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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
2427.1
nTPM
FANTOM5:
5577.0
Scaled Tags Per Million
Allen mouse:
9.6
Expression energy
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
2427.1
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 2055.8
2188
Female, age 91, both hemispheres
2239.9
2090
Male, age 80, both hemispheres
2215.2
2301
Female, age 85, both hemispheres
2198.9
1984
Male, age 76, both hemispheres
1569.2
Dorsal cochlear nucleus nTPM: 1873.3
2370
Male, age 61, both hemispheres
2071.6
2058
Male, age 76, both hemispheres
1974.0
2187
Female, age 91, both hemispheres
1929.0
2378
Male, age 80, both hemispheres
1842.6
2802
Male, age 74, right hemisphere
1549.6
Dorsal tegmental nucleus nTPM: 1857.9
2083
Male, age 80, both hemispheres
2393.3
1936
Male, age 76, left hemisphere
1813.2
2326
Male, age 74, both hemispheres
1630.8
2358
Male, age 61, both hemispheres
1594.3
Dorsolateral tegmental area nTPM: 1885.9
2751
Female, age 85, both hemispheres
2396.9
2654
Male, age 80, both hemispheres
2290.1
2337
Male, age 61, both hemispheres
1728.7
2360
Male, age 74, both hemispheres
1519.0
2141
Male, age 76, both hemispheres
1494.8
Kolliker-Fuse nucleus nTPM: 2427.1
2315
Male, age 76, right hemisphere
2966.4
2793
Female, age 91, left hemisphere
2364.5
2163
Male, age 80, both hemispheres
1950.5
Lateral lemniscal nuclei nTPM: 1902.3
2746
Female, age 85, left hemisphere
2252.5
2036
Male, age 80, both hemispheres
2111.6
2320
Female, age 91, left hemisphere
1858.8
2169
Male, age 76, both hemispheres
1722.8
2453
Male, age 74, right hemisphere
1565.7
Lateral parabrachial nucleus nTPM: 2047.0
2792
Male, age 76, both hemispheres
2939.7
2139
Female, age 85, right hemisphere
2196.6
2013
Male, age 80, both hemispheres
2185.5
2790
Male, age 61, both hemispheres
866.0
Lateral vestibular nucleus nTPM: 2105.6
2311
Male, age 80, both hemispheres
2138.4
2184
Male, age 76, both hemispheres
2072.8
Locus coeruleus nTPM: 1289.5
2317
Female, age 72, unknown
1627.0
1980
Male, age 76, both hemispheres
1423.7
2123
Female, age 91, both hemispheres
1397.5
2162
Male, age 80, both hemispheres
1358.4
2014
Male, age 55, unknown
1290.3
2720
Male, age 74, both hemispheres
1015.8
2788
Male, age 74, unknown
914.0
Medial parabrachial nucleus nTPM: 1964.4
2170
Female, age 91, both hemispheres
2308.7
2463
Female, age 85, right hemisphere
2270.4
2854
Male, age 80, both hemispheres
1942.8
2786
Male, age 76, both hemispheres
1932.8
2156
Male, age 61, both hemispheres
1367.5
Medial periolivary nuclei nTPM: 1911.4
2791
Male, age 74, right hemisphere
2269.4
2081
Male, age 80, both hemispheres
2051.5
2063
Male, age 76, both hemispheres
1795.8
2458
Female, age 91, both hemispheres
1779.6
2171
Female, age 85, both hemispheres
1660.9
Motor facial nucleus nTPM: 1900.0
2126
Male, age 61, both hemispheres
2480.8
2365
Male, age 74, right hemisphere
2242.0
2062
Male, age 76, both hemispheres
1859.1
2697
Female, age 85, both hemispheres
1832.1
2795
Female, age 91, both hemispheres
1597.9
2327
Male, age 80, both hemispheres
1388.2
Motor trigeminal nucleus nTPM: 1843.2
2335
Male, age 61, both hemispheres
2234.7
2309
Male, age 76, both hemispheres
1813.6
2079
Male, age 80, both hemispheres
1792.2
2560
Male, age 74, both hemispheres
1770.6
2321
Female, age 91, both hemispheres
1604.7
Nuclei of the trapezoid body nTPM: 1824.8
2159
Male, age 61, both hemispheres
2091.8
1983
Male, age 76, both hemispheres
1938.7
2166
Male, age 80, both hemispheres
1874.3
2368
Female, age 91, both hemispheres
1712.5
2735
Female, age 85, both hemispheres
1506.8
