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BRAIN MEDULLA OBLONGATA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
Brain proteome
Medulla oblongata
MEDULLA OBLONGATA - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
HPA Brain:41155.7 nTPM
Pig:26480.9 nTPM

MEDULLA OBLONGATA - Annotated protein expression
Pending normal tissue analysis

MEDULLA OBLONGATA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

41155.7
Sample id Sample description nTPM
Area postrema
nTPM: 33891.6
2799 Male, age 61, both hemispheres 39016.7
2306 Male, age 80, both hemispheres 37079.1
2054 Male, age 76, both hemispheres 25579.0
Dorsal medullary reticular nucleus
nTPM: 21472.7
2088 Male, age 76, both hemispheres 25692.8
2373 Male, age 61, both hemispheres 25451.8
2040 Female, age 85, both hemispheres 13273.4
Dorsal motor vagal complex
nTPM: 35276.8
2807 Female, age 85, both hemispheres 58332.4
2797 Male, age 61, both hemispheres 57377.5
2185 Male, age 76, both hemispheres 43418.5
2643 Male, age 74, both hemispheres 41499.0
2813 Female, age 72, unknown 38000.3
2133 Female, age 91, both hemispheres 16010.8
2000 Male, age 74, unknown 13912.8
2844 Male, age 55, unknown 13663.2
Gigantocellular reticular nuclei, medullary
nTPM: 24293.6
2387 Female, age 91, both hemispheres 43587.0
2310 Male, age 80, both hemispheres 29157.7
2314 Male, age 61, both hemispheres 27721.1
2022 Male, age 76, right hemisphere 17355.7
2462 Male, age 74, both hemispheres 16294.3
1876 Female, age 85, both hemispheres 11645.8
Gigantocellular reticular nuclei, pars
nTPM: 38756.5
2706 Male, age 80, both hemispheres 66920.6
2330 Male, age 80, both hemispheres 62044.3
2336 Male, age 61, both hemispheres 26509.5
2168 Male, age 76, both hemispheres 19507.6
2084 Female, age 85, both hemispheres 18800.7
Inferior olive
nTPM: 35083.4
2628 Female, age 91, both hemispheres 76592.3
2379 Male, age 80, both hemispheres 45160.6
2178 Male, age 61, both hemispheres 21725.8
2085 Female, age 85, both hemispheres 19625.5
2563 Male, age 74, both hemispheres 12312.7
Lateral medullary reticular nucleus
nTPM: 21581.7
2374 Male, age 61, both hemispheres 43183.4
2804 Female, age 91, both hemispheres 29846.1
2190 Female, age 85, both hemispheres 25354.2
2044 Male, age 76, both hemispheres 17528.7
2852 Male, age 80, both hemispheres 7893.8
2305 Male, age 74, both hemispheres 5684.1
Medial olivary nucleus
nTPM: 17808.8
2851 Male, age 80, both hemispheres 45547.1
2138 Female, age 91, both hemispheres 10793.7
1962 Male, age 76, both hemispheres 9297.8
1943 Male, age 61, both hemispheres 5596.7
Medial vestibular nucleus
nTPM: 28480.8
2624 Male, age 61, both hemispheres 60312.9
2803 Female, age 91, both hemispheres 30353.0
2801 Male, age 74, both hemispheres 25762.0
2134 Male, age 76, both hemispheres 23816.3
2093 Male, age 80, both hemispheres 18646.4
2743 Female, age 85, both hemispheres 11994.1
Motor hypoglossal nucleus
nTPM: 28029.5
2461 Male, age 61, both hemispheres 64797.1
2182 Male, age 80, both hemispheres 27887.1
2132 Female, age 85, both hemispheres 25421.3
2125 Female, age 91, both hemispheres 13198.2
2277 Male, age 76, both hemispheres 8843.7
Nucleus ambiguus
nTPM: 5873.6
2071 Male, age 76, both hemispheres 6940.1
2096 Female, age 85, both hemispheres 4807.0
Nucleus cuneatus
nTPM: 41155.7
2805 Female, age 91, both hemispheres 82413.7
2381 Male, age 80, both hemispheres 50499.8
2808 Female, age 85, both hemispheres 47502.3
