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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
35116.2
nTPM
Pig:
33443.7
nTPM
PONS - Annotated protein expression
Pending normal tissue analysis
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
35116.2
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 24482.5
2301
Female, age 85, both hemispheres
36652.0
2188
Female, age 91, both hemispheres
26760.5
1984
Male, age 76, both hemispheres
19795.0
2090
Male, age 80, both hemispheres
14722.6
Dorsal cochlear nucleus nTPM: 28362.3
2378
Male, age 80, both hemispheres
50508.5
2802
Male, age 74, right hemisphere
25032.2
2187
Female, age 91, both hemispheres
23562.7
2370
Male, age 61, both hemispheres
22198.5
2058
Male, age 76, both hemispheres
20509.8
Dorsal tegmental nucleus nTPM: 24745.8
2358
Male, age 61, both hemispheres
46960.1
1936
Male, age 76, left hemisphere
20775.1
2083
Male, age 80, both hemispheres
18683.9
2326
Male, age 74, both hemispheres
12564.0
Dorsolateral tegmental area nTPM: 16946.8
2141
Male, age 76, both hemispheres
25443.9
2337
Male, age 61, both hemispheres
19170.5
2654
Male, age 80, both hemispheres
19149.3
2751
Female, age 85, both hemispheres
11354.5
2360
Male, age 74, both hemispheres
9615.8
Kolliker-Fuse nucleus nTPM: 28815.1
2793
Female, age 91, left hemisphere
53980.9
2163
Male, age 80, both hemispheres
24704.8
2315
Male, age 76, right hemisphere
7759.6
Lateral lemniscal nuclei nTPM: 21354.2
2453
Male, age 74, right hemisphere
31560.6
2320
Female, age 91, left hemisphere
28395.1
2169
Male, age 76, both hemispheres
26144.0
2036
Male, age 80, both hemispheres
13451.2
2746
Female, age 85, left hemisphere
7220.3
Lateral parabrachial nucleus nTPM: 15202.3
2792
Male, age 76, both hemispheres
21316.8
2790
Male, age 61, both hemispheres
18943.5
2139
Female, age 85, right hemisphere
11251.0
2013
Male, age 80, both hemispheres
9297.8
Lateral vestibular nucleus nTPM: 35116.2
2184
Male, age 76, both hemispheres
43939.2
2311
Male, age 80, both hemispheres
26293.2
Locus coeruleus nTPM: 23694.7
2720
Male, age 74, both hemispheres
58344.6
2162
Male, age 80, both hemispheres
28507.2
2788
Male, age 74, unknown
24309.5
1980
Male, age 76, both hemispheres
15890.9
2014
Male, age 55, unknown
14512.7
2317
Female, age 72, unknown
13923.7
2123
Female, age 91, both hemispheres
10374.1
Medial parabrachial nucleus nTPM: 21920.3
2854
Male, age 80, both hemispheres
43115.1
2786
Male, age 76, both hemispheres
25938.0
2156
Male, age 61, both hemispheres
21447.3
2170
Female, age 91, both hemispheres
14692.2
2463
Female, age 85, right hemisphere
4409.1
Medial periolivary nuclei nTPM: 19787.0
2458
Female, age 91, both hemispheres
41224.7
2171
Female, age 85, both hemispheres
24500.7
2063
Male, age 76, both hemispheres
12825.8
2081
Male, age 80, both hemispheres
12110.3
2791
Male, age 74, right hemisphere
8273.7
Motor facial nucleus nTPM: 34198.7
2697
Female, age 85, both hemispheres
70332.0
2795
Female, age 91, both hemispheres
58443.3
2327
Male, age 80, both hemispheres
37790.3
2365
Male, age 74, right hemisphere
15517.7
2062
Male, age 76, both hemispheres
12116.4
2126
Male, age 61, both hemispheres
10992.5
Motor trigeminal nucleus nTPM: 21454.9
2321
Female, age 91, both hemispheres
32377.7
2309
Male, age 76, both hemispheres
20145.0
2560
Male, age 74, both hemispheres
19767.5
2335
Male, age 61, both hemispheres
19504.2
2079
Male, age 80, both hemispheres
15479.8
Nuclei of the trapezoid body nTPM: 21417.2
2368
Female, age 91, both hemispheres
39029.0
2166
Male, age 80, both hemispheres
26869.0
1983
