7
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 248.0
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 247.0
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 246.3
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 245.6
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 245.5
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 245.0
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 243.7
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 243.4
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 242.9
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 242.8
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 242.3
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 242.0
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 241.5
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 241.4
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 240.9
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 240.8
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 237.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 237.2
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 237.0
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 235.6
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 235.2
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 234.9
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 232.8
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 231.3
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 231.2
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 230.6
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 230.4
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 229.1
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 227.2
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 226.9
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 226.0
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 225.6
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 225.5
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 223.8
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 223.7
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 223.6
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 220.0
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 219.5
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 219.3
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 219.0
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 217.3
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 217.1
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 214.5
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 213.9
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 213.4
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 213.1
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 212.8
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 212.6
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 212.3
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 210.9
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 210.4
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 210.0
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 209.6
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 208.9
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 207.3
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 204.1
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 199.7
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 198.0
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 197.9
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 193.0
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 192.6
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 192.6
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 187.5
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 187.2
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 183.8
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 179.0
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 174.7
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 173.1
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 171.5
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 171.0
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 158.1
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 321.5
Samples: 246

Max nTPM: 622.2
Min nTPM: 164.4
Std nTPM: 79.7
Median nTPM: 312.7
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 622.2
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 609.8
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 569.3
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 551.0
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 539.0
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 536.8
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 522.1
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 498.9
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 471.9
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 467.5
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 467.1
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 454.4
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 450.8
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 450.4
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 446.4
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 444.0
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 443.1
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 442.3
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 440.3
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 439.1
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 435.5
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 435.4
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 433.7
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 433.2
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 431.3
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 431.3
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 430.0
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 427.4
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 424.1
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 423.4
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 416.4
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 414.9
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 411.1
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 405.5
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 402.1
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 399.5
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 399.2
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 392.0
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 391.8
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 391.7
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 391.6
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 390.7
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 390.6
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 388.4
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 388.1
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 386.2
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 384.9
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 384.1
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 381.3
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 379.4
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 378.9
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 378.4
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 376.3
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 373.9
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 373.4
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 372.9
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 372.8
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 371.6
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 370.9
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 370.1
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 369.5
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 368.9
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 368.5
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 366.7
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 366.1
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 364.4
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 364.2
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 364.2
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 362.8
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 361.3
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 359.2
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 357.1
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 353.9
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 350.4
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 350.1
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 350.0
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 347.6
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 347.3
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 345.9
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 345.5
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 345.1
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 344.1
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 343.3
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 343.1
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 342.4
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 341.1
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 341.1
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 339.8
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 339.6
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 338.3
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 336.1
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 335.6
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 334.9
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 334.9
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 334.4
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 332.5
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 331.1
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 330.9
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 330.8
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 330.7
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 329.0
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 328.2
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 328.0
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 325.2
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 325.2
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 325.1
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 324.4
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 324.0
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 323.3
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 322.6
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 320.5
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 319.8
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 318.6
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 317.6
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 315.9
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 315.6
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 315.2
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 315.0
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 315.0
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 314.0
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 313.7
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 313.6
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 313.1
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 312.4
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 311.5
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 309.5
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 308.8
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 308.5
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 308.1
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 305.9
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 305.8
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 305.2
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 305.2
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 304.9
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 304.4
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 303.5
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 302.9
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 302.8
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 302.6
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 301.8
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 301.1
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 299.3
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 297.7
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 297.6
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 297.4
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 297.3
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 296.5
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 296.4
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 295.5
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 295.1
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 294.4
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 293.4
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 293.1
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 293.1
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 292.3
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 292.2
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 291.9
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 291.4
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 291.2
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 289.6
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 288.3
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 287.9
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 287.0
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 286.9
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 285.8
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 285.2
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 283.5
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 281.3
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 281.0
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 280.9
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 279.2
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 275.5
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 275.0
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 273.9
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 273.8
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 273.3
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 272.9
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 272.3
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 270.8
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 269.4
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 268.2
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 267.8
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 266.6
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 265.2
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 264.2
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 261.9
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 260.5
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 260.1
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 259.3
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 259.0
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 258.3
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 256.2
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 254.8
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 253.7
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 252.3
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 251.1
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 250.7
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 249.8
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 249.8
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 249.1
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 248.7
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 248.7
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 248.0
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 246.8
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 245.9
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 245.7
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 245.2
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 244.1
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 240.9
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 240.7
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 240.2
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 236.8
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 235.6
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 235.5
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 234.8
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 233.8
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 231.9
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 229.4
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 228.6
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 227.3
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 227.0
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 226.8
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 225.7
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 225.4
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 225.2
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 224.1
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 224.0
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 223.2
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 222.9
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 220.7
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 217.2
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 216.8
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 212.0
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 208.9
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 203.6
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 201.9
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 199.7
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 199.6
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 199.0
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 198.0
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 195.8
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 189.4
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 183.2
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 180.7
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 177.6
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 164.4
Show allShow less
Brain - Putamen (basal ganglia)
Average nTPM: 320.8
Samples: 205

