We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
HNRNPA1
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • HNRNPA1
TISSUE PRIMARY DATA OVARY Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Ovary
Tissue proteome
Ovary
OVARY - Expression summary
Protein expression
Ovaryi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Ovarian stroma cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:1270.7 nTPM
HPA:1200.0 nTPM
GTEx:1270.7 nTPM
FANTOM5:21.4 Scaled Tags Per Million

OVARY - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA001609Antibody HPA001666Antibody CAB010894
Ovarian stroma cells MediumHighHigh







OVARY - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1200.0
overview
Female, age 64
Ovary sample 192
nTPM: 1174
Cell types%
Stromal cells:
70

Smooth muscle cells:
15

Other cell types:
15

overview
Female, age 52
Ovary sample 193
nTPM: 1592.1
Cell types%
Stromal cells:
95

Other cell types:
5

overview
Female, age 80
Ovary sample 308
nTPM: 1339.9
Cell types%
Stromal cells:
70

Smooth muscle cells:
25

Other cell types:
5

N/A
Female, age 7
Ovary sample 3662
nTPM: 1110.3
N/A
Female, age 16
Ovary sample 3663
nTPM: 1359.3
N/A
Female, age 20
Ovary sample 3664
nTPM: 1138
N/A
Female, age 32
Ovary sample 3665
nTPM: 686.1

OVARY - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1270.7
GTEx sample id Sample description nTPM
Ovary
Average nTPM: 1270.7
Samples: 180

