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BRAIN MEDULLA OBLONGATA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Medulla oblongata
MEDULLA OBLONGATA - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
HPA Brain:2947.3 nTPM
FANTOM5:5843.3 Scaled Tags Per Million
Allen mouse:8.9 Expression energy

MEDULLA OBLONGATA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

2947.3
Sample id Sample description nTPM
Area postrema
nTPM: 2382.7
2799 Male, age 61, both hemispheres 2816.9
2306 Male, age 80, both hemispheres 2571.3
2054 Male, age 76, both hemispheres 1759.9
Dorsal medullary reticular nucleus
nTPM: 1956.3
2373 Male, age 61, both hemispheres 2045.8
2040 Female, age 85, both hemispheres 1916.2
2088 Male, age 76, both hemispheres 1906.8
Dorsal motor vagal complex
nTPM: 1703.1
2797 Male, age 61, both hemispheres 2744.6
2185 Male, age 76, both hemispheres 2517.6
2000 Male, age 74, unknown 1607.6
2844 Male, age 55, unknown 1550.0
2813 Female, age 72, unknown 1475.1
2133 Female, age 91, both hemispheres 1342.3
2643 Male, age 74, both hemispheres 1221.2
2807 Female, age 85, both hemispheres 1166.4
Gigantocellular reticular nuclei, medullary
nTPM: 2037.6
2314 Male, age 61, both hemispheres 3226.2
1876 Female, age 85, both hemispheres 2074.9
2387 Female, age 91, both hemispheres 1768.1
2022 Male, age 76, right hemisphere 1764.6
2310 Male, age 80, both hemispheres 1715.0
2462 Male, age 74, both hemispheres 1676.8
Gigantocellular reticular nuclei, pars
nTPM: 1822.2
2336 Male, age 61, both hemispheres 2069.0
2084 Female, age 85, both hemispheres 1846.2
2330 Male, age 80, both hemispheres 1831.8
2706 Male, age 80, both hemispheres 1786.2
2168 Male, age 76, both hemispheres 1577.7
Inferior olive
nTPM: 2605.8
2178 Male, age 61, both hemispheres 3411.3
2563 Male, age 74, both hemispheres 2756.9
2085 Female, age 85, both hemispheres 2694.6
2628 Female, age 91, both hemispheres 2129.5
2379 Male, age 80, both hemispheres 2036.9
Lateral medullary reticular nucleus
nTPM: 2461.5
2374 Male, age 61, both hemispheres 3094.0
2852 Male, age 80, both hemispheres 2837.5
2305 Male, age 74, both hemispheres 2594.7
2190 Female, age 85, both hemispheres 2168.7
2044 Male, age 76, both hemispheres 2103.8
2804 Female, age 91, both hemispheres 1970.2
Medial olivary nucleus
nTPM: 2802.0
1943 Male, age 61, both hemispheres 3700.0
1962 Male, age 76, both hemispheres 2709.1
2138 Female, age 91, both hemispheres 2487.2
2851 Male, age 80, both hemispheres 2311.7
Medial vestibular nucleus
nTPM: 2054.6
2624 Male, age 61, both hemispheres 2988.9
2093 Male, age 80, both hemispheres 2186.4
2801 Male, age 74, both hemispheres 2118.5
2803 Female, age 91, both hemispheres 1966.3
2743 Female, age 85, both hemispheres 1618.0
2134 Male, age 76, both hemispheres 1449.6
Motor hypoglossal nucleus
nTPM: 1764.2
2182 Male, age 80, both hemispheres 2117.4
2125 Female, age 91, both hemispheres 2051.2
2132 Female, age 85, both hemispheres 1739.0
2277 Male, age 76, both hemispheres 1625.4
2461 Male, age 61, both hemispheres 1288.0
Nucleus ambiguus
nTPM: 2605.1
2071 Male, age 76, both hemispheres 3161.0
2096 Female, age 85, both hemispheres 2049.1
Nucleus cuneatus
nTPM: 2005.2
2380 Male, age 80, both hemispheres 2263.1
2100 Male, age 76, both hemispheres 2251.1
2376 Male, age 61, both hemispheres 2231.0
2562 Male, age 61, both hemispheres 2044.7
2808 Female, age 85, both hemispheres 2031.2
2564 Male, age 74, both hemispheres 1977.4
2381 Male, age 80, both hemispheres 1967.6