Nucleus raphe magnus nTPM: 1749.1
2051
Male, age 76, both hemispheres
2140.9
2455
Male, age 74, both hemispheres
1981.1
2160
Male, age 61, both hemispheres
1809.2
2328
Male, age 80, both hemispheres
1725.9
2459
Female, age 91, both hemispheres
1639.5
2172
Female, age 85, both hemispheres
1198.2
Paramedian reticular nucleus nTPM: 1777.7
2057
Male, age 80, both hemispheres
2067.0
2050
Female, age 85, both hemispheres
1743.0
2313
Male, age 61, both hemispheres
1695.7
2052
Male, age 76, both hemispheres
1605.3
Pedunculopontine tegmental nucleus nTPM: 1811.3
2334
Male, age 80, both hemispheres
1871.0
1921
Female, age 85, both hemispheres
1831.8
2338
Male, age 61, both hemispheres
1731.2
Pontine nuclei nTPM: 1931.3
2115
Male, age 80, left hemisphere
2164.1
2319
Female, age 91, both hemispheres
2123.1
2454
Male, age 74, left hemisphere
2096.5
1863
Male, age 55, unknown
2028.6
1968
Male, age 76, left hemisphere
1918.8
2727
Male, age 61, right hemisphere
1793.2
2787
Female, age 85, both hemispheres
1728.9
2109
Female, age 72, unknown
1597.1
Pontine raphe nucleus nTPM: 1644.1
2853
Male, age 76, midline
1787.0
2122
Female, age 85, midline
1501.2
Posteroventral cochlear nucleus nTPM: 2149.9
2135
Female, age 91, both hemispheres
2586.0
2341
Male, age 80, both hemispheres
2251.8
2070
Male, age 76, both hemispheres
2144.6
2371
Male, age 61, both hemispheres
2087.1
2752
Female, age 85, both hemispheres
1679.8
Principal sensory trigeminal nucleus nTPM: 1893.1
2324
Male, age 76, both hemispheres
2185.4
2158
Male, age 61, both hemispheres
1932.5
2367
Female, age 91, left hemisphere
1904.4
2008
Male, age 80, left hemisphere
1550.1
Reticular pontine nucleus, caudal nTPM: 1906.9
2092
Male, age 76, both hemispheres
2206.0
2457
Female, age 91, both hemispheres
2035.0
2559
Male, age 74, both hemispheres
1825.8
2332
Male, age 80, right hemisphere
1560.8
Reticular pontine nucleus, oral nTPM: 2103.6
1939
Male, age 80, both hemispheres
2417.1
2366
Female, age 91, both hemispheres
2110.0
2167
Male, age 76, both hemispheres
2099.3
2361
Male, age 74, both hemispheres
1968.5
2012
Female, age 85, both hemispheres
1923.3
Reticulotegmental nucleus nTPM: 1730.2
2333
Male, age 80, both hemispheres
2120.7
2322
Female, age 91, both hemispheres
1779.7
2452
Male, age 74, both hemispheres
1578.7
2325
Male, age 76, both hemispheres
1441.7
Spinal trigeminal nucleus, oral nTPM: 1757.3
1978
Male, age 76, both hemispheres
1882.3
2164
Male, age 80, both hemispheres
1797.1
2737
Female, age 85, both hemispheres
1592.7
Subcoeruleus area nTPM: 1772.2
2369
Female, age 85, left hemisphere
2654.6
1958
Male, age 80, both hemispheres
1749.4
2089
Male, age 76, left hemisphere
1642.6
2323
Female, age 91, left hemisphere
1535.8
2451
Male, age 74, both hemispheres
1278.7
Superior olive nTPM: 1927.6
2364
Male, age 74, right hemisphere
2362.9
2020
Male, age 76, both hemispheres
2145.3
2329
Male, age 80, right hemisphere
1813.3
2561
Female, age 91, both hemispheres
1786.2
1875
Female, age 85, both hemispheres
1530.3
Ventral periolivary nuclei nTPM: 1739.7
2023
Male, age 76, both hemispheres
2130.4
2165
Male, age 80, both hemispheres
1829.9
2130
Female, age 85, both hemispheres
1657.4
2794
Female, age 91, left hemisphere
1340.9
Ventrolateral tegmental area, A5 NE cell group nTPM: 1852.9
2840
Female, age 85, both hemispheres
2065.2
1959
Male, age 76, both hemispheres
1940.3
2456
Female, age 91, both hemispheres
1869.7
2449
Male, age 74, both hemispheres
1846.6
2161
Male, age 80, both hemispheres
1824.2
2359
Male, age 61, both hemispheres
1571.2
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.
The Human Protein Atlas project is funded