Male, age 76, both hemispheres
15667.7
2159
Male, age 61, both hemispheres
13359.0
2735
Female, age 85, both hemispheres
12161.2
Nucleus raphe magnus nTPM: 25746.7
2459
Female, age 91, both hemispheres
36350.6
2172
Female, age 85, both hemispheres
34621.8
2328
Male, age 80, both hemispheres
31513.2
2051
Male, age 76, both hemispheres
19803.3
2455
Male, age 74, both hemispheres
18614.7
2160
Male, age 61, both hemispheres
13576.5
Paramedian reticular nucleus nTPM: 17498.7
2052
Male, age 76, both hemispheres
21819.6
2313
Male, age 61, both hemispheres
20401.7
2050
Female, age 85, both hemispheres
17286.6
2057
Male, age 80, both hemispheres
10486.7
Pedunculopontine tegmental nucleus nTPM: 23199.5
2338
Male, age 61, both hemispheres
32580.4
2334
Male, age 80, both hemispheres
24808.0
1921
Female, age 85, both hemispheres
12210.2
Pontine nuclei nTPM: 13771.4
2787
Female, age 85, both hemispheres
22591.5
2319
Female, age 91, both hemispheres
21786.5
2115
Male, age 80, left hemisphere
14801.0
2454
Male, age 74, left hemisphere
13814.3
1863
Male, age 55, unknown
12758.9
1968
Male, age 76, left hemisphere
11394.9
2109
Female, age 72, unknown
7173.5
2727
Male, age 61, right hemisphere
5850.4
Pontine raphe nucleus nTPM: 17956.2
2853
Male, age 76, midline
21317.6
2122
Female, age 85, midline
14594.8
Posteroventral cochlear nucleus nTPM: 17689.8
2341
Male, age 80, both hemispheres
27374.8
2371
Male, age 61, both hemispheres
25778.1
2752
Female, age 85, both hemispheres
13701.6
2135
Female, age 91, both hemispheres
11388.5
2070
Male, age 76, both hemispheres
10205.8
Principal sensory trigeminal nucleus nTPM: 26936.0
2324
Male, age 76, both hemispheres
44262.1
2367
Female, age 91, left hemisphere
38502.7
2158
Male, age 61, both hemispheres
13347.4
2008
Male, age 80, left hemisphere
11632.0
Reticular pontine nucleus, caudal nTPM: 26566.9
2457
Female, age 91, both hemispheres
38961.4
2332
Male, age 80, right hemisphere
37041.7
2559
Male, age 74, both hemispheres
16196.9
2092
Male, age 76, both hemispheres
14067.5
Reticular pontine nucleus, oral nTPM: 24583.9
2366
Female, age 91, both hemispheres
57758.7
2167
Male, age 76, both hemispheres
30107.3
1939
Male, age 80, both hemispheres
13860.1
2361
Male, age 74, both hemispheres
10830.7
2012
Female, age 85, both hemispheres
10362.7
Reticulotegmental nucleus nTPM: 33061.8
2322
Female, age 91, both hemispheres
40682.0
2333
Male, age 80, both hemispheres
35279.2
2325
Male, age 76, both hemispheres
31910.6
2452
Male, age 74, both hemispheres
24375.3
Spinal trigeminal nucleus, oral nTPM: 26828.2
2164
Male, age 80, both hemispheres
48099.0
1978
Male, age 76, both hemispheres
19802.0
2737
Female, age 85, both hemispheres
12583.6
Subcoeruleus area nTPM: 16848.3
1958
Male, age 80, both hemispheres
20437.9
2451
Male, age 74, both hemispheres
19418.4
2323
Female, age 91, left hemisphere
17864.8
2089
Male, age 76, left hemisphere
15153.3
2369
Female, age 85, left hemisphere
11367.0
Superior olive nTPM: 22193.4
2561
Female, age 91, both hemispheres
45704.4
2329
Male, age 80, right hemisphere
33321.9
2020
Male, age 76, both hemispheres
12549.6
1875
Female, age 85, both hemispheres
10503.1
2364
Male, age 74, right hemisphere
8887.9
Ventral periolivary nuclei nTPM: 22069.9
2794
Female, age 91, left hemisphere
37005.3
2165
Male, age 80, both hemispheres
29806.8
2130
Female, age 85, both hemispheres
13430.3
2023
Male, age 76, both hemispheres
8037.1
Ventrolateral tegmental area, A5 NE cell group nTPM: 31874.8
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
The Human Protein Atlas project is funded
