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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:3023.2 nTPM
HPA Brain:2995.1 nTPM
GTEx:3023.2 nTPM
FANTOM5:5137.7 Scaled Tags Per Million
Mouse:4271.5 nTPM
Allen mouse:8.9 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA004938Antibody HPA067456Antibody CAB009916
Glial cells HighHighNot detected
Neuronal cells MediumMediumNot detected






BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

2995.1
Sample id Sample description nTPM
Caudate nucleus
nTPM: 1697.7
2481 Female, age 94, left hemisphere 2357.0
2288 Male, age 75, left hemisphere 2214.5
2290 Female, age 72, unknown 1748.2
2289 Male, age 61, right hemisphere 1610.5
1857 Female, age 85, left hemisphere 1528.8
1854 Male, age 80, left hemisphere 1470.5
2846 Female, age 79, unknown 1427.9
1781 Male, age 74, unknown 1224.5
Globus pallidus, externus
nTPM: 2995.1
1996 Male, age 80, right hemisphere 4226.0
2646 Male, age 61, right hemisphere 3510.1
2772 Female, age 79, unknown 3028.7
2395 Male, age 75, both hemispheres 2276.2
2567 Female, age 72, unknown 1934.4
Globus pallidus, internus
nTPM: 2980.6
2037 Male, age 80, right hemisphere 3405.9
2287 Male, age 75, right hemisphere 3329.3
2111 Female, age 85, right hemisphere 3295.5
2483 Female, age 94, right hemisphere 3080.3
2778 Female, age 91, both hemispheres 2807.5
1818 Male, age 74, unknown 2601.6
2566 Female, age 72, unknown 2344.1
Nucleus accumbens
nTPM: 1530.6
2286 Male, age 75, left hemisphere 2027.2
2391 Female, age 94, left hemisphere 2020.6
2698 Female, age 72, unknown 1819.9
1806 Female, age 85, left hemisphere 1726.1
2732 Male, age 80, right hemisphere 1678.9
1783 Male, age 74, unknown 1174.5
1856 Female, age 91, right hemisphere 967.7
2824 Male, age 61, right hemisphere 830.0
Nucleus basalis of Meynert
nTPM: 2007.4
2569 Male, age 61, both hemispheres 3189.5
2821 Male, age 75, both hemispheres 1852.2
2484 Female, age 94, left hemisphere 1746.7
2393 Male, age 80, right hemisphere 1241.2
Nucleus of the diagonal band
nTPM: 927.7
1812 Female, age 91, both hemispheres 1268.8
1979 Male, age 74, unknown 913.9
2195 Female, age 85, both hemispheres 880.5
2775 Male, age 80, right hemisphere 815.2
2029 Male, age 61, right hemisphere 760.4
Putamen
nTPM: 1436.2
2482 Female, age 94, left hemisphere 2004.4
2489 Female, age 72, unknown 1576.4
2647 Male, age 75, left hemisphere 1441.6
1829 Male, age 74, unknown 1424.5
2466 Female, age 79, unknown 1351.1
1937 Female, age 91, right hemisphere 1159.9
1838 Male, age 80, right hemisphere 1095.5
Septal nuclei
nTPM: 1128.9
2059 Female, age 85, both hemispheres 1502.3
2394 Male, age 61, left hemisphere 1444.1
2199 Male, age 80, right hemisphere 1208.5
2629 Female, age 94, right hemisphere 1128.4
2031 Female, age 72, unknown 1008.0
2009 Female, age 91, both hemispheres 892.5
1960 Male, age 74, unknown 718.2
Stria terminalis, bed nucleus
nTPM: 949.8
2201 Male, age 74, unknown 1021.7
1974 Female, age 91, both hemispheres 1019.7
2486 Female, age 94, both hemispheres 807.9