Max nTPM: 2552.1
Min nTPM: 376.4
Std nTPM: 357.3
Median nTPM: 1269.1
GTEX-13OVJ-2426-SM-5KM3I 50-59 years, female 2552.1
GTEX-1F52S-2226-SM-7MXVE 60-69 years, female 2267.1
GTEX-1F88E-2026-SM-7MXVP 60-69 years, female 2140.5
GTEX-SN8G-2426-SM-EVR31 50-59 years, female 2017.5
GTEX-RTLS-2326-SM-46MUH 60-69 years, female 1954.8
GTEX-TSE9-2226-SM-4DXUR 60-69 years, female 1922.3
GTEX-1LGRB-2326-SM-CNNPU 50-59 years, female 1915.4
GTEX-OHPK-2426-SM-3MJGH 50-59 years, female 1883.4
GTEX-1LKK1-1626-SM-EVR4Y 50-59 years, female 1859.6
GTEX-1F5PL-1626-SM-7MXTY 40-49 years, female 1850.0
GTEX-15UF6-2026-SM-6LPI3 70-79 years, female 1790.3
GTEX-1RDX4-0826-SM-E9TK7 50-59 years, female 1728.9
GTEX-145MI-2626-SM-5QGQ8 60-69 years, female 1724.0
GTEX-16MT8-2226-SM-6LPK2 60-69 years, female 1723.6
GTEX-X8HC-2726-SM-46MUA 50-59 years, female 1716.6
GTEX-1J1OQ-1626-SM-CE6TB 40-49 years, female 1705.2
GTEX-1A32A-2726-SM-73KVU 50-59 years, female 1698.0
GTEX-1J8JJ-0826-SM-AHZ3F 60-69 years, female 1684.8
GTEX-1EWIQ-2226-SM-7MGXJ 70-79 years, female 1658.8
GTEX-13X6H-1026-SM-5SIBE 50-59 years, female 1656.7
GTEX-11EMC-1726-SM-5H11P 60-69 years, female 1652.0
GTEX-15EOM-1526-SM-68723 20-29 years, female 1639.0
GTEX-1F48J-2326-SM-7MKG3 50-59 years, female 1637.5
GTEX-13QIC-1526-SM-5IJFL 60-69 years, female 1636.0
GTEX-12ZZX-2026-SM-5LZV9 40-49 years, female 1635.9
GTEX-PLZ4-2826-SM-3P617 50-59 years, female 1632.6
GTEX-14BIN-1426-SM-664NI 50-59 years, female 1628.4
GTEX-WYBS-2426-SM-4ONDI 60-69 years, female 1622.6
GTEX-13SLX-2426-SM-664OM 50-59 years, female 1620.9
GTEX-1B933-2126-SM-7MGXR 50-59 years, female 1609.8
GTEX-1OJC4-2026-SM-E6CQW 50-59 years, female 1608.9
GTEX-RU72-2226-SM-46MUE 50-59 years, female 1606.9
GTEX-183WM-1926-SM-72D5F 70-79 years, female 1600.7
GTEX-14PJM-2426-SM-686ZC 50-59 years, female 1600.0
GTEX-1269C-1826-SM-5N9E1 60-69 years, female 1581.4
GTEX-1313W-2726-SM-5P9IX 50-59 years, female 1578.3
GTEX-12WSK-1926-SM-5LZVK 40-49 years, female 1575.0
GTEX-17JCI-2326-SM-7IGPC 60-69 years, female 1566.9
GTEX-16NGA-0426-SM-7LG6K 40-49 years, female 1564.8
GTEX-11I78-1926-SM-59878 50-59 years, female 1539.6
GTEX-1HCUA-1326-SM-9WPP6 50-59 years, female 1534.6
GTEX-11ZVC-1426-SM-5EGGA 50-59 years, female 1527.3
GTEX-WWYW-2726-SM-4MVOP 50-59 years, female 1517.2
GTEX-15DDE-2326-SM-6AJA8 50-59 years, female 1512.9
GTEX-1F6RS-2726-SM-7MKHA 60-69 years, female 1509.4
GTEX-XMD3-2326-SM-4AT5H 50-59 years, female 1501.2
GTEX-PWN1-2426-SM-48TDD 40-49 years, female 1499.5
GTEX-ZVT3-2626-SM-5GU5L 60-69 years, female 1496.8
GTEX-14PKV-1226-SM-6871T 20-29 years, female 1482.8
GTEX-1A8FM-2226-SM-7PC1C 50-59 years, female 1478.6
GTEX-145ME-1226-SM-5SIB6 40-49 years, female 1477.9
GTEX-1MCC2-1026-SM-EVR5I 30-39 years, female 1476.3
GTEX-1LNCM-0926-SM-DHXK5 50-59 years, female 1467.9
GTEX-1QPFJ-1726-SM-EXOJU 30-39 years, female 1466.5
GTEX-14PKU-1226-SM-686ZM 40-49 years, female 1461.2
GTEX-1K9T9-2426-SM-DHXKT 50-59 years, female 1460.5
GTEX-WI4N-2526-SM-4OOSE 40-49 years, female 1453.2
GTEX-13OVI-0726-SM-5L3DD 60-69 years, female 1447.2
GTEX-15DYW-2626-SM-6LPK7 60-69 years, female 1442.4
GTEX-QDT8-2226-SM-EZ6LT 30-39 years, female 1435.1