2380 Male, age 80, both hemispheres 42658.0
2131 Male, age 76, both hemispheres 37554.8
2562 Male, age 61, both hemispheres 34185.4
2100 Male, age 76, both hemispheres 31180.9
2376 Male, age 61, both hemispheres 24066.6
2564 Male, age 74, both hemispheres 20339.8
Nucleus gracilis
nTPM: 38755.9
2382 Male, age 80, both hemispheres 51213.2
2299 Female, age 85, both hemispheres 39968.6
2627 Male, age 74, both hemispheres 25086.1
Nucleus raphe obscurus
nTPM: 13579.7
2845 Female, age 85, midline 18541.4
2800 Male, age 61, midline 15707.2
2142 Male, age 76, midline 6490.4
Nucleus raphe pallidus
nTPM: 10235.3
2183 Male, age 80, midline 18592.8
2145 Male, age 76, midline 6927.9
1924 Male, age 61, midline 5185.2
Nucleus tractus solitarii
nTPM: 23845.7
2191 Female, age 85, both hemispheres 37338.9
2307 Male, age 80, both hemispheres 28237.5
2656 Male, age 76, both hemispheres 19950.3
2144 Female, age 91, right hemisphere 9856.2
Parvicellular reticular nuclei
nTPM: 18618.6
2558 Male, age 74, both hemispheres 22681.6
2095 Male, age 76, both hemispheres 20870.5
2119 Male, age 80, both hemispheres 12303.7
Parvicellular reticular nuclei, medullary
nTPM: 24037.6
2181 Male, age 80, left hemisphere 30964.7
2189 Female, age 91, both hemispheres 21344.4
2091 Female, age 85, both hemispheres 19803.7
Peritrigeminal nucleus
nTPM: 13534.6
2136 Male, age 76, both hemispheres 19191.6
2179 Male, age 61, both hemispheres 13013.7
2067 Female, age 85, both hemispheres 8398.6
Prepositus hypoglossal nucleus
nTPM: 22125.9
2855 Female, age 85, right hemisphere 27302.7
2086 Male, age 80, both hemispheres 16949.0
Spinal trigeminal nucleus, caudal
nTPM: 29077.4
2390 Female, age 91, both hemispheres 46222.2
2308 Male, age 80, both hemispheres 28400.4
2447 Male, age 76, both hemispheres 26643.1
2642 Male, age 74, both hemispheres 26492.1
2312 Male, age 61, both hemispheres 17629.1
Spinal trigeminal nucleus, interpolar
nTPM: 26521.4
2625 Male, age 61, both hemispheres 47646.2
2389 Female, age 91, both hemispheres 41502.2
2386 Female, age 85, both hemispheres 15361.8
2066 Male, age 76, right hemisphere 14328.0
2033 Male, age 80, both hemispheres 13768.8
Spinal vestibular nucleus
nTPM: 23560.5
2796 Male, age 61, both hemispheres 42663.3
2806 Female, age 85, both hemispheres 30191.2
2186 Female, age 91, both hemispheres 21544.1
2384 Male, age 74, both hemispheres 18330.1
2748 Male, age 76, both hemispheres 14442.4
2780 Male, age 80, both hemispheres 14191.7
Superior vestibular nucleus
nTPM: 13478.9
2061 Male, age 76, both hemispheres 15133.8
2015 Male, age 80, both hemispheres 12846.2
2383 Male, age 74, both hemispheres 12456.9
Ventral medullary reticular nucleus
nTPM: 22286.9
2372 Male, age 61, both hemispheres 27776.6
2060 Male, age 76, both hemispheres 16797.2
Ventrolateral medulla, A1-C1 cell groups
nTPM: 17479.7
2302 Female, age 91, both hemispheres 23434.0
2180 Male, age 61, both hemispheres 22803.2
2118 Male, age 80, both hemispheres 14833.5
1986 Male, age 76, both hemispheres 14481.0
2741 Female, age 85, both hemispheres 11846.7

MEDULLA OBLONGATA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

26480.9
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 26480.9
Samples: 4

Max nTPM: 31146.2
Min nTPM: 21968.9
Sample A Female 31146.2
Sample B Female 29055.1
Sample C Male 23753.3
Sample D Male 21968.9

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