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

3023.2
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 2362.0
Samples: 246

Max nTPM: 6417.1
Min nTPM: 379.3
Std nTPM: 1029.3
Median nTPM: 2142.9
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 6417.1
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 5604.2
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 5487.9
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 5227.5
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 5165.1
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 4987.5
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 4977.3
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 4833.9
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 4827.6
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 4693.1
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 4591.9
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 4564.7
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 4486.8
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 4306.8
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 4279.3
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 4114.7
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 3998.8
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 3986.9
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 3965.8
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 3931.4
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 3876.8
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 3789.3
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 3786.9
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 3726.2
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 3694.2
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 3693.1
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 3678.0
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 3631.9
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 3623.4
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 3586.2
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 3549.2
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 3529.9
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 3517.1
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 3461.7
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 3454.6
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 3359.3
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 3358.9
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 3346.7
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 3334.4
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 3323.0
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 3281.5
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 3277.5
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 3264.2
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 3244.7
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 3196.1
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 3183.0
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 3180.5
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 3174.8
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 3170.3
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 3160.7
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 3146.4
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 3136.6
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 3093.8
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 3089.7
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 3069.6
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 3043.3
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 3035.7
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 3030.6
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 3028.9
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 3024.7
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 3018.2
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 3009.8
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 2999.2
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 2963.5
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 2944.1
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 2931.9
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 2905.2
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 2893.2
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 2889.8
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 2873.5
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 2825.5
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 2802.2
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 2793.0
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 2792.6
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 2763.5
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 2760.7
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 2752.1
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 2733.3
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 2724.7
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 2701.2
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 2699.4
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 2673.2
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 2640.7
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 2637.8
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 2611.7
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 2541.3
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 2525.9
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 2503.8
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 2480.8
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 2471.5
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 2456.4
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 2440.0
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 2418.4
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 2405.0
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 2401.8
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 2389.0
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 2374.1
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 2363.4
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 2347.3
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 2330.6
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 2325.2
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 2322.7
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 2319.6
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 2319.0
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 2313.6
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 2301.0
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 2300.3
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 2297.2
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 2289.4
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 2283.8
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 2247.4
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 2247.1
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 2232.2
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 2226.9
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 2226.1
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 2213.4
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 2187.6
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 2183.1
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 2182.3
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 2172.6
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 2158.3
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 2157.4
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 2143.9
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 2141.8
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 2138.6
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 2125.9
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 2125.8
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 2116.3
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 2095.5
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 2095.0
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 2091.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 2068.0
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 2067.1
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 2060.9
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 2032.5
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 2029.5
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 2015.5
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 2008.9
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 1999.6
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 1993.9
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 1991.0
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 1980.4
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 1973.9
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 1965.4
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 1961.4
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 1960.6
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 1955.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 1944.6
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 1940.2
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 1936.0
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 1931.2
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 1926.1
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 1920.7
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 1904.5
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 1887.2
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 1869.0
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 1860.1
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 1841.8
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 1815.8
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 1814.1
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 1805.9
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 1805.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 1803.0
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 1800.1
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 1794.6
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 1793.6
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 1771.6
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 1756.4
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 1728.0
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 1719.4
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 1718.4
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 1711.8
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 1707.7
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 1705.1
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 1703.0
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 1703.0
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 1699.7
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 1696.1
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 1695.9
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 1681.8
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 1680.1
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 1679.5
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 1670.1
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 1660.5
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 1656.6
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 1654.7
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 1653.3
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 1618.9
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 1608.0
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 1583.1
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 1577.6
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 1575.8
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 1548.5
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 1539.1
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 1525.8
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 1523.8
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 1519.6
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 1514.0
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 1510.2
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 1507.5
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 1498.3
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 1473.4
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 1449.1
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 1442.6
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 1408.5
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 1405.7
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 1382.1
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 1381.7
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 1369.6
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 1349.7
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 1347.1
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 1345.1
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 1337.5
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 1325.3
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 1320.5
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 1318.8
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 1291.0
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 1275.1
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 1261.5
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 1259.3
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 1241.4
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 1235.7
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 1228.9
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 1220.8
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 1220.6
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 1208.3
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 1205.3
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 1189.9
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 1176.0
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 1139.7
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 1134.7
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 1123.7
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 1093.1
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 1061.8
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 1050.1
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 1047.5
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 1041.2
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 995.1
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 966.8
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 905.8
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 899.8
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 899.1
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 878.9
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 627.2
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 394.9
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 379.3
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 2046.3
Samples: 246