GTEX-1H1CY-1926-SM-9WG7X 60-69 years, female 1432.4
GTEX-131YS-2226-SM-5P9G8 60-69 years, female 1420.9
GTEX-Y3IK-2026-SM-4YCDG 50-59 years, female 1419.2
GTEX-1HSGN-2426-SM-C1YRI 40-49 years, female 1415.7
GTEX-14PN3-1526-SM-6ETZM 60-69 years, female 1405.7
GTEX-ZVT2-0326-SM-5E44G 50-59 years, female 1403.9
GTEX-12WSJ-1226-SM-5LU91 40-49 years, female 1380.8
GTEX-1QP28-1326-SM-DPRXZ 50-59 years, female 1377.5
GTEX-13O3O-2726-SM-5KM35 60-69 years, female 1372.9
GTEX-RWS6-1026-SM-47JXD 60-69 years, female 1359.0
GTEX-QVJO-3126-SM-COH22 60-69 years, female 1357.9
GTEX-11ZTS-1926-SM-5CVLA 60-69 years, female 1356.1
GTEX-W5WG-0926-SM-4RTX9 50-59 years, female 1348.6
GTEX-P4QT-2426-SM-3NMCL 50-59 years, female 1332.9
GTEX-11XUK-1626-SM-5GU5O 40-49 years, female 1331.9
GTEX-YFC4-2726-SM-5IFJW 40-49 years, female 1327.9
GTEX-ZAJG-2726-SM-5S2MU 50-59 years, female 1317.5
GTEX-1H2FU-2326-SM-9WG7R 60-69 years, female 1315.3
GTEX-S4P3-0926-SM-4AD54 50-59 years, female 1315.0
GTEX-1S5ZU-2326-SM-EAZ5B 20-29 years, female 1314.0
GTEX-13QBU-1526-SM-5LU3W 40-49 years, female 1297.2
GTEX-11P81-1526-SM-5P9GS 30-39 years, female 1293.7
GTEX-14DAQ-2226-SM-5YYAD 60-69 years, female 1291.9
GTEX-1C475-0426-SM-7P8OU 40-49 years, female 1289.3
GTEX-13D11-1126-SM-5KLYS 50-59 years, female 1287.8
GTEX-14AS3-1326-SM-5RQJE 40-49 years, female 1279.5
GTEX-12WSD-2726-SM-59HLR 60-69 years, female 1275.3
GTEX-1LVAM-1826-SM-DHXKR 50-59 years, female 1275.3
GTEX-S32W-1226-SM-4AD67 50-59 years, female 1270.3
GTEX-1QEPI-2726-SM-DPRZ6 60-69 years, female 1269.4
GTEX-1PIEJ-1626-SM-E6CP9 20-29 years, female 1268.7
GTEX-11GSP-0226-SM-5A5KV 60-69 years, female 1265.4
GTEX-T5JW-0426-SM-4DM7M 20-29 years, female 1264.1
GTEX-Y114-1726-SM-4TT7U 50-59 years, female 1263.0
GTEX-13PVR-1226-SM-5RQJ2 60-69 years, female 1254.8
GTEX-18A7A-2626-SM-7LG6L 50-59 years, female 1252.4
GTEX-13W3W-1526-SM-5LU5I 60-69 years, female 1243.6
GTEX-1I4MK-1526-SM-CE6T1 50-59 years, female 1235.2
GTEX-1HBPH-2726-SM-A96TW 40-49 years, female 1226.8
GTEX-13PL7-2326-SM-5L3FY 60-69 years, female 1223.1
GTEX-ZPIC-1426-SM-4WWCP 40-49 years, female 1223.1
GTEX-1MA7W-1426-SM-EV7A1 20-29 years, female 1219.7
GTEX-UJHI-1226-SM-4IHLR 50-59 years, female 1218.3
GTEX-PX3G-2426-SM-48TZZ 20-29 years, female 1215.5
GTEX-13U4I-2126-SM-5LU55 40-49 years, female 1214.5
GTEX-OHPL-2426-SM-48TDN 60-69 years, female 1213.8
GTEX-11EM3-1726-SM-5N9D1 20-29 years, female 1208.2
GTEX-YJ8O-1026-SM-5CVM5 40-49 years, female 1207.8
GTEX-18D9A-0826-SM-718C1 30-39 years, female 1201.2
GTEX-145LS-2326-SM-5TDCY 60-69 years, female 1197.4
GTEX-XYKS-1726-SM-4E3IO 60-69 years, female 1193.4
GTEX-11VI4-1026-SM-5EQM1 40-49 years, female 1175.6
GTEX-T2IS-2026-SM-4DM6W 20-29 years, female 1164.4
GTEX-QCQG-1426-SM-48U22 50-59 years, female 1161.1
GTEX-XUW1-0126-SM-4BOOQ 50-59 years, female 1155.4
GTEX-1GN1W-1426-SM-9JGHP 50-59 years, female 1150.2
GTEX-1AMFI-1426-SM-731EL 50-59 years, female 1147.7
GTEX-PWCY-1326-SM-48TCU 20-29 years, female 1139.2
GTEX-ZZPU-2126-SM-5EGIU 50-59 years, female 1138.7
GTEX-12WSG-1426-SM-5FQUK 50-59 years, female 1131.5
GTEX-1PBJI-2026-SM-DPRYF 20-29 years, female 1126.6
GTEX-XV7Q-1426-SM-4BRWA 40-49 years, female 1121.5