2131 Male, age 76, both hemispheres 1905.2
2805 Female, age 91, both hemispheres 1375.7
Nucleus gracilis
nTPM: 2081.9
2627 Male, age 74, both hemispheres 2261.9
2382 Male, age 80, both hemispheres 2216.0
2299 Female, age 85, both hemispheres 1767.9
Nucleus raphe obscurus
nTPM: 2708.2
2142 Male, age 76, midline 3005.2
2800 Male, age 61, midline 2769.5
2845 Female, age 85, midline 2350.0
Nucleus raphe pallidus
nTPM: 2947.3
1924 Male, age 61, midline 4235.1
2145 Male, age 76, midline 2611.6
2183 Male, age 80, midline 1995.2
Nucleus tractus solitarii
nTPM: 1135.8
2656 Male, age 76, both hemispheres 1546.1
2191 Female, age 85, both hemispheres 1102.4
2307 Male, age 80, both hemispheres 973.8
2144 Female, age 91, right hemisphere 920.9
Parvicellular reticular nuclei
nTPM: 1833.8
2119 Male, age 80, both hemispheres 2200.9
2095 Male, age 76, both hemispheres 1901.3
2558 Male, age 74, both hemispheres 1399.3
Parvicellular reticular nuclei, medullary
nTPM: 1661.8
2189 Female, age 91, both hemispheres 1752.2
2091 Female, age 85, both hemispheres 1685.6
2181 Male, age 80, left hemisphere 1547.6
Peritrigeminal nucleus
nTPM: 2366.1
2179 Male, age 61, both hemispheres 2416.0
2067 Female, age 85, both hemispheres 2343.7
2136 Male, age 76, both hemispheres 2338.6
Prepositus hypoglossal nucleus
nTPM: 1773.7
2855 Female, age 85, right hemisphere 1909.8
2086 Male, age 80, both hemispheres 1637.6
Spinal trigeminal nucleus, caudal
nTPM: 1955.7
2312 Male, age 61, both hemispheres 2557.7
2447 Male, age 76, both hemispheres 2105.3
2308 Male, age 80, both hemispheres 2094.3
2390 Female, age 91, both hemispheres 1613.1
2642 Male, age 74, both hemispheres 1408.2
Spinal trigeminal nucleus, interpolar
nTPM: 1837.3
2625 Male, age 61, both hemispheres 2441.3
2066 Male, age 76, right hemisphere 1741.5
2033 Male, age 80, both hemispheres 1737.7
2389 Female, age 91, both hemispheres 1693.7
2386 Female, age 85, both hemispheres 1572.5
Spinal vestibular nucleus
nTPM: 1919.5
2748 Male, age 76, both hemispheres 2248.4
2806 Female, age 85, both hemispheres 2092.2
2186 Female, age 91, both hemispheres 1946.7
2780 Male, age 80, both hemispheres 1885.2
2796 Male, age 61, both hemispheres 1869.8
2384 Male, age 74, both hemispheres 1474.9
Superior vestibular nucleus
nTPM: 1999.5
2061 Male, age 76, both hemispheres 2288.3
2015 Male, age 80, both hemispheres 1958.6
2383 Male, age 74, both hemispheres 1751.5
Ventral medullary reticular nucleus
nTPM: 2373.8
2372 Male, age 61, both hemispheres 2656.3
2060 Male, age 76, both hemispheres 2091.3
Ventrolateral medulla, A1-C1 cell groups
nTPM: 2204.0
2180 Male, age 61, both hemispheres 2794.2
1986 Male, age 76, both hemispheres 2209.1
2118 Male, age 80, both hemispheres 2123.9
2302 Female, age 91, both hemispheres 2026.4
2741 Female, age 85, both hemispheres 1866.5

MEDULLA OBLONGATA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

5843.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Medulla oblongata
Scaled Tags Per Million: 5843.3
FF:10038-101F2 18-64 years, mixed 7315.3
FF:10155-103A2 76 years, female 5814.1
FF:10174-103C3 60 years, female 4400.5

MEDULLA OBLONGATA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

8.9
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 8.9
851 Antisense, RP_Baylor_102986, Mouse strain C57BL/6J (56 days, male) 8.9
852 Antisense, RP_Baylor_102986, Mouse strain C57BL/6J (56 days, male) 7.2

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