Max nTPM: 9428.0
Min nTPM: 507.0
Std nTPM: 1212.0
Median nTPM: 1703.8
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 9428.0
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 8135.6
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 7876.3
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 5335.9
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 5129.9
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 5073.7
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 4657.3
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 4521.4
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 4508.2
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 4417.8
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 4244.7
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 4235.4
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 4169.5
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 4158.2
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 4000.0
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 3954.6
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 3911.8
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 3886.1
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 3794.8
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 3780.3
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 3713.9
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 3654.8
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 3651.0
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 3618.8
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 3579.7
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 3538.3
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 3472.3
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 3469.6
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 3453.1
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 3398.3
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 3377.1
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 3372.8
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 3277.6
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 3202.5
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 3197.4
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 3148.2
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 3079.1
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 3073.2
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 3041.8
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 3023.4
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 3017.7
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 2978.8
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 2860.2
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 2846.7
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 2833.3
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 2827.4
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 2809.2
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 2793.8
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 2762.7
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 2757.7
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 2698.1
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 2695.9
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 2695.4
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 2686.1
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 2670.0
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 2663.0
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 2661.2
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 2641.8
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 2631.9
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 2609.2
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 2605.0
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 2603.3
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 2571.0
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 2565.3
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 2526.0
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 2484.7
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 2483.0
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 2449.7
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 2445.3
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 2429.2
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 2373.9
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 2336.6
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 2335.6
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 2304.7
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 2276.2
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 2240.3
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 2222.0
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 2209.4
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 2181.4
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 2177.6
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 2156.7
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 2137.0
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 2133.7
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 2126.9
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 2112.1
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 2109.9
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 2096.4
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 2096.4
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 2085.7
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 2080.4
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 2041.1
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 2029.9
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 2017.8
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 2010.7
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 1995.8
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 1979.3
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 1978.0
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 1956.3
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 1954.5
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 1950.0
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 1945.5
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 1945.4
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 1935.4
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 1919.5
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 1895.7
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 1867.7
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 1865.0
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 1842.1
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 1830.8
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 1830.0
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 1829.2
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 1829.0
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 1824.3
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 1808.0
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 1773.0
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 1770.5
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 1747.5
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 1735.8
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 1734.8
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 1723.1
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 1716.7
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 1712.6
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 1708.7
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 1698.9
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 1691.8
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 1678.5
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 1678.5
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 1647.7
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 1639.5
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 1636.5
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 1625.4
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 1612.4
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 1603.0
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 1601.2
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 1581.8
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 1578.5
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 1568.6
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 1567.6
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 1566.7
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 1547.3
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 1546.9
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 1520.6
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 1508.4
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 1504.4
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 1503.4
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 1497.7
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 1492.7
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 1485.0
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 1483.5
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 1482.7
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 1473.9
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 1469.9
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 1467.0
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 1453.8
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 1447.7
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 1432.4
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 1431.8
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 1426.2
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 1422.7
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 1421.1
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 1400.9
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 1396.2
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 1391.9
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 1390.6
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 1386.0
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 1362.8
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 1360.1
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 1358.3
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 1358.2
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 1353.8
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 1348.5
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 1340.9
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 1339.2
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 1336.5
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 1331.9
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 1326.0
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 1320.0
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 1314.4
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 1313.8
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 1309.1
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 1306.1
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 1303.8
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 1302.5
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 1294.7
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 1294.0
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 1281.8
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 1257.6
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 1248.6
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 1233.8
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 1229.3
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 1226.4
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 1210.2
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 1202.1
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 1198.4
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 1168.2
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 1166.9
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 1149.6
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 1147.8
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 1147.6
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 1140.7
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 1137.4
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 1135.1
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 1126.6
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 1125.3
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 1122.8
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 1122.6
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 1116.7
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 1103.5
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 1096.3
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 1095.1
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 1091.5
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 1090.5
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 1087.5
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 1060.9
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 1029.2
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 1028.6
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 1020.9
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 1020.3
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 993.4
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 985.8
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 977.9
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 977.1
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 972.1
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 964.9
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 942.9
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 939.1
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 927.3
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 924.0
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 901.4
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 872.9
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 866.7
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 865.4
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 859.5
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 858.3
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 805.1
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 776.4
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 757.1
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 734.4
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 714.0
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 701.7
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 671.4
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 653.3
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 582.6
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 581.4
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 556.5
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 507.0
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Brain - Putamen (basal ganglia)
Average nTPM: 3023.2
Samples: 205