Max nTPM: 547.2
Min nTPM: 181.9
Std nTPM: 78.4
Median nTPM: 304.5
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 547.2
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 521.9
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 516.1
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 505.5
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 503.3
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 495.1
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 489.5
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 489.4
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 486.5
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 480.8
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 478.7
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 472.3
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 468.8
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 468.2
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 462.7
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 455.2
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 448.8
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 447.4
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 438.9
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 430.9
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 430.2
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 429.1
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 428.7
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 428.1
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 423.6
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 420.8
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 416.0
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 412.6
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 412.4
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 411.1
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 410.5
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 409.1
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 403.9
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 401.3
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 400.7
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 400.0
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 397.4
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 390.5
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 389.9
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 389.4
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 385.6
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 384.0
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 380.2
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 377.5
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 377.4
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 377.0
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 375.7
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 372.9
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 372.7
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 368.8
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 368.1
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 367.8
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 367.4
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 367.2
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 366.8
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 365.2
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 364.7
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 360.2
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 359.9
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 359.9
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 357.4
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 356.9
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 355.7
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 353.9
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 353.5
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 353.2
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 352.0
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 351.6
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 347.4
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 344.6
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 343.9
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 342.4
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 341.2
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 338.9
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 338.0
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 337.3
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 336.9
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 335.5
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 334.4
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 334.1
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 333.8
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 333.5
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 332.3
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 332.1
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 328.5
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 327.2
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 327.0
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 324.5
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 323.0
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 322.0
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 319.1
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 318.1
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 317.7
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 317.4
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 317.3
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 316.2
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 316.1
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 314.0
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 313.3
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 313.2
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 312.8
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 307.3
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 304.5
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 303.0
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 302.8
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 301.1
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 299.8
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 298.9
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 298.8
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 298.8
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 298.7
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 298.1
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 297.3
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 297.2
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 294.8
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 293.1
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 292.7
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 292.7
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 292.5
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 292.4
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 289.4
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 287.4
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 286.1
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 285.6
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 285.6
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 284.5
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 283.8
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 280.7
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 280.4
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 279.7
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 279.5
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 279.4
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 278.0
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 277.1
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 276.1
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 275.4
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 275.4
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 274.6
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 272.9
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 272.8
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 271.2
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 270.7
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 269.9
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 269.7
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 269.6
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 269.5
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 268.9
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 265.4
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 265.3
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 265.0
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 263.3
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 262.8
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 262.2
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 261.9
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 261.7
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 261.1
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 259.7
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 259.6
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 259.3
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 259.0
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 256.5
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 255.8
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 255.4
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 254.9
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 251.2
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 250.9
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 250.6
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 249.2
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 249.0
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 247.3
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 246.7
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 246.7
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 245.9
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 244.9
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 243.8
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 243.4
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 240.9
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 237.2
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 237.0
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 235.9
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 234.9
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 234.5
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 233.0
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 231.2
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 228.6
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 224.2
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 221.8
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 221.5
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 221.5
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 221.1
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 221.1
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 220.1
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 217.8
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 216.6
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 212.2
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 212.0
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 211.7
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 203.3
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 201.8
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 201.3
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 199.0
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 196.8
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 193.3
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 188.1
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 181.9
Show allShow less

BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

249.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 172.5
FF:10164-103B2 76 years, female 172.5
Nucleus accumbens
Scaled Tags Per Million: 204.5
FF:10037-101F1 23-56 years, mixed 204.5
Putamen
Scaled Tags Per Million: 249.4
FF:10176-103C5 60 years, female 249.4
Globus pallidus
Scaled Tags Per Million: 168.8
FF:10175-103C4 60 years, female 216.5
FF:10161-103A8 76 years, female 121.1

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

7.4
Pig sample Sample description nTPM
Caudate
nTPM: 7.4
Samples: 4

Max nTPM: 8.1
Min nTPM: 6.7
Sample A Female 7.9
Sample B Female 8.1
Sample C Male 6.7
Sample D Male 6.7
Putamen
nTPM: 5.4
Samples: 4

Max nTPM: 7.7
Min nTPM: 3.5
Sample A Female 5.6
Sample B Female 7.7
Sample C Male 3.5
Sample D Male 4.7
Septum
nTPM: 6.7
Samples: 4

Max nTPM: 7.8
Min nTPM: 6.2
Sample A Female 6.6
Sample B Female 6.2
Sample C Male 6.2
Sample D Male 7.8
Ventral pallidum
nTPM: 6.6
Samples: 4

Max nTPM: 8.2
Min nTPM: 5.1
Sample A Female 7.2
Sample B Female 5.1
Sample C Male 6.0
Sample D Male 8.2

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

988.0
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 934.3
Samples: 4

Max nTPM: 989.2
Min nTPM: 874.8
Sample A Male 939.7
Sample B Male 874.8
Sample C Female 933.6
Sample D Female 989.2
Septum
nTPM: 988.1
Samples: 4

Max nTPM: 1132.2
Min nTPM: 839.8
Sample A Male 839.8
Sample B Male 1132.2
Sample C Female 1090.3
Sample D Female 889.9
Ventral forebrain
nTPM: 919.5
Samples: 4

Max nTPM: 1093.6
Min nTPM: 853.3
Sample A Male 853.3
Sample B Male 866.4
Sample C Female 1093.6
Sample D Female 864.5

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

10.1
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 9.5
67765702 Antisense, RP_040916_01_D05, Mouse strain C57BL/6J (56 days, male) 10.1
77371785 Antisense, RP_070116_01_C02, Mouse strain C57BL/6J (56 days, male) 8.9
Pallidum
Expression energy: 10.1
67765702 Antisense, RP_040916_01_D05, Mouse strain C57BL/6J (56 days, male) 10.7
77371785 Antisense, RP_070116_01_C02, Mouse strain C57BL/6J (56 days, male) 9.5

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