GTEX-ZP4G-0626-SM-4WWF1 20-29 years, female 1121.3
GTEX-ZC5H-2026-SM-5CVN2 40-49 years, female 1119.0
GTEX-11ZTT-1826-SM-5CVLN 60-69 years, female 1114.2
GTEX-1KANC-1026-SM-D3LAA 50-59 years, female 1104.6
GTEX-S341-0726-SM-4AD5R 40-49 years, female 1102.3
GTEX-13VXT-1526-SM-5LU3J 20-29 years, female 1101.1
GTEX-X4EO-2426-SM-4QASD 60-69 years, female 1095.7
GTEX-11DXX-1426-SM-5GIDU 60-69 years, female 1083.5
GTEX-P4PP-2426-SM-3P61L 30-39 years, female 1080.1
GTEX-14BMU-1726-SM-5TDE8 20-29 years, female 1074.5
GTEX-P78B-1926-SM-3P616 40-49 years, female 1074.3
GTEX-131XG-1926-SM-5LZVG 50-59 years, female 1072.5
GTEX-S7SF-1326-SM-4AD4P 20-29 years, female 1072.3
GTEX-1LGOU-1026-SM-DHXL4 20-29 years, female 1039.5
GTEX-X15G-1726-SM-4PQZN 50-59 years, female 1034.9
GTEX-1JN1M-2126-SM-D4P2X 60-69 years, female 1021.2
GTEX-14JG6-0626-SM-68716 30-39 years, female 1011.7
GTEX-XUZC-1026-SM-4BOPY 30-39 years, female 1008.2
GTEX-TMMY-1726-SM-4DXTD 40-49 years, female 991.3
GTEX-1CAMS-2126-SM-7MXTF 40-49 years, female 980.0
GTEX-ZLWG-0926-SM-4WWC3 50-59 years, female 971.4
GTEX-1GZHY-2426-SM-9JGGK 50-59 years, female 965.7
GTEX-1IDJE-1126-SM-A96SO 50-59 years, female 965.5
GTEX-ZYFG-1726-SM-5GZZB 60-69 years, female 959.2
GTEX-1ICG6-1526-SM-C1YQT 70-79 years, female 950.1
GTEX-T6MO-1126-SM-4DM5D 40-49 years, female 949.1
GTEX-146FH-2526-SM-5Q5BP 50-59 years, female 944.7
GTEX-15SDE-0926-SM-6LPIA 50-59 years, female 944.6
GTEX-1AMEY-0926-SM-72D6G 30-39 years, female 925.5
GTEX-U3ZN-1026-SM-4DXTC 30-39 years, female 907.2
GTEX-132AR-1426-SM-5IFF1 50-59 years, female 907.0
GTEX-1JN76-1426-SM-AHZ4F 20-29 years, female 906.6
GTEX-RU1J-0826-SM-46MUU 20-29 years, female 900.8
GTEX-139D8-2426-SM-5KM3A 30-39 years, female 895.4
GTEX-13N11-0526-SM-5IJFI 50-59 years, female 883.9
GTEX-WYVS-1526-SM-4OND4 40-49 years, female 845.4
GTEX-133LE-1226-SM-5IFGC 20-29 years, female 839.9
GTEX-WXYG-1426-SM-4ONCK 50-59 years, female 835.0
GTEX-POMQ-1426-SM-3P61D 20-29 years, female 822.7
GTEX-13FTX-0926-SM-5IFF7 20-29 years, female 821.3
GTEX-Q734-0726-SM-48TZP 40-49 years, female 815.8
GTEX-1IDJU-1126-SM-A9G2S 60-69 years, female 810.0
GTEX-1R9PN-0626-SM-E6CR9 40-49 years, female 794.8
GTEX-TML8-0926-SM-4DXSJ 40-49 years, female 777.7
GTEX-ZYY3-2726-SM-5EGH4 60-69 years, female 755.7
GTEX-1IKOE-2326-SM-A8N99 30-39 years, female 750.6
GTEX-1399S-2126-SM-5J2MH 30-39 years, female 740.5
GTEX-1QP67-1526-SM-E76P4 40-49 years, female 712.0
GTEX-1399U-1726-SM-5P9J4 50-59 years, female 678.2
GTEX-15ER7-2326-SM-7KUN3 20-29 years, female 649.6
GTEX-WEY5-0626-SM-4LMIA 40-49 years, female 594.3
GTEX-1F88F-2126-SM-9KNUK 60-69 years, female 586.3
GTEX-ZV6S-1426-SM-59HKX 40-49 years, female 551.1
GTEX-1LVAN-2726-SM-CNPQG 50-59 years, female 537.1
GTEX-15FZZ-0826-SM-6LLJO 30-39 years, female 514.8
GTEX-1GN1U-2326-SM-9MQK4 50-59 years, female 463.9
GTEX-1GF9X-2426-SM-7SB7W 40-49 years, female 388.3
GTEX-R55G-1526-SM-48FER 40-49 years, female 376.4
Show allShow less

OVARY - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

21.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Ovary
Scaled Tags Per Million: 21.4
FF:10020-101D2 47,75,84 years, female 21.4

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org