Max nTPM: 9087.8
Min nTPM: 783.0
Std nTPM: 1293.9
Median nTPM: 2734.6
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 9087.8
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 7299.3
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 6659.4
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 6533.7
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 6115.8
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 6104.6
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 6035.5
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 5980.0
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 5770.4
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 5763.7
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 5666.5
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 5522.9
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 5407.3
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 5389.7
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 5236.7
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 5129.0
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 4953.9
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 4750.6
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 4746.9
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 4743.4
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 4647.8
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 4620.3
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 4612.4
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 4562.1
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 4540.8
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 4514.2
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 4485.7
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 4471.5
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 4406.8
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 4374.1
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 4367.7
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 4331.4
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 4289.3
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 4206.9
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 4203.1
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 4172.8
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 4135.9
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 4113.2
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 4097.7
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 4074.2
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 4014.2
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 3966.0
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 3917.2
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 3870.3
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 3850.4
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 3843.7
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 3818.9
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 3784.8
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 3778.1
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 3764.0
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 3672.8
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 3662.0
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 3601.2
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 3584.4
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 3542.8
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 3515.4
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 3512.8
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 3455.8
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 3452.8
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 3443.9
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 3407.4
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 3379.5
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 3367.0
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 3331.3
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 3304.3
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 3296.6
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 3265.2
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 3262.7
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 3255.8
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 3238.6
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 3237.5
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 3224.7
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 3174.5
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 3173.1
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 3145.7
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 3139.0
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 3128.1
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 3120.5
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 3120.4
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 3097.0
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 3087.4
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 3082.1
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 3077.3
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 3067.9
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 3047.5
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 3047.3
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 3043.4
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 3033.6
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 3026.2
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 3014.9
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 2949.6
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 2948.6
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 2915.0
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 2894.8
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 2844.0
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 2841.4
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 2818.3
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 2811.8
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 2800.5
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 2795.5
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 2784.1
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 2740.8
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 2734.6
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 2732.3
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 2728.9
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 2726.0
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 2718.0
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 2711.3
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 2705.7
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 2698.1
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 2688.4
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 2682.8
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 2677.7
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 2659.6
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 2656.3
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 2618.3
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 2573.3
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 2563.2
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 2549.6
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 2517.3
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 2486.8
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 2478.4
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 2464.2
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 2436.3
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 2430.3
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 2403.9
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 2402.5
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 2375.5
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 2374.5
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 2337.3
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 2335.4
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 2330.1
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 2313.1
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 2305.5
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 2304.9
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 2279.3
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 2278.6
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 2266.6
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 2264.0
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 2247.1
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 2246.0
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 2244.6
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 2232.6
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 2230.4
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 2167.2
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 2164.9
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 2163.3
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 2162.5
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 2162.4
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 2149.8
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 2143.7
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 2143.5
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 2129.0
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 2124.9
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 2124.4
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 2113.1
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 2088.9
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 2084.6
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 2076.2
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 2070.4
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 2051.4
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 2046.1
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 2031.9
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 1973.8
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 1946.2
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 1921.4
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 1918.3
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 1906.4
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 1890.4
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 1880.9
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 1875.9
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 1869.5
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 1853.8
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 1844.1
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 1826.3
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 1823.4
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 1806.4
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 1789.0
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 1784.0
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 1780.1
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 1773.1
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 1769.2
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 1734.9
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 1728.7
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 1714.1
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 1714.0
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 1710.9
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 1697.0
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 1675.1
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 1637.7
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 1621.7
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 1593.4
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 1583.1
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 1576.2
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 1469.8
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 1390.6
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 1356.9
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 1334.2
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 1280.1
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 1212.8
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 1147.2
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 1139.5
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 893.7
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 803.9
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 783.0
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

5137.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 2723.4
FF:10164-103B2 76 years, female 2723.4
Nucleus accumbens
Scaled Tags Per Million: 4541.4
FF:10037-101F1 23-56 years, mixed 4541.4
Putamen
Scaled Tags Per Million: 3254.2
FF:10176-103C5 60 years, female 3254.2
Globus pallidus
Scaled Tags Per Million: 5137.7
FF:10175-103C4 60 years, female 5941.5
FF:10161-103A8 76 years, female 4333.8

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

4271.5
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 602.6
Samples: 4

Max nTPM: 765.6
Min nTPM: 467.7
Sample A Male 765.6
Sample B Male 603.2
Sample C Female 574.0
Sample D Female 467.7
Septum
nTPM: 1131.3
Samples: 4

Max nTPM: 1814.3
Min nTPM: 533.6
Sample A Male 1814.3
Sample B Male 904.2
Sample C Female 1272.9
Sample D Female 533.6
Ventral forebrain
nTPM: 4271.6
Samples: 4

Max nTPM: 6494.9
Min nTPM: 2931.0
Sample A Male 3125.0
Sample B Male 4535.3
Sample C Female 6494.9
Sample D Female 2931.0

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

8.9
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 5.1
851 Antisense, RP_Baylor_102986, Mouse strain C57BL/6J (56 days, male) 5.1
852 Antisense, RP_Baylor_102986, Mouse strain C57BL/6J (56 days, male) 3.8
Pallidum
Expression energy: 8.9
851 Antisense, RP_Baylor_102986, Mouse strain C57BL/6J (56 days, male) 8.9
852 Antisense, RP_Baylor_102986, Mouse strain C57BL/6J (56 days, male) 6.0

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